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| Title : Crystal structure analysis, covalent docking, and molecular dynamics calculations reveal a conformational switch in PhaZ7 PHB depolymerase - Kellici_2017_Proteins_85_1351 |
| Author(s) : Kellici TF , Mavromoustakos T , Jendrossek D , Papageorgiou AC |
| Ref : Proteins , 85 :1351 , 2017 |
| Abstract : Kellici_2017_Proteins_85_1351 |
| ESTHER : Kellici_2017_Proteins_85_1351 |
| PubMedSearch : Kellici_2017_Proteins_85_1351 |
| PubMedID: 28370478 |
| Gene_locus related to this paper: psele-PHAZ7 |
| Title : Comparative Proteome Analysis Reveals Four Novel Polyhydroxybutyrate (PHB) Granule-Associated Proteins in Ralstonia eutropha H16 - Sznajder_2015_Appl.Environ.Microbiol_81_1847 |
| Author(s) : Sznajder A , Pfeiffer D , Jendrossek D |
| Ref : Applied Environmental Microbiology , 81 :1847 , 2015 |
| Abstract : Sznajder_2015_Appl.Environ.Microbiol_81_1847 |
| ESTHER : Sznajder_2015_Appl.Environ.Microbiol_81_1847 |
| PubMedSearch : Sznajder_2015_Appl.Environ.Microbiol_81_1847 |
| PubMedID: 25548058 |
| Title : Biochemical analysis and structure determination of Paucimonas lemoignei poly(3-hydroxybutyrate) (PHB) depolymerase PhaZ7 muteins reveal the PHB binding site and details of substrate-enzyme interactions - Jendrossek_2013_Mol.Microbiol_90_649 |
| Author(s) : Jendrossek D , Hermawan S , Subedi B , Papageorgiou AC |
| Ref : Molecular Microbiology , 90 :649 , 2013 |
| Abstract : Jendrossek_2013_Mol.Microbiol_90_649 |
| ESTHER : Jendrossek_2013_Mol.Microbiol_90_649 |
| PubMedSearch : Jendrossek_2013_Mol.Microbiol_90_649 |
| PubMedID: 24007310 |
| Gene_locus related to this paper: psele-PHAZ7 |
| Title : Biochemical characterization of a new type of intracellular PHB depolymerase from Rhodospirillum rubrum with high hydrolytic activity on native PHB granules - Sznajder_2011_Appl.Microbiol.Biotechnol_89_1487 |
| Author(s) : Sznajder A , Jendrossek D |
| Ref : Applied Microbiology & Biotechnology , 89 :1487 , 2011 |
| Abstract : Sznajder_2011_Appl.Microbiol.Biotechnol_89_1487 |
| ESTHER : Sznajder_2011_Appl.Microbiol.Biotechnol_89_1487 |
| PubMedSearch : Sznajder_2011_Appl.Microbiol.Biotechnol_89_1487 |
| PubMedID: 21274528 |
| Title : The structure of PhaZ7 at atomic (1.2 A) resolution reveals details of the active site and suggests a substrate-binding mode - Wakadkar_2010_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_66_648 |
| Author(s) : Wakadkar S , Hermawan S , Jendrossek D , Papageorgiou AC |
| Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 66 :648 , 2010 |
| Abstract : Wakadkar_2010_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_66_648 |
| ESTHER : Wakadkar_2010_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_66_648 |
| PubMedSearch : Wakadkar_2010_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_66_648 |
| PubMedID: 20516591 |
| Gene_locus related to this paper: psele-PHAZ7 |
| Title : Polyhydroxyalkanoate granules are complex subcellular organelles (carbonosomes) - |
| Author(s) : Jendrossek D |
| Ref : Journal of Bacteriology , 191 :3195 , 2009 |
| PubMedID: 19270094 |
| Title : Structural basis of poly(3-hydroxybutyrate) hydrolysis by PhaZ7 depolymerase from Paucimonas lemoignei - Papageorgiou_2008_J.Mol.Biol_382_1184 |
| Author(s) : Papageorgiou AC , Hermawan S , Singh CB , Jendrossek D |
| Ref : Journal of Molecular Biology , 382 :1184 , 2008 |
| Abstract : Papageorgiou_2008_J.Mol.Biol_382_1184 |
| ESTHER : Papageorgiou_2008_J.Mol.Biol_382_1184 |
| PubMedSearch : Papageorgiou_2008_J.Mol.Biol_382_1184 |
| PubMedID: 18706425 |
| Gene_locus related to this paper: psele-PHAZ7 |
| Title : Assay of poly(3-hydroxybutyrate) depolymerase activity and product determination - Gebauer_2006_Appl.Environ.Microbiol_72_6094 |
| Author(s) : Gebauer B , Jendrossek D |
| Ref : Applied Environmental Microbiology , 72 :6094 , 2006 |
| Abstract : Gebauer_2006_Appl.Environ.Microbiol_72_6094 |
| ESTHER : Gebauer_2006_Appl.Environ.Microbiol_72_6094 |
| PubMedSearch : Gebauer_2006_Appl.Environ.Microbiol_72_6094 |
| PubMedID: 16957234 |
| Title : Crystallization and preliminary X-ray analysis of a novel thermoalkalophilic poly(3-hydroxybutyrate) depolymerase (PhaZ7) from Paucimonas lemoignei - Kapetaniou_2005_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_61_479 |
| Author(s) : Kapetaniou EG , Braaz R , Jendrossek D , Papageorgiou AC |
| Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 61 :479 , 2005 |
| Abstract : Kapetaniou_2005_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_61_479 |
| ESTHER : Kapetaniou_2005_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_61_479 |
| PubMedSearch : Kapetaniou_2005_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_61_479 |
| PubMedID: 16511073 |
| Gene_locus related to this paper: psele-PHAZ7 |
| Title : The activator of the Rhodospirillum rubrum PHB depolymerase is a polypeptide that is extremely resistant to high temperature (121 degrees C) and other physical or chemical stresses - Handrick_2004_FEMS.Microbiol.Lett_230_265 |
| Author(s) : Handrick R , Technow U , Reichart T , Reinhardt S , Sander T , Jendrossek D |
| Ref : FEMS Microbiology Letters , 230 :265 , 2004 |
| Abstract : Handrick_2004_FEMS.Microbiol.Lett_230_265 |
| ESTHER : Handrick_2004_FEMS.Microbiol.Lett_230_265 |
| PubMedSearch : Handrick_2004_FEMS.Microbiol.Lett_230_265 |
| PubMedID: 14757249 |
| Title : Thermotolerant poly(3-hydroxybutyrate)-degrading bacteria from hot compost and characterization of the PHB depolymerase of Schlegelella sp. KB1a - Romen_2004_Arch.Microbiol_182_157 |
| Author(s) : Romen F , Reinhardt S , Jendrossek D |
| Ref : Arch Microbiol , 182 :157 , 2004 |
| Abstract : Romen_2004_Arch.Microbiol_182_157 |
| ESTHER : Romen_2004_Arch.Microbiol_182_157 |
| PubMedSearch : Romen_2004_Arch.Microbiol_182_157 |
| PubMedID: 15340791 |
| Gene_locus related to this paper: 9burk-Q5YEW3 |
| Title : The intracellular poly(3-hydroxybutyrate) (PHB) depolymerase of Rhodospirillum rubrum is a periplasm-located protein with specificity for native PHB and with structural similarity to extracellular PHB depolymerases - Handrick_2004_J.Bacteriol_186_7243 |
| Author(s) : Handrick R , Reinhardt S , Kimmig P , Jendrossek D |
| Ref : Journal of Bacteriology , 186 :7243 , 2004 |
| Abstract : Handrick_2004_J.Bacteriol_186_7243 |
| ESTHER : Handrick_2004_J.Bacteriol_186_7243 |
| PubMedSearch : Handrick_2004_J.Bacteriol_186_7243 |
| PubMedID: 15489436 |
| Gene_locus related to this paper: rhoru-q6ynp7 |
| Title : Identification and characterisation of the catalytic triad of the alkaliphilic thermotolerant PHA depolymerase PhaZ7 of Paucimonas lemoignei - Braaz_2003_FEMS.Microbiol.Lett_224_107 |
| Author(s) : Braaz R , Handrick R , Jendrossek D |
| Ref : FEMS Microbiology Letters , 224 :107 , 2003 |
| Abstract : Braaz_2003_FEMS.Microbiol.Lett_224_107 |
| ESTHER : Braaz_2003_FEMS.Microbiol.Lett_224_107 |
| PubMedSearch : Braaz_2003_FEMS.Microbiol.Lett_224_107 |
| PubMedID: 12855176 |
| Title : The PHB depolymerase inhibitor of Paucimonas lemoignei is a PHB depolymerase - Reinhardt_2002_Biomacromolecules_3_823 |
| Author(s) : Reinhardt S , Handrick R , Jendrossek D |
| Ref : Biomacromolecules , 3 :823 , 2002 |
| Abstract : Reinhardt_2002_Biomacromolecules_3_823 |
| ESTHER : Reinhardt_2002_Biomacromolecules_3_823 |
| PubMedSearch : Reinhardt_2002_Biomacromolecules_3_823 |
| PubMedID: 12099828 |
| Title : Microbial degradation of polyhydroxyalkanoates - Jendrossek_2002_Annu.Rev.Microbiol_56_403 |
| Author(s) : Jendrossek D , Handrick R |
| Ref : Annu Rev Microbiol , 56 :403 , 2002 |
| Abstract : Jendrossek_2002_Annu.Rev.Microbiol_56_403 |
| ESTHER : Jendrossek_2002_Annu.Rev.Microbiol_56_403 |
| PubMedSearch : Jendrossek_2002_Annu.Rev.Microbiol_56_403 |
| PubMedID: 12213937 |
| Title : A new type of thermoalkalophilic hydrolase of Paucimonas lemoignei with high specificity for amorphous polyesters of short chain-length hydroxyalkanoic acids - Handrick_2001_J.Biol.Chem_276_36215 |
| Author(s) : Handrick R , Reinhardt S , Focarete ML , Scandola M , Adamus G , Kowalczuk M , Jendrossek D |
| Ref : Journal of Biological Chemistry , 276 :36215 , 2001 |
| Abstract : Handrick_2001_J.Biol.Chem_276_36215 |
| ESTHER : Handrick_2001_J.Biol.Chem_276_36215 |
| PubMedSearch : Handrick_2001_J.Biol.Chem_276_36215 |
| PubMedID: 11457823 |
| Gene_locus related to this paper: psele-PHAZ7 |
| Title : Microbial degradation of polyesters - Jendrossek_2001_Adv.Biochem.Eng.Biotechnol_71_293 |
| Author(s) : Jendrossek D |
| Ref : Adv Biochem Eng Biotechnol , 71 :293 , 2001 |
| Abstract : Jendrossek_2001_Adv.Biochem.Eng.Biotechnol_71_293 |
| ESTHER : Jendrossek_2001_Adv.Biochem.Eng.Biotechnol_71_293 |
| PubMedSearch : Jendrossek_2001_Adv.Biochem.Eng.Biotechnol_71_293 |
| PubMedID: 11217416 |
| Title : Poly(3-hydroxyvalerate) depolymerase of Pseudomonas lemoignei - Schober_2000_Appl.Environ.Microbiol_66_1385 |
| Author(s) : Schober U , Thiel C , Jendrossek D |
| Ref : Applied Environmental Microbiology , 66 :1385 , 2000 |
| Abstract : Schober_2000_Appl.Environ.Microbiol_66_1385 |
| ESTHER : Schober_2000_Appl.Environ.Microbiol_66_1385 |
| PubMedSearch : Schober_2000_Appl.Environ.Microbiol_66_1385 |
| PubMedID: 10742216 |
| Gene_locus related to this paper: psele-Q9L7K1 |
| Title : Poly(3-hydroxybutyrate)-depolymerase from Pseudomonas lemoignei: catalysis of esterifications in organic media - Kumar_2000_J.Org.Chem_65_7800 |
| Author(s) : Kumar A , Gross RA , Jendrossek D |
| Ref : J Org Chem , 65 :7800 , 2000 |
| Abstract : Kumar_2000_J.Org.Chem_65_7800 |
| ESTHER : Kumar_2000_J.Org.Chem_65_7800 |
| PubMedSearch : Kumar_2000_J.Org.Chem_65_7800 |
| PubMedID: 11073584 |
| Title : Relationship between succinate transport and production of extracellular poly(3-hydroxybutyrate) depolymerase in Pseudomonas lemoignei - Terpe_1999_Appl.Environ.Microbiol_65_1703 |
| Author(s) : Terpe K , Kerkhoff K , Pluta E , Jendrossek D |
| Ref : Applied Environmental Microbiology , 65 :1703 , 1999 |
| Abstract : Terpe_1999_Appl.Environ.Microbiol_65_1703 |
| ESTHER : Terpe_1999_Appl.Environ.Microbiol_65_1703 |
| PubMedSearch : Terpe_1999_Appl.Environ.Microbiol_65_1703 |
| PubMedID: 10103271 |
| Title : A novel heat-stable lipolytic enzyme from Sulfolobus acidocaldarius DSM 639 displaying similarity to polyhydroxyalkanoate depolymerases - Arpigny_1998_FEMS.Microbiol.Lett_167_69 |
| Author(s) : Arpigny JL , Jendrossek D , Jaeger KE |
| Ref : FEMS Microbiology Letters , 167 :69 , 1998 |
| Abstract : Arpigny_1998_FEMS.Microbiol.Lett_167_69 |
| ESTHER : Arpigny_1998_FEMS.Microbiol.Lett_167_69 |
| PubMedSearch : Arpigny_1998_FEMS.Microbiol.Lett_167_69 |
| PubMedID: 9785454 |
| Gene_locus related to this paper: sulac-sal |
| Title : Isolation and identification of poly(3-hydroxyvalerate)-degrading strains of Pseudomonas lemoignei - Mergaert_1996_Int.J.Syst.Bacteriol_46_769 |
| Author(s) : Mergaert J , Schirmer A , Hauben L , Mau M , Hoste B , Kersters K , Jendrossek D , Swings J |
| Ref : Int J Syst Bacteriol , 46 :769 , 1996 |
| Abstract : Mergaert_1996_Int.J.Syst.Bacteriol_46_769 |
| ESTHER : Mergaert_1996_Int.J.Syst.Bacteriol_46_769 |
| PubMedSearch : Mergaert_1996_Int.J.Syst.Bacteriol_46_769 |
| PubMedID: 8782688 |
| Title : Taxonomic identification of Streptomyces exfoliatus K10 and characterization of its poly(3-hydroxybutyrate) depolymerase gene - Klingbeil_1996_FEMS.Microbiol.Lett_142_215 |
| Author(s) : Klingbeil B , Kroppenstedt RM , Jendrossek D |
| Ref : FEMS Microbiology Letters , 142 :215 , 1996 |
| Abstract : Klingbeil_1996_FEMS.Microbiol.Lett_142_215 |
| ESTHER : Klingbeil_1996_FEMS.Microbiol.Lett_142_215 |
| PubMedSearch : Klingbeil_1996_FEMS.Microbiol.Lett_142_215 |
| PubMedID: 8810505 |
| Title : Poly(3-hydroxybutyrate) depolymerases bind to their substrate by a C-terminal located substrate binding site - Behrends_1996_FEMS.Microbiol.Lett_143_191 |
| Author(s) : Behrends A , Klingbeil B , Jendrossek D |
| Ref : FEMS Microbiology Letters , 143 :191 , 1996 |
| Abstract : Behrends_1996_FEMS.Microbiol.Lett_143_191 |
| ESTHER : Behrends_1996_FEMS.Microbiol.Lett_143_191 |
| PubMedSearch : Behrends_1996_FEMS.Microbiol.Lett_143_191 |
| PubMedID: 8837471 |
| Title : Determination of the active sites serine of the poly (3-hydroxybutyrate) depolymerases of Pseudomonas lemoignei (PhaZ5) and of Alcaligenes faecalis - Shinohe_1996_FEMS.Microbiol.Lett_141_103 |
| Author(s) : Shinohe T , Nojiri M , Saito T , Stanislawski T , Jendrossek D |
| Ref : FEMS Microbiology Letters , 141 :103 , 1996 |
| Abstract : Shinohe_1996_FEMS.Microbiol.Lett_141_103 |
| ESTHER : Shinohe_1996_FEMS.Microbiol.Lett_141_103 |
| PubMedSearch : Shinohe_1996_FEMS.Microbiol.Lett_141_103 |
| PubMedID: 8764515 |
| Title : Biodegradation of polyhydroxyalkanoic acids - Jendrossek_1996_Appl.Microbiol.Biotechnol_46_451 |
| Author(s) : Jendrossek D , Schirmer A , Schlegel HG |
| Ref : Applied Microbiology & Biotechnology , 46 :451 , 1996 |
| Abstract : Jendrossek_1996_Appl.Microbiol.Biotechnol_46_451 |
| ESTHER : Jendrossek_1996_Appl.Microbiol.Biotechnol_46_451 |
| PubMedSearch : Jendrossek_1996_Appl.Microbiol.Biotechnol_46_451 |
| PubMedID: 9008883 |
| Title : Biochemical and molecular characterization of the Pseudomonas lemoignei polyhydroxyalkanoate depolymerase system - Jendrossek_1995_J.Bacteriol_177_596 |
| Author(s) : Jendrossek D , Frisse A , Behrends A , Andermann M , Kratzin HD , Stanislawski T , Schlegel HG |
| Ref : Journal of Bacteriology , 177 :596 , 1995 |
| Abstract : Jendrossek_1995_J.Bacteriol_177_596 |
| ESTHER : Jendrossek_1995_J.Bacteriol_177_596 |
| PubMedSearch : Jendrossek_1995_J.Bacteriol_177_596 |
| PubMedID: 7836292 |
| Gene_locus related to this paper: psele-PHAZ4 , psele-PHAZ5 |
| Title : Substrate specificities of poly(hydroxyalkanoate)-degrading bacteria and active site studies on the extracellular poly(3-hydroxyoctanoic acid) depolymerase of Pseudomonas fluorescens GK13 - Schirmer_1995_Can.J.Microbiol_41 Suppl 1_170 |
| Author(s) : Schirmer A , Matz C , Jendrossek D |
| Ref : Can J Microbiol , 41 Suppl 1 :170 , 1995 |
| Abstract : Schirmer_1995_Can.J.Microbiol_41 Suppl 1_170 |
| ESTHER : Schirmer_1995_Can.J.Microbiol_41 Suppl 1_170 |
| PubMedSearch : Schirmer_1995_Can.J.Microbiol_41 Suppl 1_170 |
| PubMedID: 7606661 |
| Gene_locus related to this paper: psefl-phaz |
| Title : Substrate specificities of bacterial polyhydroxyalkanoate depolymerases and lipases: bacterial lipases hydrolyze poly(omega-hydroxyalkanoates) - Jaeger_1995_Appl.Environ.Microbiol_61_3113 |
| Author(s) : Jaeger KE , Steinbuchel A , Jendrossek D |
| Ref : Applied Environmental Microbiology , 61 :3113 , 1995 |
| Abstract : Jaeger_1995_Appl.Environ.Microbiol_61_3113 |
| ESTHER : Jaeger_1995_Appl.Environ.Microbiol_61_3113 |
| PubMedSearch : Jaeger_1995_Appl.Environ.Microbiol_61_3113 |
| PubMedID: 7487042 |
| Title : Characterization of the extracellular poly(3-hydroxybutyrate) depolymerase of Comamonas sp. and of its structural gene - Jendrossek_1995_Can.J.Microbiol_41 Suppl 1_160 |
| Author(s) : Jendrossek D , Backhaus M , Andermann M |
| Ref : Can J Microbiol , 41 Suppl 1 :160 , 1995 |
| Abstract : Jendrossek_1995_Can.J.Microbiol_41 Suppl 1_160 |
| ESTHER : Jendrossek_1995_Can.J.Microbiol_41 Suppl 1_160 |
| PubMedSearch : Jendrossek_1995_Can.J.Microbiol_41 Suppl 1_160 |
| PubMedID: 7606660 |
| Gene_locus related to this paper: comte-PHAZ |
| Title : Pseudomonas lemoignei has five poly(hydroxyalkanoic acid) (PHA) depolymerase genes: a comparative study of bacterial and eucaryotic PHA depolymerases. - |
| Author(s) : Briese BH , Schmidt B , Jendrossek D |
| Ref : J Environ Polym Degrad , 2 :75 , 1994 |
| PubMedID: |
| Gene_locus related to this paper: psele-PHAZ2 , psele-PHAZ3 |
| Title : Molecular characterization of the extracellular poly(3-hydroxyoctanoic acid) [P(3HO)] depolymerase gene of Pseudomonas fluorescens GK13 and of its gene product - Schirmer_1994_J.Bacteriol_176_7065 |
| Author(s) : Schirmer A , Jendrossek D |
| Ref : Journal of Bacteriology , 176 :7065 , 1994 |
| Abstract : Schirmer_1994_J.Bacteriol_176_7065 |
| ESTHER : Schirmer_1994_J.Bacteriol_176_7065 |
| PubMedSearch : Schirmer_1994_J.Bacteriol_176_7065 |
| PubMedID: 7961472 |
| Gene_locus related to this paper: psefl-phaz |
| Title : Cloning and characterization of the poly(hydroxyalkanoic acid)-depolymerase gene locus, phaZ1, of Pseudomonas lemoignei and its gene product - Jendrossek_1993_Eur.J.Biochem_218_701 |
| Author(s) : Jendrossek D , Muller B , Schlegel HG |
| Ref : European Journal of Biochemistry , 218 :701 , 1993 |
| Abstract : Jendrossek_1993_Eur.J.Biochem_218_701 |
| ESTHER : Jendrossek_1993_Eur.J.Biochem_218_701 |
| PubMedSearch : Jendrossek_1993_Eur.J.Biochem_218_701 |
| PubMedID: 8269961 |
| Gene_locus related to this paper: psele-pha1 |
| Title : Degradation of poly(3-hydroxyoctanoic acid) [P(3HO)] by bacteria: purification and properties of a P(3HO) depolymerase from Pseudomonas fluorescens GK13 - Schirmer_1993_Appl.Environ.Microbiol_59_1220 |
| Author(s) : Schirmer A , Jendrossek D , Schlegel HG |
| Ref : Applied Environmental Microbiology , 59 :1220 , 1993 |
| Abstract : Schirmer_1993_Appl.Environ.Microbiol_59_1220 |
| ESTHER : Schirmer_1993_Appl.Environ.Microbiol_59_1220 |
| PubMedSearch : Schirmer_1993_Appl.Environ.Microbiol_59_1220 |
| PubMedID: 8476295 |
| Gene_locus related to this paper: psefl-phaz |