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| Title : Genome analysis of three Pneumocystis species reveals adaptation mechanisms to life exclusively in mammalian hosts - Ma_2016_Nat.Commun_7_10740 |
| Author(s) : Ma L , Chen Z , Huang da W , Kutty G , Ishihara M , Wang H , Abouelleil A , Bishop L , Davey E , Deng R , Deng X , Fan L , Fantoni G , FitzGerald M , Gogineni E , Goldberg JM , Handley G , Hu X , Huber C , Jiao X , Jones K , Levin JZ , Liu Y , Macdonald P , Melnikov A , Raley C , Sassi M , Sherman BT , Song X , Sykes S , Tran B , Walsh L , Xia Y , Yang J , Young S , Zeng Q , Zheng X , Stephens R , Nusbaum C , Birren BW , Azadi P , Lempicki RA , Cuomo CA , Kovacs JA |
| Ref : Nat Commun , 7 :10740 , 2016 |
| Abstract : Ma_2016_Nat.Commun_7_10740 |
| ESTHER : Ma_2016_Nat.Commun_7_10740 |
| PubMedSearch : Ma_2016_Nat.Commun_7_10740 |
| PubMedID: 26899007 |
| Gene_locus related to this paper: pnec8-a0a0w4zi95 , pnemu-m7nra0 , pnej8-l0pgn2 , pnemu-m7nsb0 |
| Title : Draft Genome Sequence of the Cellulolytic Fungus Chaetomium globosum - Cuomo_2015_Genome.Announc_3_E00021 |
| Author(s) : Cuomo CA , Untereiner WA , Ma LJ , Grabherr M , Birren BW |
| Ref : Genome Announc , 3 : , 2015 |
| Abstract : Cuomo_2015_Genome.Announc_3_E00021 |
| ESTHER : Cuomo_2015_Genome.Announc_3_E00021 |
| PubMedSearch : Cuomo_2015_Genome.Announc_3_E00021 |
| PubMedID: 25720678 |
| Gene_locus related to this paper: chagb-q2h5j0 , chagb-q2h6w8 , chagb-q2gpq3 , chagb-q2gyn8 , chagb-q2h2d0 |
| Title : Genome Sequence of the Pathogenic Fungus Sporothrix schenckii (ATCC 58251) - Cuomo_2014_Genome.Announc_2_E00446 |
| Author(s) : Cuomo CA , Rodriguez-Del Valle N , Perez-Sanchez L , Abouelleil A , Goldberg J , Young S , Zeng Q , Birren BW |
| Ref : Genome Announc , 2 :E0044614 , 2014 |
| Abstract : Cuomo_2014_Genome.Announc_2_E00446 |
| ESTHER : Cuomo_2014_Genome.Announc_2_E00446 |
| PubMedSearch : Cuomo_2014_Genome.Announc_2_E00446 |
| PubMedID: 24855299 |
| Gene_locus related to this paper: spos1-u7q5l6 , spos1-u7phh2 , spos1-u7pxz2 , spos1-u7q332 , spos1-u7pw92 |
| Title : Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011 - Grad_2012_Proc.Natl.Acad.Sci.U.S.A_109_3065 |
| Author(s) : Grad YH , Lipsitch M , Feldgarden M , Arachchi HM , Cerqueira GC , FitzGerald M , Godfrey P , Haas BJ , Murphy CI , Russ C , Sykes S , Walker BJ , Wortman JR , Young S , Zeng Q , Abouelleil A , Bochicchio J , Chauvin S , Desmet T , Gujja S , McCowan C , Montmayeur A , Steelman S , Frimodt-Moller J , Petersen AM , Struve C , Krogfelt KA , Bingen E , Weill FX , Lander ES , Nusbaum C , Birren BW , Hung DT , Hanage WP |
| Ref : Proc Natl Acad Sci U S A , 109 :3065 , 2012 |
| Abstract : Grad_2012_Proc.Natl.Acad.Sci.U.S.A_109_3065 |
| ESTHER : Grad_2012_Proc.Natl.Acad.Sci.U.S.A_109_3065 |
| PubMedSearch : Grad_2012_Proc.Natl.Acad.Sci.U.S.A_109_3065 |
| PubMedID: 22315421 |
| Gene_locus related to this paper: ecoli-fes , ecoli-MCMK , ecoli-yaim , ecoli-ycfp , ecoli-YFBB , ecoli-yhet , ecoli-yiel , ecoli-yqia , ecoli-YfhR |
| Title : High quality draft genome sequence of Segniliparus rugosus CDC 945(T)= (ATCC BAA-974(T)) - Earl_2011_Stand.Genomic.Sci_5_389 |
| Author(s) : Earl AM , Desjardins CA , Fitzgerald MG , Arachchi HM , Zeng Q , Mehta T , Griggs A , Birren BW , Toney NC , Carr J , Posey J , Butler WR |
| Ref : Stand Genomic Sci , 5 :389 , 2011 |
| Abstract : Earl_2011_Stand.Genomic.Sci_5_389 |
| ESTHER : Earl_2011_Stand.Genomic.Sci_5_389 |
| PubMedSearch : Earl_2011_Stand.Genomic.Sci_5_389 |
| PubMedID: 22675588 |
| Gene_locus related to this paper: 9acto-e5xtw5 , 9acto-e5xpt7 , 9acto-e5xpt8 , 9acto-e5xue1 , 9acto-e5xr49 , 9actn-e5xql0 |
| Title : Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts - D'Souza_2011_MBio_2_e00342 |
| Author(s) : D'Souza CA , Kronstad JW , Taylor G , Warren R , Yuen M , Hu G , Jung WH , Sham A , Kidd SE , Tangen K , Lee N , Zeilmaker T , Sawkins J , McVicker G , Shah S , Gnerre S , Griggs A , Zeng Q , Bartlett K , Li W , Wang X , Heitman J , Stajich JE , Fraser JA , Meyer W , Carter D , Schein J , Krzywinski M , Kwon-Chung KJ , Varma A , Wang J , Brunham R , Fyfe M , Ouellette BF , Siddiqui A , Marra M , Jones S , Holt R , Birren BW , Galagan JE , Cuomo CA |
| Ref : MBio , 2 :e00342 , 2011 |
| Abstract : D'Souza_2011_MBio_2_e00342 |
| ESTHER : D'Souza_2011_MBio_2_e00342 |
| PubMedSearch : D'Souza_2011_MBio_2_e00342 |
| PubMedID: 21304167 |
| Gene_locus related to this paper: crygw-e6qy09 , crygw-e6r2n3 , crygw-e6r7g6 , crygw-e6rbd6 , crygw-e6rcm3 , crygw-e6rg44 , cryne-q5ka03 , cryne-q5km63 , cryne-q5knq0 , cryne-q55va3 , crynj-q5kpe0 , crygr-a0a095cfy5 , crygw-kex1 |
| Title : Population genomic sequencing of Coccidioides fungi reveals recent hybridization and transposon control - Neafsey_2010_Genome.Res_20_938 |
| Author(s) : Neafsey DE , Barker BM , Sharpton TJ , Stajich JE , Park DJ , Whiston E , Hung CY , McMahan C , White J , Sykes S , Heiman D , Young S , Zeng Q , Abouelleil A , Aftuck L , Bessette D , Brown A , FitzGerald M , Lui A , Macdonald JP , Priest M , Orbach MJ , Galgiani JN , Kirkland TN , Cole GT , Birren BW , Henn MR , Taylor JW , Rounsley SD |
| Ref : Genome Res , 20 :938 , 2010 |
| Abstract : Neafsey_2010_Genome.Res_20_938 |
| ESTHER : Neafsey_2010_Genome.Res_20_938 |
| PubMedSearch : Neafsey_2010_Genome.Res_20_938 |
| PubMedID: 20516208 |
| Gene_locus related to this paper: cocp7-c5p2u8 , cocp7-c5p5s7 , cocp7-c5pe69 , cocp7-c5pf68 , cocp7-c5pgk6 , cocim-j3ka92 , cocp7-c5phc6 , cocps-e9d3i4 , cocit-a0a0j8rde7 , cocps-e9csw0 , cocps-e9dgm8 |
| Title : Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication - Ma_2009_PLoS.Genet_5_e1000549 |
| Author(s) : Ma LJ , Ibrahim AS , Skory C , Grabherr MG , Burger G , Butler M , Elias M , Idnurm A , Lang BF , Sone T , Abe A , Calvo SE , Corrochano LM , Engels R , Fu J , Hansberg W , Kim JM , Kodira CD , Koehrsen MJ , Liu B , Miranda-Saavedra D , O'Leary S , Ortiz-Castellanos L , Poulter R , Rodriguez-Romero J , Ruiz-Herrera J , Shen YQ , Zeng Q , Galagan J , Birren BW , Cuomo CA , Wickes BL |
| Ref : PLoS Genet , 5 :e1000549 , 2009 |
| Abstract : Ma_2009_PLoS.Genet_5_e1000549 |
| ESTHER : Ma_2009_PLoS.Genet_5_e1000549 |
| PubMedSearch : Ma_2009_PLoS.Genet_5_e1000549 |
| PubMedID: 19578406 |
| Title : Human chromosome 11 DNA sequence and analysis including novel gene identification - Taylor_2006_Nature_440_497 |
| Author(s) : Taylor TD , Noguchi H , Totoki Y , Toyoda A , Kuroki Y , Dewar K , Lloyd C , Itoh T , Takeda T , Kim DW , She X , Barlow KF , Bloom T , Bruford E , Chang JL , Cuomo CA , Eichler E , Fitzgerald MG , Jaffe DB , LaButti K , Nicol R , Park HS , Seaman C , Sougnez C , Yang X , Zimmer AR , Zody MC , Birren BW , Nusbaum C , Fujiyama A , Hattori M , Rogers J , Lander ES , Sakaki Y |
| Ref : Nature , 440 :497 , 2006 |
| Abstract : Taylor_2006_Nature_440_497 |
| ESTHER : Taylor_2006_Nature_440_497 |
| PubMedSearch : Taylor_2006_Nature_440_497 |
| PubMedID: 16554811 |
| Gene_locus related to this paper: human-PRCP |
| Title : DNA sequence and analysis of human chromosome 18 - Nusbaum_2005_Nature_437_551 |
| Author(s) : Nusbaum C , Zody MC , Borowsky ML , Kamal M , Kodira CD , Taylor TD , Whittaker CA , Chang JL , Cuomo CA , Dewar K , Fitzgerald MG , Yang X , Abouelleil A , Allen NR , Anderson S , Bloom T , Bugalter B , Butler J , Cook A , Decaprio D , Engels R , Garber M , Gnirke A , Hafez N , Hall JL , Norman CH , Itoh T , Jaffe DB , Kuroki Y , Lehoczky J , Lui A , Macdonald P , Mauceli E , Mikkelsen TS , Naylor JW , Nicol R , Nguyen C , Noguchi H , O'Leary SB , O'Neill K , Piqani B , Smith CL , Talamas JA , Topham K , Totoki Y , Toyoda A , Wain HM , Young SK , Zeng Q , Zimmer AR , Fujiyama A , Hattori M , Birren BW , Sakaki Y , Lander ES |
| Ref : Nature , 437 :551 , 2005 |
| Abstract : Nusbaum_2005_Nature_437_551 |
| ESTHER : Nusbaum_2005_Nature_437_551 |
| PubMedSearch : Nusbaum_2005_Nature_437_551 |
| PubMedID: 16177791 |
| Gene_locus related to this paper: human-LIPG |
| Title : Mapping of Myxococcus xanthus social motility dsp mutations to the dif genes - Lancero_2002_J.Bacteriol_184_1462 |
| Author(s) : Lancero H , Brofft JE , Downard J , Birren BW , Nusbaum C , Naylor J , Shi W , Shimkets LJ |
| Ref : Journal of Bacteriology , 184 :1462 , 2002 |
| Abstract : Lancero_2002_J.Bacteriol_184_1462 |
| ESTHER : Lancero_2002_J.Bacteriol_184_1462 |
| PubMedSearch : Lancero_2002_J.Bacteriol_184_1462 |
| PubMedID: 11844780 |
| Gene_locus related to this paper: myxxa-Q8VQX5 |