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References (42)

Title : Parallel evolution of non-homologous isofunctional enzymes in methionine biosynthesis - Bastard_2017_Nat.Chem.Biol_13_858
Author(s) : Bastard K , Perret A , Mariage A , Bessonnet T , Pinet-Turpault A , Petit JL , Darii E , Bazire P , Vergne-Vaxelaire C , Brewee C , Debard A , Pellouin V , Besnard-Gonnet M , Artiguenave F , Medigue C , Vallenet D , Danchin A , Zaparucha A , Weissenbach J , Salanoubat M , de Berardinis V
Ref : Nat Chemical Biology , 13 :858 , 2017
Abstract : Bastard_2017_Nat.Chem.Biol_13_858
ESTHER : Bastard_2017_Nat.Chem.Biol_13_858
PubMedSearch : Bastard_2017_Nat.Chem.Biol_13_858
PubMedID: 28581482
Gene_locus related to this paper: neima-metx , strmk-metx , defds-metxa , desmr-metxa , halvd-metxa , metfp-metxa , sulao-metxa , hallt-metxa , metez-metxa , halaf-metxs , metms-metxa , fraad-sst , halaf-sst , naupa-metxa , metzd-metxa , cycms-metxa , comtk-metxs , metpe-metxa , metrm-metxa , halnc-metxs , breda-metxs

Title : Comparative analysis of the complete genome of KPC-2-producing Klebsiella pneumoniae Kp13 reveals remarkable genome plasticity and a wide repertoire of virulence and resistance mechanisms - Ramos_2014_BMC.Genomics_15_54
Author(s) : Ramos PI , Picao RC , Almeida LG , Lima NC , Girardello R , Vivan AC , Xavier DE , Barcellos FG , Pelisson M , Vespero EC , Medigue C , Vasconcelos AT , Gales AC , Nicolas MF
Ref : BMC Genomics , 15 :54 , 2014
Abstract : Ramos_2014_BMC.Genomics_15_54
ESTHER : Ramos_2014_BMC.Genomics_15_54
PubMedSearch : Ramos_2014_BMC.Genomics_15_54
PubMedID: 24450656
Gene_locus related to this paper: klep7-y1077 , klepn-w8uta0

Title : Comparative genomic analysis provides insights into the evolution and niche adaptation of marine Magnetospira sp. QH-2 strain - Ji_2014_Environ.Microbiol_16_525
Author(s) : Ji B , Zhang SD , Arnoux P , Rouy Z , Alberto F , Philippe N , Murat D , Zhang WJ , Rioux JB , Ginet N , Sabaty M , Mangenot S , Pradel N , Tian J , Yang J , Zhang L , Zhang W , Pan H , Henrissat B , Coutinho PM , Li Y , Xiao T , Medigue C , Barbe V , Pignol D , Talla E , Wu LF
Ref : Environ Microbiol , 16 :525 , 2014
Abstract : Ji_2014_Environ.Microbiol_16_525
ESTHER : Ji_2014_Environ.Microbiol_16_525
PubMedSearch : Ji_2014_Environ.Microbiol_16_525
PubMedID: 23841906
Gene_locus related to this paper: 9prot-w6k5m7 , 9prot-w6khf2 , 9prot-w6kbu9

Title : Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo identifies virulence-associated traits - Goudenege_2013_ISME.J_7_1985
Author(s) : Goudenege D , Labreuche Y , Krin E , Ansquer D , Mangenot S , Calteau A , Medigue C , Mazel D , Polz MF , Le Roux F
Ref : Isme J , 7 :1985 , 2013
Abstract : Goudenege_2013_ISME.J_7_1985
ESTHER : Goudenege_2013_ISME.J_7_1985
PubMedSearch : Goudenege_2013_ISME.J_7_1985
PubMedID: 23739050
Gene_locus related to this paper: 9vibr-f9tu24 , 9vibr-u4ij97 , 9vibr-u4g9i9 , 9vibr-f9tk00

Title : Genome Sequence of the Obligate Gammaproteobacterial Methanotroph Methylomicrobium album Strain BG8 - Kits_2013_Genome.Announc_1_e0017013
Author(s) : Kits KD , Kalyuzhnaya MG , Klotz MG , Jetten MS , Op den Camp HJ , Vuilleumier S , Bringel F , DiSpirito AA , Murrell JC , Bruce D , Cheng JF , Copeland A , Goodwin L , Hauser L , Lajus A , Land ML , Lapidus A , Lucas S , Medigue C , Pitluck S , Woyke T , Zeytun A , Stein LY
Ref : Genome Announc , 1 :e0017013 , 2013
Abstract : Kits_2013_Genome.Announc_1_e0017013
ESTHER : Kits_2013_Genome.Announc_1_e0017013
PubMedSearch : Kits_2013_Genome.Announc_1_e0017013
PubMedID: 23580712

Title : Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis - Supply_2013_Nat.Genet_45_172
Author(s) : Supply P , Marceau M , Mangenot S , Roche D , Rouanet C , Khanna V , Majlessi L , Criscuolo A , Tap J , Pawlik A , Fiette L , Orgeur M , Fabre M , Parmentier C , Frigui W , Simeone R , Boritsch EC , Debrie AS , Willery E , Walker D , Quail MA , Ma L , Bouchier C , Salvignol G , Sayes F , Cascioferro A , Seemann T , Barbe V , Locht C , Gutierrez MC , Leclerc C , Bentley SD , Stinear TP , Brisse S , Medigue C , Parkhill J , Cruveiller S , Brosch R
Ref : Nat Genet , 45 :172 , 2013
Abstract : Supply_2013_Nat.Genet_45_172
ESTHER : Supply_2013_Nat.Genet_45_172
PubMedSearch : Supply_2013_Nat.Genet_45_172
PubMedID: 23291586
Gene_locus related to this paper: mycmm-b2ht49 , myctu-cut3 , myctu-cutas1 , myctu-cutas2 , myctu-Rv1069c , myctu-RV1215C , myctu-RV1758 , myctu-Rv2045c , myctu-RV3452 , myctu-RV3724 , myctu-Rv3802c

Title : Life in an arsenic-containing gold mine: genome and physiology of the autotrophic arsenite-oxidizing bacterium rhizobium sp. NT-26 - Andres_2013_Genome.Biol.Evol_5_934
Author(s) : Andres J , Arsene-Ploetze F , Barbe V , Brochier-Armanet C , Cleiss-Arnold J , Coppee JY , Dillies MA , Geist L , Joublin A , Koechler S , Lassalle F , Marchal M , Medigue C , Muller D , Nesme X , Plewniak F , Proux C , Ramirez-Bahena MH , Schenowitz C , Sismeiro O , Vallenet D , Santini JM , Bertin PN
Ref : Genome Biol Evol , 5 :934 , 2013
Abstract : Andres_2013_Genome.Biol.Evol_5_934
ESTHER : Andres_2013_Genome.Biol.Evol_5_934
PubMedSearch : Andres_2013_Genome.Biol.Evol_5_934
PubMedID: 23589360
Gene_locus related to this paper: rhisp-l0nkx2 , 9rhiz-l0net0

Title : Draft genome sequence of the purple photosynthetic bacterium Phaeospirillum molischianum DSM120, a particularly versatile bacterium - Duquesne_2012_J.Bacteriol_194_3559
Author(s) : Duquesne K , Prima V , Ji B , Rouy Z , Medigue C , Talla E , Sturgis JN
Ref : Journal of Bacteriology , 194 :3559 , 2012
Abstract : Duquesne_2012_J.Bacteriol_194_3559
ESTHER : Duquesne_2012_J.Bacteriol_194_3559
PubMedSearch : Duquesne_2012_J.Bacteriol_194_3559
PubMedID: 22689244
Gene_locus related to this paper: phamo-h8fpa5 , phamo-h8fpu9 , phamo-h8fqh7

Title : Genome sequence of the haloalkaliphilic methanotrophic bacterium Methylomicrobium alcaliphilum 20Z - Vuilleumier_2012_J.Bacteriol_194_551
Author(s) : Vuilleumier S , Khmelenina VN , Bringel F , Reshetnikov AS , Lajus A , Mangenot S , Rouy Z , Op den Camp HJ , Jetten MS , DiSpirito AA , Dunfield P , Klotz MG , Semrau JD , Stein LY , Barbe V , Medigue C , Trotsenko YA , Kalyuzhnaya MG
Ref : Journal of Bacteriology , 194 :551 , 2012
Abstract : Vuilleumier_2012_J.Bacteriol_194_551
ESTHER : Vuilleumier_2012_J.Bacteriol_194_551
PubMedSearch : Vuilleumier_2012_J.Bacteriol_194_551
PubMedID: 22207753

Title : Genome sequence of radiation-resistant Modestobacter marinus strain BC501, a representative actinobacterium that thrives on calcareous stone surfaces - Normand_2012_J.Bacteriol_194_4773
Author(s) : Normand P , Gury J , Pujic P , Chouaia B , Crotti E , Brusetti L , Daffonchio D , Vacherie B , Barbe V , Medigue C , Calteau A , Ghodhbane-Gtari F , Essoussi I , Nouioui I , Abbassi-Ghozzi I , Gtari M
Ref : Journal of Bacteriology , 194 :4773 , 2012
Abstract : Normand_2012_J.Bacteriol_194_4773
ESTHER : Normand_2012_J.Bacteriol_194_4773
PubMedSearch : Normand_2012_J.Bacteriol_194_4773
PubMedID: 22887672
Gene_locus related to this paper: modmb-i4eyb4 , modmb-i4f114 , modmb-i4f525 , modmb-i4f4c1

Title : Comparative genomics of aeschynomene symbionts: insights into the ecological lifestyle of nod-independent photosynthetic bradyrhizobia - Mornico_2011_Genes.(Basel)_3_35
Author(s) : Mornico D , Miche L , Bena G , Nouwen N , Vermeglio A , Vallenet D , Smith AA , Giraud E , Medigue C , Moulin L
Ref : Genes (Basel) , 3 :35 , 2011
Abstract : Mornico_2011_Genes.(Basel)_3_35
ESTHER : Mornico_2011_Genes.(Basel)_3_35
PubMedSearch : Mornico_2011_Genes.(Basel)_3_35
PubMedID: 24704842
Gene_locus related to this paper: 9brad-h0sq52 , 9brad-h0rwm8 , 9brad-h0sa48 , 9brad-h0t9f2 , 9brad-h0tzi3 , 9brad-h0t2z1 , 9brad-h0trw8 , 9brad-h0tue9 , 9brad-h0t676 , 9brad-h0sxc0 , 9brad-h0tmw5 , 9brad-h0s7i3 , 9brad-h0sie9 , 9brad-h0swe3 , 9brad-h0stz0

Title : Ralstonia syzygii, the Blood Disease Bacterium and some Asian R. solanacearum strains form a single genomic species despite divergent lifestyles - Remenant_2011_PLoS.One_6_e24356
Author(s) : Remenant B , de Cambiaire JC , Cellier G , Jacobs JM , Mangenot S , Barbe V , Lajus A , Vallenet D , Medigue C , Fegan M , Allen C , Prior P
Ref : PLoS ONE , 6 :e24356 , 2011
Abstract : Remenant_2011_PLoS.One_6_e24356
ESTHER : Remenant_2011_PLoS.One_6_e24356
PubMedSearch : Remenant_2011_PLoS.One_6_e24356
PubMedID: 21931687
Gene_locus related to this paper: 9rals-g2zrs4 , 9rals-g3a1g4 , ralsl-a0a072zy50 , 9rals-g3a7g7

Title : Parallel evolution of a type IV secretion system in radiating lineages of the host-restricted bacterial pathogen Bartonella - Engel_2011_PLoS.Genet_7_e1001296
Author(s) : Engel P , Salzburger W , Liesch M , Chang CC , Maruyama S , Lanz C , Calteau A , Lajus A , Medigue C , Schuster SC , Dehio C
Ref : PLoS Genet , 7 :e1001296 , 2011
Abstract : Engel_2011_PLoS.Genet_7_e1001296
ESTHER : Engel_2011_PLoS.Genet_7_e1001296
PubMedSearch : Engel_2011_PLoS.Genet_7_e1001296
PubMedID: 21347280
Gene_locus related to this paper: 9rhiz-e6ylz4 , 9rhiz-e6yvr1 , barsr-e6yyv8 , brume-BMEI1594 , 9rhiz-e6ylv9 , 9rhiz-e6yr44

Title : Genome sequence of the methanotrophic alphaproteobacterium Methylocystis sp. strain Rockwell (ATCC 49242) - Stein_2011_J.Bacteriol_193_2668
Author(s) : Stein LY , Bringel F , DiSpirito AA , Han S , Jetten MS , Kalyuzhnaya MG , Kits KD , Klotz MG , Op den Camp HJ , Semrau JD , Vuilleumier S , Bruce DC , Cheng JF , Davenport KW , Goodwin L , Hauser L , Lajus A , Land ML , Lapidus A , Lucas S , Medigue C , Pitluck S , Woyke T
Ref : Journal of Bacteriology , 193 :2668 , 2011
Abstract : Stein_2011_J.Bacteriol_193_2668
ESTHER : Stein_2011_J.Bacteriol_193_2668
PubMedSearch : Stein_2011_J.Bacteriol_193_2668
PubMedID: 21441518
Gene_locus related to this paper: 9rhiz-e8ky64 , 9rhiz-e8l0f5 , 9rhiz-e8l1r9 , 9rhiz-e8l2p9 , 9rhiz-e8l5j3 , 9rhiz-e8l733

Title : Genome sequence of Methyloversatilis universalis FAM5T, a methylotrophic representative of the order Rhodocyclales - Kittichotirat_2011_J.Bacteriol_193_4541
Author(s) : Kittichotirat W , Good NM , Hall R , Bringel F , Lajus A , Medigue C , Smalley NE , Beck D , Bumgarner R , Vuilleumier S , Kalyuzhnaya MG
Ref : Journal of Bacteriology , 193 :4541 , 2011
Abstract : Kittichotirat_2011_J.Bacteriol_193_4541
ESTHER : Kittichotirat_2011_J.Bacteriol_193_4541
PubMedSearch : Kittichotirat_2011_J.Bacteriol_193_4541
PubMedID: 21725020
Gene_locus related to this paper: 9rhoo-f5rf80 , metuf-f5rhz8

Title : The entomopathogenic bacterial endosymbionts Xenorhabdus and Photorhabdus: convergent lifestyles from divergent genomes - Chaston_2011_PLoS.One_6_e27909
Author(s) : Chaston JM , Suen G , Tucker SL , Andersen AW , Bhasin A , Bode E , Bode HB , Brachmann AO , Cowles CE , Cowles KN , Darby C , de Leon L , Drace K , Du Z , Givaudan A , Herbert Tran EE , Jewell KA , Knack JJ , Krasomil-Osterfeld KC , Kukor R , Lanois A , Latreille P , Leimgruber NK , Lipke CM , Liu R , Lu X , Martens EC , Marri PR , Medigue C , Menard ML , Miller NM , Morales-Soto N , Norton S , Ogier JC , Orchard SS , Park D , Park Y , Qurollo BA , Sugar DR , Richards GR , Rouy Z , Slominski B , Slominski K , Snyder H , Tjaden BC , van der Hoeven R , Welch RD , Wheeler C , Xiang B , Barbazuk B , Gaudriault S , Goodner B , Slater SC , Forst S , Goldman BS , Goodrich-Blair H
Ref : PLoS ONE , 6 :e27909 , 2011
Abstract : Chaston_2011_PLoS.One_6_e27909
ESTHER : Chaston_2011_PLoS.One_6_e27909
PubMedSearch : Chaston_2011_PLoS.One_6_e27909
PubMedID: 22125637
Gene_locus related to this paper: xenna-d3vdr8 , xenne-n1nl20 , xenbs-d3v2h2

Title : From array-based hybridization of Helicobacter pylori isolates to the complete genome sequence of an isolate associated with MALT lymphoma - Thiberge_2010_BMC.Genomics_11_368
Author(s) : Thiberge JM , Boursaux-Eude C , Lehours P , Dillies MA , Creno S , Coppee JY , Rouy Z , Lajus A , Ma L , Burucoa C , Ruskone-Foumestraux A , Courillon-Mallet A , De Reuse H , Boneca IG , Lamarque D , Megraud F , Delchier JC , Medigue C , Bouchier C , Labigne A , Raymond J
Ref : BMC Genomics , 11 :368 , 2010
Abstract : Thiberge_2010_BMC.Genomics_11_368
ESTHER : Thiberge_2010_BMC.Genomics_11_368
PubMedSearch : Thiberge_2010_BMC.Genomics_11_368
PubMedID: 20537153

Title : Structure, function, and evolution of the Thiomonas spp. genome - Arsene-Ploetze_2010_PLoS.Genet_6_e1000859
Author(s) : Arsene-Ploetze F , Koechler S , Marchal M , Coppee JY , Chandler M , Bonnefoy V , Brochier-Armanet C , Barakat M , Barbe V , Battaglia-Brunet F , Bruneel O , Bryan CG , Cleiss-Arnold J , Cruveiller S , Erhardt M , Heinrich-Salmeron A , Hommais F , Joulian C , Krin E , Lieutaud A , Lievremont D , Michel C , Muller D , Ortet P , Proux C , Siguier P , Roche D , Rouy Z , Salvignol G , Slyemi D , Talla E , Weiss S , Weissenbach J , Medigue C , Bertin PN
Ref : PLoS Genet , 6 :e1000859 , 2010
Abstract : Arsene-Ploetze_2010_PLoS.Genet_6_e1000859
ESTHER : Arsene-Ploetze_2010_PLoS.Genet_6_e1000859
PubMedSearch : Arsene-Ploetze_2010_PLoS.Genet_6_e1000859
PubMedID: 20195515
Gene_locus related to this paper: thik1-d5x539 , thia3-d6cv72 , thia3-d6clv8

Title : Genome sequence of the obligate methanotroph Methylosinus trichosporium strain OB3b - Stein_2010_J.Bacteriol_192_6497
Author(s) : Stein LY , Yoon S , Semrau JD , DiSpirito AA , Crombie A , Murrell JC , Vuilleumier S , Kalyuzhnaya MG , Op den Camp HJ , Bringel F , Bruce D , Cheng JF , Copeland A , Goodwin L , Han S , Hauser L , Jetten MS , Lajus A , Land ML , Lapidus A , Lucas S , Medigue C , Pitluck S , Woyke T , Zeytun A , Klotz MG
Ref : Journal of Bacteriology , 192 :6497 , 2010
Abstract : Stein_2010_J.Bacteriol_192_6497
ESTHER : Stein_2010_J.Bacteriol_192_6497
PubMedSearch : Stein_2010_J.Bacteriol_192_6497
PubMedID: 20952571
Gene_locus related to this paper: mettr-d5qk82 , mettr-d5qqb3 , mettr-d5qrl9

Title : The genome sequence of the cyanobacterium Oscillatoria sp. PCC 6506 reveals several gene clusters responsible for the biosynthesis of toxins and secondary metabolites - Mejean_2010_J.Bacteriol_192_5264
Author(s) : Mejean A , Mazmouz R , Mann S , Calteau A , Medigue C , Ploux O
Ref : Journal of Bacteriology , 192 :5264 , 2010
Abstract : Mejean_2010_J.Bacteriol_192_5264
ESTHER : Mejean_2010_J.Bacteriol_192_5264
PubMedSearch : Mejean_2010_J.Bacteriol_192_5264
PubMedID: 20675499
Gene_locus related to this paper: 9cyan-d8fuq7 , 9cyan-d8g8x6 , 9cyan-d8g419 , 9cyan-d8g600 , 9cyan-d8fxr9

Title : Complete genome sequence of Crohn's disease-associated adherent-invasive E. coli strain LF82 - Miquel_2010_PLoS.One_5_e12714
Author(s) : Miquel S , Peyretaillade E , Claret L , de Vallee A , Dossat C , Vacherie B , Zineb el H , Segurens B , Barbe V , Sauvanet P , Neut C , Colombel JF , Medigue C , Mojica FJ , Peyret P , Bonnet R , Darfeuille-Michaud A
Ref : PLoS ONE , 5 : , 2010
Abstract : Miquel_2010_PLoS.One_5_e12714
ESTHER : Miquel_2010_PLoS.One_5_e12714
PubMedSearch : Miquel_2010_PLoS.One_5_e12714
PubMedID: 20862302
Gene_locus related to this paper: ecoli-yeiG , ecoli-yqia

Title : Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence - Remenant_2010_BMC.Genomics_11_379
Author(s) : Remenant B , Coupat-Goutaland B , Guidot A , Cellier G , Wicker E , Allen C , Fegan M , Pruvost O , Elbaz M , Calteau A , Salvignol G , Mornico D , Mangenot S , Barbe V , Medigue C , Prior P
Ref : BMC Genomics , 11 :379 , 2010
Abstract : Remenant_2010_BMC.Genomics_11_379
ESTHER : Remenant_2010_BMC.Genomics_11_379
PubMedSearch : Remenant_2010_BMC.Genomics_11_379
PubMedID: 20550686
Gene_locus related to this paper: ralsl-d8p4i2 , ralso-d8njk6 , ralso-PCAD , ralso-PCAD2 , ralso-PHAZ , ralso-PHBC , ralso-RSC0439 , ralso-RSC0563 , ralso-RSC0604 , ralso-RSC1003 , ralso-RSC1344 , ralso-RSC1772 , ralso-RSC1804 , ralso-RSC1811 , ralso-RSC1887 , ralso-RSC2149 , ralso-RSC2228 , ralso-RSC2781 , ralso-RSC3346 , ralso-RSP0196 , ralso-RSP0795 , ralso-RSP1108 , ralso-RSP1248 , ralso-RSP1521 , ralsl-d8ny30 , ralsl-y0kx85 , ralsl-a0a072zy50

Title : Genomic, proteomic, and transcriptomic analysis of virulent and avirulent Rickettsia prowazekii reveals its adaptive mutation capabilities - Bechah_2010_Genome.Res_20_655
Author(s) : Bechah Y , El Karkouri K , Mediannikov O , Leroy Q , Pelletier N , Robert C , Medigue C , Mege JL , Raoult D
Ref : Genome Res , 20 :655 , 2010
Abstract : Bechah_2010_Genome.Res_20_655
ESTHER : Bechah_2010_Genome.Res_20_655
PubMedSearch : Bechah_2010_Genome.Res_20_655
PubMedID: 20368341
Gene_locus related to this paper: ricpr-RP738

Title : From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later - Barbe_2009_Microbiology_155_1758
Author(s) : Barbe V , Cruveiller S , Kunst F , Lenoble P , Meurice G , Sekowska A , Vallenet D , Wang T , Moszer I , Medigue C , Danchin A
Ref : Microbiology , 155 :1758 , 2009
Abstract : Barbe_2009_Microbiology_155_1758
ESTHER : Barbe_2009_Microbiology_155_1758
PubMedSearch : Barbe_2009_Microbiology_155_1758
PubMedID: 19383706

Title : NeMeSys: a biological resource for narrowing the gap between sequence and function in the human pathogen Neisseria meningitidis - Rusniok_2009_Genome.Biol_10_R110
Author(s) : Rusniok C , Vallenet D , Floquet S , Ewles H , Mouze-Soulama C , Brown D , Lajus A , Buchrieser C , Medigue C , Glaser P , Pelicic V
Ref : Genome Biol , 10 :R110 , 2009
Abstract : Rusniok_2009_Genome.Biol_10_R110
ESTHER : Rusniok_2009_Genome.Biol_10_R110
PubMedSearch : Rusniok_2009_Genome.Biol_10_R110
PubMedID: 19818133
Gene_locus related to this paper: neimb-q9k0t9 , neime-ESD , neime-NMA2216 , neime-NMB0276 , neime-NMB1828

Title : Genome sequence of the saprophyte Leptospira biflexa provides insights into the evolution of Leptospira and the pathogenesis of leptospirosis - Picardeau_2008_PLoS.One_3_e1607
Author(s) : Picardeau M , Bulach DM , Bouchier C , Zuerner RL , Zidane N , Wilson PJ , Creno S , Kuczek ES , Bommezzadri S , Davis JC , McGrath A , Johnson MJ , Boursaux-Eude C , Seemann T , Rouy Z , Coppel RL , Rood JI , Lajus A , Davies JK , Medigue C , Adler B
Ref : PLoS ONE , 3 :e1607 , 2008
Abstract : Picardeau_2008_PLoS.One_3_e1607
ESTHER : Picardeau_2008_PLoS.One_3_e1607
PubMedSearch : Picardeau_2008_PLoS.One_3_e1607
PubMedID: 18270594
Gene_locus related to this paper: lepba-b0s8t1 , lepba-b0s8u7 , lepba-b0s8y3 , lepba-b0s9i9 , lepba-b0sav1 , lepba-b0sbc1 , lepba-b0sc63 , lepba-b0scl1 , lepba-b0sct4 , lepba-b0sgs6 , lepba-b0sif1 , lepba-metx , lepbp-b0sju7 , lepbp-b0slj1 , lepbp-b0smw1 , lepbp-b0spz3 , lepbp-b0sqw9 , lepbp-b0ssy9 , lepbp-b0sui7

Title : Genome sequence of the beta-rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia - Amadou_2008_Genome.Res_18_1472
Author(s) : Amadou C , Pascal G , Mangenot S , Glew M , Bontemps C , Capela D , Carrere S , Cruveiller S , Dossat C , Lajus A , Marchetti M , Poinsot V , Rouy Z , Servin B , Saad M , Schenowitz C , Barbe V , Batut J , Medigue C , Masson-Boivin C
Ref : Genome Res , 18 :1472 , 2008
Abstract : Amadou_2008_Genome.Res_18_1472
ESTHER : Amadou_2008_Genome.Res_18_1472
PubMedSearch : Amadou_2008_Genome.Res_18_1472
PubMedID: 18490699
Gene_locus related to this paper: cuppj-metx , cuppj-q46nh7 , cuptr-b2agb4 , cuptr-b2ahd0 , cuptr-b2ahw1 , cuptr-b2ai18 , cuptr-b2ai31 , cuptr-b2aii9 , cuptr-b2aik0 , cuptr-b2aiq3 , cuptr-b3r2j1 , cuptr-b3r3y6 , cuptr-b3r4w6 , cuptr-b3r7p4 , cuptr-b3r8d6 , cuptr-b3r8f5 , cuptr-b3r9z0 , cuptr-b3r255 , cuptr-b3r457 , cuptr-b3r543 , cuptr-b3ras4 , cuptr-b3rau3 , cuptr-b3rb04 , cuptr-b3rbm8 , cuptr-b3rd43 , cuptr-b3r6t6 , cuptr-b3r3f3 , cuptr-b3r2m0

Title : A tale of two oxidation states: bacterial colonization of arsenic-rich environments - Muller_2007_PLoS.Genet_3_e53
Author(s) : Muller D , Medigue C , Koechler S , Barbe V , Barakat M , Talla E , Bonnefoy V , Krin E , Arsene-Ploetze F , Carapito C , Chandler M , Cournoyer B , Cruveiller S , Dossat C , Duval S , Heymann M , Leize E , Lieutaud A , Lievremont D , Makita Y , Mangenot S , Nitschke W , Ortet P , Perdrial N , Schoepp B , Siguier P , Simeonova DD , Rouy Z , Segurens B , Turlin E , Vallenet D , Van Dorsselaer A , Weiss S , Weissenbach J , Lett MC , Danchin A , Bertin PN
Ref : PLoS Genet , 3 :e53 , 2007
Abstract : Muller_2007_PLoS.Genet_3_e53
ESTHER : Muller_2007_PLoS.Genet_3_e53
PubMedSearch : Muller_2007_PLoS.Genet_3_e53
PubMedID: 17432936
Gene_locus related to this paper: herar-a4g4w8 , herar-a4g5p0 , herar-a4g6p3 , herar-a4g378 , herar-a4g411 , herar-a4g622 , herar-a4g818 , herar-a4g899 , herar-a4gac3 , herar-metx , herar-a4g8n7

Title : Genome characteristics of facultatively symbiotic Frankia sp. strains reflect host range and host plant biogeography - Normand_2007_Genome.Res_17_7
Author(s) : Normand P , Lapierre P , Tisa LS , Gogarten JP , Alloisio N , Bagnarol E , Bassi CA , Berry AM , Bickhart DM , Choisne N , Couloux A , Cournoyer B , Cruveiller S , Daubin V , Demange N , Francino MP , Goltsman E , Huang Y , Kopp OR , Labarre L , Lapidus A , Lavire C , Marechal J , Martinez M , Mastronunzio JE , Mullin BC , Niemann J , Pujic P , Rawnsley T , Rouy Z , Schenowitz C , Sellstedt A , Tavares F , Tomkins JP , Vallenet D , Valverde C , Wall LG , Wang Y , Medigue C , Benson DR
Ref : Genome Res , 17 :7 , 2007
Abstract : Normand_2007_Genome.Res_17_7
ESTHER : Normand_2007_Genome.Res_17_7
PubMedSearch : Normand_2007_Genome.Res_17_7
PubMedID: 17151343
Gene_locus related to this paper: frasn-a8leg3 , fraaa-q0rau9 , fraaa-q0rbj9 , fraaa-q0rc03 , fraaa-q0rc89 , fraaa-q0rci1 , fraaa-q0rdx4 , fraaa-q0ref4 , fraaa-q0rel4 , fraaa-q0req5 , fraaa-q0rev2 , fraaa-q0rfl4 , fraaa-q0rfz5 , fraaa-q0rhz6 , fraaa-q0rjm3 , fraaa-q0rjt2 , fraaa-q0rkm8 , fraaa-q0rkv5 , fraaa-q0rl43 , fraaa-q0rlp9 , fraaa-q0rm04 , fraaa-q0rmn2 , fraaa-q0rmz5 , fraaa-q0rqg7 , fraaa-q0rr69 , fraaa-q0rrm7 , fraaa-q0rs07 , fraaa-q0rt07 , fraaa-q0rt55 , fraaa-q0rt70 , fraaa-q0rt91 , fraaa-q0rtc4 , fraaa-q0rte4 , fraaa-q0rtv2 , fraaa-q0rum6 , frasc-q2j5v5 , frasc-q2j8e6 , frasc-q2jct6 , frasn-a8kx42 , frasn-a8kyp2 , frasn-A8L0F8 , frasn-a8l0g7 , frasn-a8l1j7 , frasn-a8l1t9 , frasn-a8l4h8 , frasn-a8l7f8 , frasn-a8l8i4 , frasn-a8l8k8 , frasn-a8l9e9 , frasn-a8l051 , frasn-a8l115 , frasn-a8l161 , frasn-a8l265 , frasn-a8l268 , frasn-a8l720 , frasn-a8l745 , frasn-a8l755 , frasn-a8l875 , frasn-a8lab3 , frasn-a8lag3 , frasn-a8lb99 , frasn-a8lbd8 , frasn-a8lbj7 , frasn-a8lbj8 , frasn-a8lby7 , frasn-a8ldb7 , frasn-a8ldd0 , frasn-a8le91 , frasn-a8leg6 , frasn-a8leq6 , frasn-a8let0 , frasn-a8lf43 , frasn-a8lfg3 , frasn-a8lfl1 , frasn-a8lgw1 , frasn-a8lgy1 , frasc-q2j553 , frasn-a8l2m3 , fraaa-q0rd38 , frasc-q2j6h2 , frasn-a8lfl3 , frasn-a8leg7 , frasn-a8l5b8 , fraaa-q0rgz4 , fraaa-q0rtv3 , frasn-a8le98 , frasn-a8leb4

Title : Legumes symbioses: absence of Nod genes in photosynthetic bradyrhizobia - Giraud_2007_Science_316_1307
Author(s) : Giraud E , Moulin L , Vallenet D , Barbe V , Cytryn E , Avarre JC , Jaubert M , Simon D , Cartieaux F , Prin Y , Bena G , Hannibal L , Fardoux J , Kojadinovic M , Vuillet L , Lajus A , Cruveiller S , Rouy Z , Mangenot S , Segurens B , Dossat C , Franck WL , Chang WS , Saunders E , Bruce D , Richardson P , Normand P , Dreyfus B , Pignol D , Stacey G , Emerich D , Vermeglio A , Medigue C , Sadowsky M
Ref : Science , 316 :1307 , 2007
Abstract : Giraud_2007_Science_316_1307
ESTHER : Giraud_2007_Science_316_1307
PubMedSearch : Giraud_2007_Science_316_1307
PubMedID: 17540897
Gene_locus related to this paper: brasb-a5e8s7 , brasb-a5e9h9 , brasb-a5e9x2 , brasb-a5eac3 , brasb-a5eb24 , brasb-a5ech6 , brasb-a5eck9 , brasb-a5ed44 , brasb-a5edz7 , brasb-a5ee62 , brasb-a5ees1 , brasb-a5ef53 , brasb-a5efp3 , brasb-a5efp4 , brasb-a5eg29 , brasb-a5eh09 , brasb-a5ei81 , brasb-a5eiy7 , brasb-a5ej26 , brasb-a5ek41 , brasb-a5elh0 , brasb-a5ema7 , brasb-a5emc8 , brasb-a5eml7 , brasb-a5ene5 , brasb-a5ent6 , brasb-a5eny8 , brasb-a5ep81 , brasb-a5eph8 , brasb-a5epv4 , brasb-a5epx9 , brasb-a5eqb3 , brasb-a5erc8 , brasb-a5esb1 , brasb-a5ese9 , brasb-a5esl7 , brasb-a5esv5 , brasb-a5esw6 , brasb-a5etk7 , brasb-a5eul1 , braso-a4yk16 , braso-a4yl66 , braso-a4ylm4 , braso-a4ylr9 , braso-a4ylx7 , braso-a4ymj8 , braso-a4ynl1 , braso-a4ypd9 , braso-a4yqh3 , braso-a4yr10 , braso-a4yri0 , braso-a4yt56 , braso-a4yul4 , braso-a4yw76 , braso-a4ywb6 , braso-a4yxg2 , braso-a4yy49 , braso-a4yyj6 , braso-a4yzd7 , braso-a4yzh0 , braso-a4z0q9 , braso-a4z0v7 , braso-a4z1h1 , braso-a4z1p1 , braso-a4z1p8 , braso-a4z1v6 , braso-a4z2a5 , braso-a4z152 , braso-a4yl32 , brasb-a5et63 , brasb-a5emr8 , braso-a4ynl2 , brasb-a5eqb2 , braso-a4yr63

Title : Complete genome sequence of the entomopathogenic and metabolically versatile soil bacterium Pseudomonas entomophila - Vodovar_2006_Nat.Biotechnol_24_673
Author(s) : Vodovar N , Vallenet D , Cruveiller S , Rouy Z , Barbe V , Acosta C , Cattolico L , Jubin C , Lajus A , Segurens B , Vacherie B , Wincker P , Weissenbach J , Lemaitre B , Medigue C , Boccard F
Ref : Nat Biotechnol , 24 :673 , 2006
Abstract : Vodovar_2006_Nat.Biotechnol_24_673
ESTHER : Vodovar_2006_Nat.Biotechnol_24_673
PubMedSearch : Vodovar_2006_Nat.Biotechnol_24_673
PubMedID: 16699499
Gene_locus related to this paper: pseae-PA1622 , psee4-q1i2k0 , psee4-q1i3a7 , psee4-q1i3n8 , psee4-q1i4y6 , psee4-q1i4z6 , psee4-q1i5s3 , psee4-q1i5s9 , psee4-q1i6r6 , psee4-q1i9a0 , psee4-q1i9c3 , psee4-q1i9h5 , psee4-q1i9t2 , psee4-q1iaa7 , psee4-q1ibu9 , psee4-q1icm5 , psee4-q1idp8 , psee4-q1idv7 , psee4-q1ie27 , psee4-q1ie44 , psee4-q1ifj6 , psee4-q1ifn8 , psee4-q1ig13 , psee4-q1ige4 , psep1-a5wax1 , psepg-b0kir7 , psepk-q88nk6 , psepu-METX , psepu-PHAZ , psepu-PIP , psepu-PP1617 , psepu-PP4178 , psepu-PP4551 , psee4-q1icg3

Title : Deciphering the evolution and metabolism of an anammox bacterium from a community genome - Strous_2006_Nature_440_790
Author(s) : Strous M , Pelletier E , Mangenot S , Rattei T , Lehner A , Taylor MW , Horn M , Daims H , Bartol-Mavel D , Wincker P , Barbe V , Fonknechten N , Vallenet D , Segurens B , Schenowitz-Truong C , Medigue C , Collingro A , Snel B , Dutilh BE , Op den Camp HJ , van der Drift C , Cirpus I , van de Pas-Schoonen KT , Harhangi HR , van Niftrik L , Schmid M , Keltjens J , van de Vossenberg J , Kartal B , Meier H , Frishman D , Huynen MA , Mewes HW , Weissenbach J , Jetten MS , Wagner M , Le Paslier D
Ref : Nature , 440 :790 , 2006
Abstract : Strous_2006_Nature_440_790
ESTHER : Strous_2006_Nature_440_790
PubMedSearch : Strous_2006_Nature_440_790
PubMedID: 16598256
Gene_locus related to this paper: 9bact-q1py93 , 9bact-q1q3k9 , 9bact-q1q414

Title : Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125 - Medigue_2005_Genome.Res_15_1325
Author(s) : Medigue C , Krin E , Pascal G , Barbe V , Bernsel A , Bertin PN , Cheung F , Cruveiller S , D'Amico S , Duilio A , Fang G , Feller G , Ho C , Mangenot S , Marino G , Nilsson J , Parrilli E , Rocha EP , Rouy Z , Sekowska A , Tutino ML , Vallenet D , von Heijne G , Danchin A
Ref : Genome Res , 15 :1325 , 2005
Abstract : Medigue_2005_Genome.Res_15_1325
ESTHER : Medigue_2005_Genome.Res_15_1325
PubMedSearch : Medigue_2005_Genome.Res_15_1325
PubMedID: 16169927
Gene_locus related to this paper: pseht-q3icg6 , pseht-q3icm3 , pseht-q3icu1 , pseht-q3id97 , pseht-q3ida0 , pseht-q3idf4 , pseht-q3ie89 , pseht-q3ieu0 , pseht-q3iev9 , pseht-q3if93 , pseht-q3ifd8 , pseht-q3ife2 , pseht-q3ig70 , pseht-q3igp2 , pseht-q3igv0 , pseht-q3ihr6 , pseht-q3ii38 , pseht-q3iid7 , pseht-q3iip2 , pseht-q3iir1 , pseht-q3iis4 , pseht-q3ijn3 , pseht-q3ijt3 , pseht-q3ijy1 , pseht-q3ijy8 , pseht-q3ik03 , pseht-q3ikv5 , pseht-q3il66 , pseht-q3ik88

Title : Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis - Chain_2004_Proc.Natl.Acad.Sci.U.S.A_101_13826
Author(s) : Chain PS , Carniel E , Larimer FW , Lamerdin J , Stoutland PO , Regala WM , Georgescu AM , Vergez LM , Land ML , Motin VL , Brubaker RR , Fowler J , Hinnebusch J , Marceau M , Medigue C , Simonet M , Chenal-Francisque V , Souza B , Dacheux D , Elliott JM , Derbise A , Hauser LJ , Garcia E
Ref : Proc Natl Acad Sci U S A , 101 :13826 , 2004
Abstract : Chain_2004_Proc.Natl.Acad.Sci.U.S.A_101_13826
ESTHER : Chain_2004_Proc.Natl.Acad.Sci.U.S.A_101_13826
PubMedSearch : Chain_2004_Proc.Natl.Acad.Sci.U.S.A_101_13826
PubMedID: 15358858
Gene_locus related to this paper: yerpe-BIOH , yerpe-dlhh , yerpe-IRP1 , yerpe-PIP , yerpe-PLDB , yerpe-PTRB , yerpe-Y0507 , yerpe-Y0644 , yerpe-y1616 , yerpe-y3224 , yerpe-YBTT , yerpe-YPLA , yerpe-YPO0180 , yerpe-YPO0667 , yerpe-YPO0773 , yerpe-YPO0776 , yerpe-YPO0986 , yerpe-YPO1501 , yerpe-YPO1997 , yerpe-YPO2002 , yerpe-YPO2336 , yerpe-YPO2526 , yerpe-YPO2638 , yerpe-YPO2814

Title : Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv - Camus_2002_Microbiology_148_2967
Author(s) : Camus JC , Pryor MJ , Medigue C , Cole ST
Ref : Microbiology , 148 :2967 , 2002
Abstract : Camus_2002_Microbiology_148_2967
ESTHER : Camus_2002_Microbiology_148_2967
PubMedSearch : Camus_2002_Microbiology_148_2967
PubMedID: 12368430
Gene_locus related to this paper: myctu-d5yk66 , myctu-ephA , myctu-ephB , myctu-LPQP , myctu-p71654 , myctu-Rv0160c , myctu-RV0774C , myctu-Rv2485c , myctu-RV2672 , myctu-RV2695 , myctu-RV2765 , myctu-RV2800 , myctu-Rv2970c , myctu-Rv3084 , myctu-Rv3097c , myctu-RV3452

Title : Detecting and analyzing DNA sequencing errors: toward a higher quality of the Bacillus subtilis genome sequence - Medigue_1999_Genome.Res_9_1116
Author(s) : Medigue C , Rose M , Viari A , Danchin A
Ref : Genome Res , 9 :1116 , 1999
Abstract : Medigue_1999_Genome.Res_9_1116
ESTHER : Medigue_1999_Genome.Res_9_1116
PubMedSearch : Medigue_1999_Genome.Res_9_1116
PubMedID: 10568751
Gene_locus related to this paper: bacsu-YUKL

Title : The complete genome sequence of the gram-positive bacterium Bacillus subtilis - Kunst_1997_Nature_390_249
Author(s) : Kunst F , Ogasawara N , Moszer I , Albertini AM , Alloni G , Azevedo V , Bertero MG , Bessieres P , Bolotin A , Borchert S , Borriss R , Boursier L , Brans A , Braun M , Brignell SC , Bron S , Brouillet S , Bruschi CV , Caldwell B , Capuano V , Carter NM , Choi SK , Cordani JJ , Connerton IF , Cummings NJ , Daniel RA , Denziot F , Devine KM , Dusterhoft A , Ehrlich SD , Emmerson PT , Entian KD , Errington J , Fabret C , Ferrari E , Foulger D , Fritz C , Fujita M , Fujita Y , Fuma S , Galizzi A , Galleron N , Ghim SY , Glaser P , Goffeau A , Golightly EJ , Grandi G , Guiseppi G , Guy BJ , Haga K , Haiech J , Harwood CR , Henaut A , Hilbert H , Holsappel S , Hosono S , Hullo MF , Itaya M , Jones L , Joris B , Karamata D , Kasahara Y , Klaerr-Blanchard M , Klein C , Kobayashi Y , Koetter P , Koningstein G , Krogh S , Kumano M , Kurita K , Lapidus A , Lardinois S , Lauber J , Lazarevic V , Lee SM , Levine A , Liu H , Masuda S , Mauel C , Medigue C , Medina N , Mellado RP , Mizuno M , Moestl D , Nakai S , Noback M , Noone D , O'Reilly M , Ogawa K , Ogiwara A , Oudega B , Park SH , Parro V , Pohl TM , Portelle D , Porwollik S , Prescott AM , Presecan E , Pujic P , Purnelle B , Rapoport G , Rey M , Reynolds S , Rieger M , Rivolta C , Rocha E , Roche B , Rose M , Sadaie Y , Sato T , Scanlan E , Schleich S , Schroeter R , Scoffone F , Sekiguchi J , Sekowska A , Seror SJ , Serror P , Shin BS , Soldo B , Sorokin A , Tacconi E , Takagi T , Takahashi H , Takemaru K , Takeuchi M , Tamakoshi A , Tanaka T , Terpstra P , Togoni A , Tosato V , Uchiyama S , Vandebol M , Vannier F , Vassarotti A , Viari A , Wambutt R , Wedler H , Weitzenegger T , Winters P , Wipat A , Yamamoto H , Yamane K , Yasumoto K , Yata K , Yoshida K , Yoshikawa HF , Zumstein E , Yoshikawa H , Danchin A
Ref : Nature , 390 :249 , 1997
Abstract : Kunst_1997_Nature_390_249
ESTHER : Kunst_1997_Nature_390_249
PubMedSearch : Kunst_1997_Nature_390_249
PubMedID: 9384377
Gene_locus related to this paper: bacsu-CAH , bacsu-cbxnp , bacsu-lip , bacsu-LIPB , bacsu-PKSR , bacsu-pnbae , bacsu-PPSE , bacsu-srf4 , bacsu-srfac , bacsu-YBAC , bacsu-YBDG , bacsu-ybfk , bacsu-ycgS , bacsu-yczh , bacsu-YDEN , bacsu-ydjp , bacsu-yfhM , bacsu-yisY , bacsu-YITV , bacsu-yjau , bacsu-YJCH , bacsu-MHQD , bacsu-yqjl , bacsu-yqkd , bacsu-YRAK , bacsu-YTAP , bacsu-YTMA , bacsu-YTPA , bacsu-ytxm , bacsu-yugF , bacsu-YUII , bacsu-YUKL , bacsu-YVAK , bacsu-YvaM , bacsu-RsbQ