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References (8)

Title : Study of Protein Conformational Dynamics Using Hydrogen\/Deuterium Exchange Mass Spectrometry - Uhrik_2023_Methods.Mol.Biol_2652_293
Author(s) : Uhrik L , Henek T , Planas-Iglesias J , Kucera J , Damborsky J , Marek M , Hernychova L
Ref : Methods Mol Biol , 2652 :293 , 2023
Abstract : Uhrik_2023_Methods.Mol.Biol_2652_293
ESTHER : Uhrik_2023_Methods.Mol.Biol_2652_293
PubMedSearch : Uhrik_2023_Methods.Mol.Biol_2652_293
PubMedID: 37093484

Title : LoopGrafter: a web tool for transplanting dynamical loops for protein engineering - Planas-Iglesias_2022_Nucleic.Acids.Res__
Author(s) : Planas-Iglesias J , Opaleny F , Ulbrich P , Stourac J , Sanusi Z , Pinto GP , Schenkmayerova A , Byska J , Damborsky J , Kozlikova B , Bednar D
Ref : Nucleic Acids Research , : , 2022
Abstract : Planas-Iglesias_2022_Nucleic.Acids.Res__
ESTHER : Planas-Iglesias_2022_Nucleic.Acids.Res__
PubMedSearch : Planas-Iglesias_2022_Nucleic.Acids.Res__
PubMedID: 35438789

Title : Tools for computational design and high-throughput screening of therapeutic enzymes - Vasina_2022_Adv.Drug.Deliv.Rev_183_114143
Author(s) : Vasina M , Velecky J , Planas-Iglesias J , Marques SM , Skarupova J , Damborsky J , Bednar D , Mazurenko S , Prokop Z
Ref : Adv Drug Deliv Rev , 183 :114143 , 2022
Abstract : Vasina_2022_Adv.Drug.Deliv.Rev_183_114143
ESTHER : Vasina_2022_Adv.Drug.Deliv.Rev_183_114143
PubMedSearch : Vasina_2022_Adv.Drug.Deliv.Rev_183_114143
PubMedID: 35167900

Title : Engineering the protein dynamics of an ancestral luciferase - Schenkmayerova_2021_Nat.Commun_12_3616
Author(s) : Schenkmayerova A , Pinto GP , Toul M , Marek M , Hernychova L , Planas-Iglesias J , Daniel Liskova V , Pluskal D , Vasina M , Emond S , Dorr M , Chaloupkova R , Bednar D , Prokop Z , Hollfelder F , Bornscheuer UT , Damborsky J
Ref : Nat Commun , 12 :3616 , 2021
Abstract : Schenkmayerova_2021_Nat.Commun_12_3616
ESTHER : Schenkmayerova_2021_Nat.Commun_12_3616
PubMedSearch : Schenkmayerova_2021_Nat.Commun_12_3616
PubMedID: 34127663
Gene_locus related to this paper: renre-luc

Title : Web-based tools for computational enzyme design - Marques_2021_Curr.Opin.Struct.Biol_69_19
Author(s) : Marques SM , Planas-Iglesias J , Damborsky J
Ref : Current Opinion in Structural Biology , 69 :19 , 2021
Abstract : Marques_2021_Curr.Opin.Struct.Biol_69_19
ESTHER : Marques_2021_Curr.Opin.Struct.Biol_69_19
PubMedSearch : Marques_2021_Curr.Opin.Struct.Biol_69_19
PubMedID: 33667757

Title : Computational Enzyme Stabilization Can Affect Folding Energy Landscapes and Lead to Catalytically Enhanced Domain-Swapped Dimers - Markova_2021_ACS.Catal_11_12864
Author(s) : Markova K , Kunka A , Chmelova K , Havlasek M , Babkova P , Marques SM , Vasina M , Planas-Iglesias J , Chaloupkova R , Bednar D , Prokop Z , Damborsky J , Marek M
Ref : ACS Catal , 11 :12864 , 2021
Abstract : Markova_2021_ACS.Catal_11_12864
ESTHER : Markova_2021_ACS.Catal_11_12864
PubMedSearch : Markova_2021_ACS.Catal_11_12864
PubMedID:
Gene_locus related to this paper: rhoso-halo1

Title : Engineering Protein Dynamics of Ancestral Luciferase - Schenkmayerova_2020_Chemrxiv__
Author(s) : Schenkmayerova A , Pinto GP , Toul M , Marek M , Hernychova L , Planas-Iglesias J , Liskova V , Pluskal D , Vasina M , Emond S , Dorr M , Chaloupkova R , Bednar D , Prokop Z , Hollfelder F , Bornscheuer UT , Damborsky J
Ref : Chemrxiv , : , 2020
Abstract : Schenkmayerova_2020_Chemrxiv__
ESTHER : Schenkmayerova_2020_Chemrxiv__
PubMedSearch : Schenkmayerova_2020_Chemrxiv__
PubMedID:
Gene_locus related to this paper: renre-luc

Title : Deciphering the Structural Basis of High Thermostability of Dehalogenase from Psychrophilic Bacterium Marinobacter sp. ELB17 - Chrast_2019_Microorganisms_7_
Author(s) : Chrast L , Tratsiak K , Planas-Iglesias J , Daniel L , Prudnikova T , Brezovsky J , Bednar D , Kuta Smatanova I , Chaloupkova R , Damborsky J
Ref : Microorganisms , 7 : , 2019
Abstract : Chrast_2019_Microorganisms_7_
ESTHER : Chrast_2019_Microorganisms_7_
PubMedSearch : Chrast_2019_Microorganisms_7_
PubMedID: 31661858
Gene_locus related to this paper: 9alte-a3jb27