Reference sequence (1): 9baci-q41hi5 Identities normalised by aligned length. Colored by: consensus/70% and property |
1 9baci-q41hi5 100.0% MNL-LTDSTL----P-LRIFPA-QRQDYRKTICLYHGWGSSVTKYEDFARTLSEQGFTVIVPELHLHDSRD-RLEAYFNHGVVERHFWPIVFQSIEESVTLVKQL---NVTQADIIWL-G 2 bacha-BH2917 21.8% MIS-VTNETIASI-PALHVVQEELRHEPLPTVFFLHGFTSAKEHNLHHAYLLAQKRIRVILPEALYHGERA-AFEDEQKL---QLSFWEIVLRSIEELPQMKHFVVENGWTASDVIGVTG 3 bacsu-YITV 22.1% MIQ-IENQTVSGI-PFLHIVKEENRHRAVPLVIFIHGFTSAKEHNLHIAYLLAEKGFRAVLPEALHHGERG-EEMAVEEL---AGHFWDIVLNEIEEIGVLKNHFEKEGLIDGGRIGLAG 4 lisin-LIN2363 21.7% MIQ-VENELIAGI-PVLHISNRENAEKELPTIIFYHGFTSQKELYLHYGYLLAQRGFRVVLPDAKLHGERL-QGANPEDQ---ATYFWDVIETNITEFPLITEELIKTGKTDANRIGVGG 5 lismo-LMO2262 22.1% MIQ-VENEQIAGI-PVLHISNSENADKMLPTIIFYHGFTSQKELYLHYGYLLAQRGFRVILPDAKLHGERL-QGANPEDQ---ATFFWDVIETNITEFPLITDELIKAGKTDANRIGVGG 6 oceih-OB1195 22.2% MIG-IYEEQVNQI-PYLHIVKSENYNIELPTIIYFHGFTSAKEQNLPIAYMLAQKGFRVLLPESLYHGERS-NGLTDKQL---QMSFWNIVIQNVQDLEELRSVLLENNWLLEDKLGIAG 7 ecoli-yjfp 24.5% MIE-IESRELADI-PVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYSYFAVALAQAGLRVIMPDAPDHGSRF-SGDAARRL----NQFWQILLQSMQEFTTLRAAIAEENWLLDDRLAVGG 8 shifl-YJFP 24.1% MIE-IESRELADI-PVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYSYFAVALAQAGLRVIMPDAPDHGSRF-SGDEARRL----NQFWQILLQSMQEFTTLRAAIAEENWLLDDRLAVGG 9 salty-YJFP 23.3% MIA-IETRQLAGG-VVLHAFPEGKRAVPLPCVVFYHGFTSSSLVYSYFAVALAQAGFRVVMPDAPEHGARF-GGDSQGRI----HRFWQILHQNMQEFTTLRAAIQAENWLLDGRLAVGG 10 entcc-a0a0h3cfu5 22.1% MIE-IETRRLGNH-EILHAIPAGKSAHPLPVVVFYHGFTSSKLVYSYFAVALAQAGFRVVMPDAPDHGARF-TGDEQVRL----GQFWQILHGSLSEFAGLRDALYQAGLVADQRLSVAG 11 entcl-a0a157v5g4 23.4% MIT-LEMRNLAGG-EVIHACPAGMAEKPLPVIVFYHGFTSSKLVYSYFAVALAEAGFRVIMPDAAEHGARF-HGDDAGRM----LRFWPILRQNFVEFAALREAIIAEGWLEDERLSVAG 12 erwct-q6d134 22.4% MVE-MSLDKLGSGIEAIHAAPLGRREQPLPTIFFFHGYMSSKEVYSYFGYALAQAGFRVILTDAAMHGARY-NGDDAHRL----GHFWDVLQSNIEELPDYVAEYRQRGLIDGERVGVCG 13 yerpe-Y0644 25.8% --------------MWITIAPF----VTLPTIFFYHGYTSSKEVYSYFAYAFAQAGFRTISPDADMHGARF-NGNETQRL----SHFWEILKSNIDELPDLKRHYQQAGLIEGERIGVAG 14 entfa-EF2792 19.6% MKISIRHRYIAKI-PALEVTTEEQKNEALPLIVYYHGWQSAKELSLTQARKLAHEGFRVILPDAMNHGERKTEPISTIPS----ITFWSSIQYNLIEFPVIIHHFHKLGLIKENWIGVGG 15 lacss-q38vr0 20.5% MAL-VLKRQIKGI-PVLEVVAENARHEPLPLVVYYHGWRSAKELVLTQARKLAQAGMRVVLPDALNHGERL-QPVSEIPS----WTFWQSIQTNLAEFSLIIDYWQQLHLIKDDLIGVGG 16 lacpl-LP.1760 18.5% MIK-VTNRHFQDV-PALEVVTTTHLDQPLPLVIFYHGWQSNKELVLTQARKLARKNLRVVLPDAMNHGERH-QIVSQIPS----FTFWNSIQGNLGEFELIVNYYRERKLILNEQIGVGG 17 entfc-q3xxj0 22.0% MNPIILKRSVHHI-PVLEVVLKELREERIPVVIYYHGWQTSKELVLTQGRKIAQQGIRVILPDAMNHGERK-QPVSSIPS----YTFWDSIYGNLFEFDTLIKHLEKRGLLH-DQLAVGG 18 lacpl-LP.2631 24.5% M---VRTTKFGDL-PVLHVFAASQAQTKLPTIIDYHGWTNQTATELGTAYQLVRAGFRVILPTAYLHGSRN-DGTDLDRH---PEHFWSIVGHSVAEFPQLVAALVAAGISDANKIGVMG consensus/100% ................lph.........h.hlh.hHGa.st.......uh.hsptthpsl.sp...HstR..t..t..........FW..l..ph.-...hht.h...th...t.l.l.G consensus/90% M...h..p.h.....hlch......t..lPhlhhhHGatotp.h....uhhluptshRslhP-u..HGtR..t..t..........FW..l.tsh.Eh..hht.h.t.thh.tt.lulhG consensus/80% M...l.pppltth..hLchh..t.tpp.LPhlhaaHGapSsp.h..h.uhhLAptGhRVlhP-A..HGtRh.p..s.........pFWp.l.tshtEhs.lht.h.ttshh.sphluVsG consensus/70% Mh..lppcplssh.PsL+hhsttptpp.LPsllaYHGasSuKtlh.hhAhtLAptGhRVlhPDAh.HGpRh.pssst.p.....hpFWpll.psltEhshlhpth.ptshltsspluVuG 1 9baci-q41hi5 100.0% VSMGGFIASGIAAKQQGSAGIININGSGSFL-FTEQLFRQRDNRAEL-------TMEEKQRLKAYDPVLQA---MSAPTLFVHGQCDTVIPIETQEHCVQQATELN----RDLTFLTYPS 2 bacha-BH2917 21.8% TSMGAITMFGALKKYPWIRAGASLMGSAFYQHFAKKQIEFLEERGVT--LANEIKEDTLVKLKEVDLGEEIDALNNRPLYLWHGERDNVVPFAYSQQLNEQLQQRNY---EQVVFTSDPR 3 bacsu-YITV 22.1% TSMGGITTLGALTAYDWIKAGVSLMGSPNYVELFQQQIDHIQSQGIEIDVPEEKVQQLMKRLELRDLSLQPEKLQQRPLLFWHGAKDKVVPYAPTRKFYDTIKSHYSEQPERLQFIGDEN 4 lisin-LIN2363 21.7% VSMGAITSLGLLGQYDYIKVAVSLMGSAYYVDFAKELSKYALAQGLT---FPYDVDERILALQKYDLTQNITKINNRPLLLWHGKKDDVVPFAYSEKLYQTLVEESLA--DNVEFIIDDN 5 lismo-LMO2262 22.1% VSMGAITSLGLLGLYENIKVAVSLMGSAYYVDFAKELSKYALAQGLT---FPFDVDERILALQKYDLTQNITKINNRPLLLWHGKKDDVVPFAYSEKLYQTLVEESLA--DNVQFIIDDN 6 oceih-OB1195 22.2% TSMGGITTSAALAKYNWVRAAAIMMGSPKITDYANALIGNFKKYGEL-PISDNQLQQLLTEIEAMDLSRHVNTLDQRPVMFWHGDKDPVVPFEHSFLFYQEVKDTYLDQ-QNIKFIKEPG 7 ecoli-yjfp 24.5% ASMGAMTALGITARHPTVRCTASMMGSGYFTSLARSLFPPLIPETAA---QQNEFNNIVAPLAEWEATNHLEQLSDRPLLLWHGLDDDVVPADESLRLQQALSETGRD--KLLTCSWQPG 8 shifl-YJFP 24.1% ASMGAMTALGITARHPTVKCTASMMGSGYFTSLARSLFPPLIPETAA---QQNEFNKIVAPLAEWEATNHLEQLGDRPLLLWHGLDDDVVPADESLRLQQALSETGRD--KLLTCSWQPG 9 salty-YJFP 23.3% ASMGGMTALGIMTRHREVKCGASLMGSGYFTGLARTLFPPLSPQNPA---QQAEFDNIIAPLREWEVTHQLERLADRPLLLWHGQEDDVVPAIETFRLQQALAGAKLD--KHVTCLWAAG 10 entcc-a0a0h3cfu5 22.1% ASMGGMTALGIMARHPEVTSVACLMGSGYFTSLSKTLFPPQ---------DATEID---ALLAEWEVTRALPRLADRPLLLWHGDADDVVPPGETFRLQQALQREGLD--GNLTCLWEAG 11 entcl-a0a157v5g4 23.4% ASMGGMTALGIMTHHPELKCVACLMGSGYFSTLAQTLFP------------SPEFD--TASLAEWDVTHQLAAVADKPLLLWHGDADDVVPPGDTFRLQQALTQSGLA--TNLTCHWQKG 12 erwct-q6d134 22.4% ASLGGMSALGCMARYPWITAVAAFMGSGYFSTLSSTLFPPVPADHEE---NQAVLQALATKLADYDVTTRLDALSNRPLLVWHGEADDVVPAAESARLHQALQARGTL--ANLTYLTEPG 13 yerpe-Y0644 25.8% ASMGGMTALGAFARYPWIRVAADFMGSGYFTSLAHSLFPPRDAGREI---SQQAFERRLAPLADYELTHQLEKITERPLLVWHGEADDVVPAAESARLVQALRTRGGD--NNLTYLTEAG 14 entfa-EF2792 19.6% VSMGGITTSALMTQHPEIQAAACLMGTPYPARYIQRVIQRAKEFAIF---VPKDLPLLLSWVHQYDLSQTPERLQERPMLFWHGTEDEKIPYEDMADFEQLVSGKTYA--RNTQFITEIG 15 lacss-q38vr0 20.5% VSMGGMTTAALLTKHPEIKVAACIMGSPAPLTYARLVRDNVRQHGLQ---QPADLGLLTSWLTAYDLTQQPKALANRPVLFWHGTEDERIPYNQMADFERQIKGQSYA--QNVTFMTGQG 16 lacpl-LP.1760 18.5% YSMGGMTTGALLTHHPEIKAATIIMGTPNLNAYAQLVRKHAQAHAYY---IPSDLALLTSWLDHYDLNLQPETINHRPLLFWHGTEDERIPYSQSRNFFDRVHTAPYA--EQVAFITGYQ 17 entfc-q3xxj0 22.0% VSMGGMTTCALLAKHPHIVAGVCLMGSPAPLEYGKEIVRRASEYNYV---VPKDYFDLISWVKSYDLSLQPEKLAGRPLFFWHGQADEKIPYIQTERFVEKNRHKSYG--KEIVFRSSKT 18 lacpl-LP.2631 24.5% TSMGGITAAGIMATQPTVVAGVSLIGSPEPVAFATDQVAQLPAALQA-KLPAELIEQTYQQLAKFDLSEHPEALAGRPMFFFNGTADQMVPYQYIRDFKHRFKDEPAL--KATVFKRAEG consensus/100% hShGuh...uhht......shh.h.Gos....h.p...................h......lt.h-.s.t.....ttPhhhhpG.tD.hlP......h.p...t......t.h.h....t consensus/90% sSMGuhos.uhhst...lhsss.hhGos...th.p...................h...h..ltth-hs.p..tltt+PhhhaHG.tDphlP.....ph.pth.tt.....t.h.h..t.t consensus/80% sSMGuhTshuhhspas.lpsssshMGSs...thupplh..h...t.........ht.hht.Ltta-lo.p.ptlspRPlhhWHGptDphlPht.p.ch.ptlptpsh...pplthhht.s consensus/70% sSMGGhTshGlhs+as.lpsssslMGSshhsshupplh..h.tts.h.....tphpthhs.LtpaDlopp.ptlssRPLLhWHGptD-VVPhtpohch.ptlpppshs..pplsahhp.s 1 9baci-q41hi5 100.0% INHTVSDQMISDVMVWLNQRF--------- 2 bacha-BH2917 21.8% GDHKVSRAALLESVDWMARQLMPTTTSVRT 3 bacsu-YITV 22.1% ADHKVPRAAVLKTIEWFETYL--------- 4 lisin-LIN2363 21.7% AKHKVSVEGMLQGVSFFEKFL--------- 5 lismo-LMO2262 22.1% AKHKVSVEGMLQGVSFFEKFL--------- 6 oceih-OB1195 22.2% VGHKVSLNGYQEATKWFEKHLL-------- 7 ecoli-yjfp 24.5% VRHRITPEALDAAVTFFRQHL--------- 8 shifl-YJFP 24.1% VRHRITPEALDAAVTFFRQHL--------- 9 salty-YJFP 23.3% VRHRITPEALSATVAFFRQHL--------- 10 entcc-a0a0h3cfu5 22.1% VRHRITPAALDATVDFFRQHL--------- 11 entcl-a0a157v5g4 23.4% VRHRITPEALDATTAFFLRHL--------- 12 erwct-q6d134 22.4% VAHRITPTALQAGADFFQRTL--------- 13 yerpe-Y0644 25.8% IGHKITPTALRAGSDFFTQYL--------- 14 entfa-EF2792 19.6% ERHLVKGETMDLVVDFFKEASKTLE----K 15 lacss-q38vr0 20.5% ERHLVQPALMTTITDFFATHLKIKS----E 16 lacpl-LP.1760 18.5% AKHLVKVPLMNKVANFFDYYLN-------- 17 entfc-q3xxj0 22.0% QRHMVQIPLMEEASTFLAKNLIKKY----K 18 lacpl-LP.2631 24.5% GVHHVPHKIQEAAVAFLETNILK------- consensus/100% ..Hhl...h......ah............. consensus/90% .tHhl...hh.ts.tahtp.h......... consensus/80% htHhlp.thh.tsssahtphL......... consensus/70% scH+lsstshptsssFFpptL......... |
MView 1.56, Copyright © 1997-2013 Nigel P. Brown
#protein: highlight amino acid physicochemical properties hydrophobic => bright-green { A, G, I, L, M, P, V } large hydrophobic => dark-green { F, H, W, Y } cystein => yellow { C } negative charge => bright-blue { D, E } positive charge => bright-red { K, R } polar => purple { N, Q } small alcohol => dull-blue { S , T } any => dark-gray { X } #protein consensus: report conserved physicochemical classes, derived from the Venn diagrams of Taylor W. R. (1986). # The classification of amino acid conservation. #J. Theor. Biol. 119:205-218. alcohol => o { S, T } aliphatic => l { I, L, V } aromatic => a { F, H, W, Y } charged => c { D, E, H, K, R } hydrophobic => h { A, C, F, G, H, I, K, L, M, R, T, V, W, Y } negative => - { D, E } polar => p { C, D, E, H, K, N, Q, R, S, T } positive => + { H, K, R } small => s { A, C, D, G, N, P, S, T, V } tiny => u { A, G, S } turnlike => t { A, C, D, E, G, H, K, N, Q, R, S, T }