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| Title : Simultaneous Emergence of Multidrug-Resistant Candida auris on 3 Continents Confirmed by Whole-Genome Sequencing and Epidemiological Analyses - Lockhart_2017_Clin.Infect.Dis_64_134 |
| Author(s) : Lockhart SR , Etienne KA , Vallabhaneni S , Farooqi J , Chowdhary A , Govender NP , Colombo AL , Calvo B , Cuomo CA , Desjardins CA , Berkow EL , Castanheira M , Magobo RE , Jabeen K , Asghar RJ , Meis JF , Jackson B , Chiller T , Litvintseva AP |
| Ref : Clin Infect Dis , 64 :134 , 2017 |
| Abstract : Lockhart_2017_Clin.Infect.Dis_64_134 |
| ESTHER : Lockhart_2017_Clin.Infect.Dis_64_134 |
| PubMedSearch : Lockhart_2017_Clin.Infect.Dis_64_134 |
| PubMedID: 27988485 |
| Gene_locus related to this paper: canar-a0a2h1a5v8 |
| Title : Exploring the genomic diversity of black yeasts and relatives (Chaetothyriales, Ascomycota) - Teixeira_2017_Stud.Mycol_86_1 |
| Author(s) : Teixeira MM , Moreno LF , Stielow BJ , Muszewska A , Hainaut M , Gonzaga L , Abouelleil A , Patane JS , Priest M , Souza R , Young S , Ferreira KS , Zeng Q , da Cunha MM , Gladki A , Barker B , Vicente VA , de Souza EM , Almeida S , Henrissat B , Vasconcelos AT , Deng S , Voglmayr H , Moussa TA , Gorbushina A , Felipe MS , Cuomo CA , de Hoog GS |
| Ref : Stud Mycol , 86 :1 , 2017 |
| Abstract : Teixeira_2017_Stud.Mycol_86_1 |
| ESTHER : Teixeira_2017_Stud.Mycol_86_1 |
| PubMedSearch : Teixeira_2017_Stud.Mycol_86_1 |
| PubMedID: 28348446 |
| Gene_locus related to this paper: exodn-h6btr2 , exodn-h6c4y3 |
| Title : Genome analysis of three Pneumocystis species reveals adaptation mechanisms to life exclusively in mammalian hosts - Ma_2016_Nat.Commun_7_10740 |
| Author(s) : Ma L , Chen Z , Huang da W , Kutty G , Ishihara M , Wang H , Abouelleil A , Bishop L , Davey E , Deng R , Deng X , Fan L , Fantoni G , FitzGerald M , Gogineni E , Goldberg JM , Handley G , Hu X , Huber C , Jiao X , Jones K , Levin JZ , Liu Y , Macdonald P , Melnikov A , Raley C , Sassi M , Sherman BT , Song X , Sykes S , Tran B , Walsh L , Xia Y , Yang J , Young S , Zeng Q , Zheng X , Stephens R , Nusbaum C , Birren BW , Azadi P , Lempicki RA , Cuomo CA , Kovacs JA |
| Ref : Nat Commun , 7 :10740 , 2016 |
| Abstract : Ma_2016_Nat.Commun_7_10740 |
| ESTHER : Ma_2016_Nat.Commun_7_10740 |
| PubMedSearch : Ma_2016_Nat.Commun_7_10740 |
| PubMedID: 26899007 |
| Gene_locus related to this paper: pnec8-a0a0w4zi95 , pnemu-m7nra0 , pnej8-l0pgn2 , pnemu-m7nsb0 |
| Title : Sex and parasites: genomic and transcriptomic analysis of Microbotryum lychnidis-dioicae, the biotrophic and plant-castrating anther smut fungus - Perlin_2015_BMC.Genomics_16_461 |
| Author(s) : Perlin MH , Amselem J , Fontanillas E , Toh SS , Chen Z , Goldberg J , Duplessis S , Henrissat B , Young S , Zeng Q , Aguileta G , Petit E , Badouin H , Andrews J , Razeeq D , Gabaldon T , Quesneville H , Giraud T , Hood ME , Schultz DJ , Cuomo CA |
| Ref : BMC Genomics , 16 :461 , 2015 |
| Abstract : Perlin_2015_BMC.Genomics_16_461 |
| ESTHER : Perlin_2015_BMC.Genomics_16_461 |
| PubMedSearch : Perlin_2015_BMC.Genomics_16_461 |
| PubMedID: 26076695 |
| Gene_locus related to this paper: ustv1-u5h5e5 |
| Title : The Dynamic Genome and Transcriptome of the Human Fungal Pathogen Blastomyces and Close Relative Emmonsia - Munoz_2015_PLoS.Genet_11_e1005493 |
| Author(s) : Munoz JF , Gauthier GM , Desjardins CA , Gallo JE , Holder J , Sullivan TD , Marty AJ , Carmen JC , Chen Z , Ding L , Gujja S , Magrini V , Misas E , Mitreva M , Priest M , Saif S , Whiston EA , Young S , Zeng Q , Goldman WE , Mardis ER , Taylor JW , McEwen JG , Clay OK , Klein BS , Cuomo CA |
| Ref : PLoS Genet , 11 :e1005493 , 2015 |
| Abstract : Munoz_2015_PLoS.Genet_11_e1005493 |
| ESTHER : Munoz_2015_PLoS.Genet_11_e1005493 |
| PubMedSearch : Munoz_2015_PLoS.Genet_11_e1005493 |
| PubMedID: 26439490 |
| Gene_locus related to this paper: ajedr-c5gqv9 , 9euro-a0a2b7ztc4 , 9euro-a0a2b7wr51 , blags-a0a179v0z0 , 9euro-a0a0h1bel0 , blags-a0a179udh1 , ajedr-kex1 , ajedr-cbpya |
| Title : Draft Genome Sequence of the Cellulolytic Fungus Chaetomium globosum - Cuomo_2015_Genome.Announc_3_E00021 |
| Author(s) : Cuomo CA , Untereiner WA , Ma LJ , Grabherr M , Birren BW |
| Ref : Genome Announc , 3 : , 2015 |
| Abstract : Cuomo_2015_Genome.Announc_3_E00021 |
| ESTHER : Cuomo_2015_Genome.Announc_3_E00021 |
| PubMedSearch : Cuomo_2015_Genome.Announc_3_E00021 |
| PubMedID: 25720678 |
| Gene_locus related to this paper: chagb-q2h5j0 , chagb-q2h6w8 , chagb-q2gpq3 , chagb-q2gyn8 , chagb-q2h2d0 |
| Title : Genome Sequence of the Pathogenic Fungus Sporothrix schenckii (ATCC 58251) - Cuomo_2014_Genome.Announc_2_E00446 |
| Author(s) : Cuomo CA , Rodriguez-Del Valle N , Perez-Sanchez L , Abouelleil A , Goldberg J , Young S , Zeng Q , Birren BW |
| Ref : Genome Announc , 2 :E0044614 , 2014 |
| Abstract : Cuomo_2014_Genome.Announc_2_E00446 |
| ESTHER : Cuomo_2014_Genome.Announc_2_E00446 |
| PubMedSearch : Cuomo_2014_Genome.Announc_2_E00446 |
| PubMedID: 24855299 |
| Gene_locus related to this paper: spos1-u7q5l6 , spos1-u7phh2 , spos1-u7pxz2 , spos1-u7q332 , spos1-u7pw92 |
| Title : Comparative genomic and transcriptomic analysis of wangiella dermatitidis, a major cause of phaeohyphomycosis and a model black yeast human pathogen - Chen_2014_G3.(Bethesda)_4_561 |
| Author(s) : Chen Z , Martinez DA , Gujja S , Sykes SM , Zeng Q , Szaniszlo PJ , Wang Z , Cuomo CA |
| Ref : G3 (Bethesda) , 4 :561 , 2014 |
| Abstract : Chen_2014_G3.(Bethesda)_4_561 |
| ESTHER : Chen_2014_G3.(Bethesda)_4_561 |
| PubMedSearch : Chen_2014_G3.(Bethesda)_4_561 |
| PubMedID: 24496724 |
| Gene_locus related to this paper: exodn-h6bmp3 , exodn-h6btr2 , exodn-h6c4y3 |
| Title : Genome variation in Cryptococcus gattii, an emerging pathogen of immunocompetent hosts - D'Souza_2011_MBio_2_e00342 |
| Author(s) : D'Souza CA , Kronstad JW , Taylor G , Warren R , Yuen M , Hu G , Jung WH , Sham A , Kidd SE , Tangen K , Lee N , Zeilmaker T , Sawkins J , McVicker G , Shah S , Gnerre S , Griggs A , Zeng Q , Bartlett K , Li W , Wang X , Heitman J , Stajich JE , Fraser JA , Meyer W , Carter D , Schein J , Krzywinski M , Kwon-Chung KJ , Varma A , Wang J , Brunham R , Fyfe M , Ouellette BF , Siddiqui A , Marra M , Jones S , Holt R , Birren BW , Galagan JE , Cuomo CA |
| Ref : MBio , 2 :e00342 , 2011 |
| Abstract : D'Souza_2011_MBio_2_e00342 |
| ESTHER : D'Souza_2011_MBio_2_e00342 |
| PubMedSearch : D'Souza_2011_MBio_2_e00342 |
| PubMedID: 21304167 |
| Gene_locus related to this paper: crygw-e6qy09 , crygw-e6r2n3 , crygw-e6r7g6 , crygw-e6rbd6 , crygw-e6rcm3 , crygw-e6rg44 , cryne-q5ka03 , cryne-q5km63 , cryne-q5knq0 , cryne-q55va3 , crynj-q5kpe0 , crygr-a0a095cfy5 , crygw-kex1 |
| Title : Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication - Ma_2009_PLoS.Genet_5_e1000549 |
| Author(s) : Ma LJ , Ibrahim AS , Skory C , Grabherr MG , Burger G , Butler M , Elias M , Idnurm A , Lang BF , Sone T , Abe A , Calvo SE , Corrochano LM , Engels R , Fu J , Hansberg W , Kim JM , Kodira CD , Koehrsen MJ , Liu B , Miranda-Saavedra D , O'Leary S , Ortiz-Castellanos L , Poulter R , Rodriguez-Romero J , Ruiz-Herrera J , Shen YQ , Zeng Q , Galagan J , Birren BW , Cuomo CA , Wickes BL |
| Ref : PLoS Genet , 5 :e1000549 , 2009 |
| Abstract : Ma_2009_PLoS.Genet_5_e1000549 |
| ESTHER : Ma_2009_PLoS.Genet_5_e1000549 |
| PubMedSearch : Ma_2009_PLoS.Genet_5_e1000549 |
| PubMedID: 19578406 |
| Title : Human chromosome 11 DNA sequence and analysis including novel gene identification - Taylor_2006_Nature_440_497 |
| Author(s) : Taylor TD , Noguchi H , Totoki Y , Toyoda A , Kuroki Y , Dewar K , Lloyd C , Itoh T , Takeda T , Kim DW , She X , Barlow KF , Bloom T , Bruford E , Chang JL , Cuomo CA , Eichler E , Fitzgerald MG , Jaffe DB , LaButti K , Nicol R , Park HS , Seaman C , Sougnez C , Yang X , Zimmer AR , Zody MC , Birren BW , Nusbaum C , Fujiyama A , Hattori M , Rogers J , Lander ES , Sakaki Y |
| Ref : Nature , 440 :497 , 2006 |
| Abstract : Taylor_2006_Nature_440_497 |
| ESTHER : Taylor_2006_Nature_440_497 |
| PubMedSearch : Taylor_2006_Nature_440_497 |
| PubMedID: 16554811 |
| Gene_locus related to this paper: human-PRCP |
| Title : DNA sequence and analysis of human chromosome 18 - Nusbaum_2005_Nature_437_551 |
| Author(s) : Nusbaum C , Zody MC , Borowsky ML , Kamal M , Kodira CD , Taylor TD , Whittaker CA , Chang JL , Cuomo CA , Dewar K , Fitzgerald MG , Yang X , Abouelleil A , Allen NR , Anderson S , Bloom T , Bugalter B , Butler J , Cook A , Decaprio D , Engels R , Garber M , Gnirke A , Hafez N , Hall JL , Norman CH , Itoh T , Jaffe DB , Kuroki Y , Lehoczky J , Lui A , Macdonald P , Mauceli E , Mikkelsen TS , Naylor JW , Nicol R , Nguyen C , Noguchi H , O'Leary SB , O'Neill K , Piqani B , Smith CL , Talamas JA , Topham K , Totoki Y , Toyoda A , Wain HM , Young SK , Zeng Q , Zimmer AR , Fujiyama A , Hattori M , Birren BW , Sakaki Y , Lander ES |
| Ref : Nature , 437 :551 , 2005 |
| Abstract : Nusbaum_2005_Nature_437_551 |
| ESTHER : Nusbaum_2005_Nature_437_551 |
| PubMedSearch : Nusbaum_2005_Nature_437_551 |
| PubMedID: 16177791 |
| Gene_locus related to this paper: human-LIPG |