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| Title : Rapid whole-genome sequencing for surveillance of Salmonella enterica serovar enteritidis - den Bakker_2014_Emerg.Infect.Dis_20_1306 |
| Author(s) : den Bakker HC , Allard MW , Bopp D , Brown EW , Fontana J , Iqbal Z , Kinney A , Limberger R , Musser KA , Shudt M , Strain E , Wiedmann M , Wolfgang WJ |
| Ref : Emerg Infect Dis , 20 :1306 , 2014 |
| Abstract : den Bakker_2014_Emerg.Infect.Dis_20_1306 |
| ESTHER : den Bakker_2014_Emerg.Infect.Dis_20_1306 |
| PubMedSearch : den Bakker_2014_Emerg.Infect.Dis_20_1306 |
| PubMedID: 25062035 |
| Title : Complete Genome Sequences of Salmonella enterica Serovar Heidelberg Strains Associated with a Multistate Food-Borne Illness Investigation - Evans_2014_Genome.Announc_2_e01154 |
| Author(s) : Evans PS , Luo Y , Muruvanda T , Ayers S , Hiatt B , Hoffman M , Zhao S , Allard MW , Brown EW |
| Ref : Genome Announc , 2 :e01154 , 2014 |
| Abstract : Evans_2014_Genome.Announc_2_e01154 |
| ESTHER : Evans_2014_Genome.Announc_2_e01154 |
| PubMedSearch : Evans_2014_Genome.Announc_2_e01154 |
| PubMedID: 24903882 |
| Title : Comparative genomic analysis and virulence differences in closely related salmonella enterica serotype heidelberg isolates from humans, retail meats, and animals - Hoffmann_2014_Genome.Biol.Evol_6_1046 |
| Author(s) : Hoffmann M , Zhao S , Pettengill J , Luo Y , Monday SR , Abbott J , Ayers SL , Cinar HN , Muruvanda T , Li C , Allard MW , Whichard J , Meng J , Brown EW , McDermott PF |
| Ref : Genome Biol Evol , 6 :1046 , 2014 |
| Abstract : Hoffmann_2014_Genome.Biol.Evol_6_1046 |
| ESTHER : Hoffmann_2014_Genome.Biol.Evol_6_1046 |
| PubMedSearch : Hoffmann_2014_Genome.Biol.Evol_6_1046 |
| PubMedID: 24732280 |
| Title : Fully assembled genome sequence for Salmonella enterica subsp. enterica Serovar Javiana CFSAN001992 - Allard_2013_Genome.Announc_1_e0008113 |
| Author(s) : Allard MW , Muruvanda T , Strain E , Timme R , Luo Y , Wang C , Keys CE , Payne J , Cooper T , Luong K , Song Y , Chin CS , Korlach J , Roberts RJ , Evans P , Musser SM , Brown EW |
| Ref : Genome Announc , 1 :e0008113 , 2013 |
| Abstract : Allard_2013_Genome.Announc_1_e0008113 |
| ESTHER : Allard_2013_Genome.Announc_1_e0008113 |
| PubMedSearch : Allard_2013_Genome.Announc_1_e0008113 |
| PubMedID: 23516208 |
| Title : Complete Genome Sequence of a Multidrug-Resistant Salmonella enterica Serovar Typhimurium var. 5- Strain Isolated from Chicken Breast - Hoffmann_2013_Genome.Announc_1_e01068 |
| Author(s) : Hoffmann M , Muruvanda T , Allard MW , Korlach J , Roberts RJ , Timme R , Payne J , McDermott PF , Evans P , Meng J , Brown EW , Zhao S |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : Hoffmann_2013_Genome.Announc_1_e01068 |
| ESTHER : Hoffmann_2013_Genome.Announc_1_e01068 |
| PubMedSearch : Hoffmann_2013_Genome.Announc_1_e01068 |
| PubMedID: 24356834 |
| Title : Genome Sequences of Salmonella enterica Serovar Heidelberg Isolates Isolated in the United States from a Multistate Outbreak of Human Salmonella Infections - Hoffmann_2013_Genome.Announc_1_e00004 |
| Author(s) : Hoffmann M , Luo Y , Lafon PC , Timme R , Allard MW , McDermott PF , Brown EW , Zhao S |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : Hoffmann_2013_Genome.Announc_1_e00004 |
| ESTHER : Hoffmann_2013_Genome.Announc_1_e00004 |
| PubMedSearch : Hoffmann_2013_Genome.Announc_1_e00004 |
| PubMedID: 23405335 |
| Gene_locus related to this paper: salty-STY1441 |
| Title : On the evolutionary history, population genetics and diversity among isolates of Salmonella Enteritidis PFGE pattern JEGX01.0004 - Allard_2013_PLoS.One_8_e55254 |
| Author(s) : Allard MW , Luo Y , Strain E , Pettengill J , Timme R , Wang C , Li C , Keys CE , Zheng J , Stones R , Wilson MR , Musser SM , Brown EW |
| Ref : PLoS ONE , 8 :e55254 , 2013 |
| Abstract : Allard_2013_PLoS.One_8_e55254 |
| ESTHER : Allard_2013_PLoS.One_8_e55254 |
| PubMedSearch : Allard_2013_PLoS.One_8_e55254 |
| PubMedID: 23383127 |
| Gene_locus related to this paper: salty-STY1441 , salty-ycfp , salen-l6rcw4 |
| Title : Phylogenetic diversity of the enteric pathogen Salmonella enterica subsp. enterica inferred from genome-wide reference-free SNP characters - Timme_2013_Genome.Biol.Evol_5_2109 |
| Author(s) : Timme RE , Pettengill JB , Allard MW , Strain E , Barrangou R , Wehnes C , Van Kessel JS , Karns JS , Musser SM , Brown EW |
| Ref : Genome Biol Evol , 5 :2109 , 2013 |
| Abstract : Timme_2013_Genome.Biol.Evol_5_2109 |
| ESTHER : Timme_2013_Genome.Biol.Evol_5_2109 |
| PubMedSearch : Timme_2013_Genome.Biol.Evol_5_2109 |
| PubMedID: 24158624 |
| Gene_locus related to this paper: salty-STY1441 , salty-ycfp |
| Title : High resolution clustering of Salmonella enterica serovar Montevideo strains using a next-generation sequencing approach - Allard_2012_BMC.Genomics_13_32 |
| Author(s) : Allard MW , Luo Y , Strain E , Li C , Keys CE , Son I , Stones R , Musser SM , Brown EW |
| Ref : BMC Genomics , 13 :32 , 2012 |
| Abstract : Allard_2012_BMC.Genomics_13_32 |
| ESTHER : Allard_2012_BMC.Genomics_13_32 |
| PubMedSearch : Allard_2012_BMC.Genomics_13_32 |
| PubMedID: 22260654 |
| Gene_locus related to this paper: salen-OPDB , salti-q8z717 , salty-DLHH , salty-ENTF , salty-FES , salty-IROD , salty-IROE , salty-PLDB , salty-STY1441 , salty-yafa , salty-YBFF , salty-ycfp , salty-YFBB , salty-YQIA |
| Title : Genome sequences of five Salmonella enterica serovar Heidelberg isolates associated with a 2011 multistate outbreak in the United States - Hoffmann_2012_J.Bacteriol_194_3274 |
| Author(s) : Hoffmann M , Zhao S , Luo Y , Li C , Folster JP , Whichard J , Allard MW , Brown EW , McDermott PF |
| Ref : Journal of Bacteriology , 194 :3274 , 2012 |
| Abstract : Hoffmann_2012_J.Bacteriol_194_3274 |
| ESTHER : Hoffmann_2012_J.Bacteriol_194_3274 |
| PubMedSearch : Hoffmann_2012_J.Bacteriol_194_3274 |
| PubMedID: 22628505 |
| Gene_locus related to this paper: salty-STY1441 , salty-YFBB |
| Title : Draft genome sequences of 21 Salmonella enterica serovar enteritidis strains - Timme_2012_J.Bacteriol_194_5994 |
| Author(s) : Timme RE , Allard MW , Luo Y , Strain E , Pettengill J , Wang C , Li C , Keys CE , Zheng J , Stones R , Wilson MR , Musser SM , Brown EW |
| Ref : Journal of Bacteriology , 194 :5994 , 2012 |
| Abstract : Timme_2012_J.Bacteriol_194_5994 |
| ESTHER : Timme_2012_J.Bacteriol_194_5994 |
| PubMedSearch : Timme_2012_J.Bacteriol_194_5994 |
| PubMedID: 23045502 |
| Gene_locus related to this paper: salty-STY1441 |
| Title : Draft genome sequences of six Escherichia coli isolates from the stepwise model of emergence of Escherichia coli O157:H7 - Rump_2011_J.Bacteriol_193_2058 |
| Author(s) : Rump LV , Strain EA , Cao G , Allard MW , Fischer M , Brown EW , Gonzalez-Escalona N |
| Ref : Journal of Bacteriology , 193 :2058 , 2011 |
| Abstract : Rump_2011_J.Bacteriol_193_2058 |
| ESTHER : Rump_2011_J.Bacteriol_193_2058 |
| PubMedSearch : Rump_2011_J.Bacteriol_193_2058 |
| PubMedID: 21317333 |
| Gene_locus related to this paper: ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-yafa , ecoli-ycfp , ecoli-yeiG , ecoli-yhet , ecoli-yqia , ecoli-Z0347 , ecoli-Z1930 , ecoli-Z2445 |
| Title : Identification of a salmonellosis outbreak by means of molecular sequencing - |
| Author(s) : Lienau EK , Strain E , Wang C , Zheng J , Ottesen AR , Keys CE , Hammack TS , Musser SM , Brown EW , Allard MW , Cao G , Meng J , Stones R |
| Ref : N Engl J Med , 364 :981 , 2011 |
| PubMedID: 21345093 |
| Gene_locus related to this paper: salen-OPDB , salti-q8z717 , salty-DLHH , salty-ENTF , salty-FES , salty-IROD , salty-IROE , salty-PLDB , salty-STM4506 , salty-STY1441 , salty-yafa , salty-YBFF , salty-ycfp , salty-YFBB , salty-YHET , salty-YQIA |