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| Title : Rapid whole-genome sequencing for surveillance of Salmonella enterica serovar enteritidis - den Bakker_2014_Emerg.Infect.Dis_20_1306 |
| Author(s) : den Bakker HC , Allard MW , Bopp D , Brown EW , Fontana J , Iqbal Z , Kinney A , Limberger R , Musser KA , Shudt M , Strain E , Wiedmann M , Wolfgang WJ |
| Ref : Emerg Infect Dis , 20 :1306 , 2014 |
| Abstract : den Bakker_2014_Emerg.Infect.Dis_20_1306 |
| ESTHER : den Bakker_2014_Emerg.Infect.Dis_20_1306 |
| PubMedSearch : den Bakker_2014_Emerg.Infect.Dis_20_1306 |
| PubMedID: 25062035 |
| Title : Fully assembled genome sequence for Salmonella enterica subsp. enterica Serovar Javiana CFSAN001992 - Allard_2013_Genome.Announc_1_e0008113 |
| Author(s) : Allard MW , Muruvanda T , Strain E , Timme R , Luo Y , Wang C , Keys CE , Payne J , Cooper T , Luong K , Song Y , Chin CS , Korlach J , Roberts RJ , Evans P , Musser SM , Brown EW |
| Ref : Genome Announc , 1 :e0008113 , 2013 |
| Abstract : Allard_2013_Genome.Announc_1_e0008113 |
| ESTHER : Allard_2013_Genome.Announc_1_e0008113 |
| PubMedSearch : Allard_2013_Genome.Announc_1_e0008113 |
| PubMedID: 23516208 |
| Title : Genome Sequences of Two Emerging Non-O157 Shiga Toxin-Producing Escherichia coli Strains - Cao_2013_Genome.Announc_1_E00200 |
| Author(s) : Cao G , Ju W , Rump L , Zhao S , Zou L , Wang C , Strain E , Luo Y , Timme R , Allard M , Brown E , Meng J |
| Ref : Genome Announc , 1 :E00200 , 2013 |
| Abstract : Cao_2013_Genome.Announc_1_E00200 |
| ESTHER : Cao_2013_Genome.Announc_1_E00200 |
| PubMedSearch : Cao_2013_Genome.Announc_1_E00200 |
| PubMedID: 23682138 |
| Gene_locus related to this paper: ecoli-d7xp23 , ecoli-ybff , ecoli-ycfp , ecoli-yiel , ecoli-yqia , ecoli-Z1930 , ecoli-YfhR |
| Title : On the evolutionary history, population genetics and diversity among isolates of Salmonella Enteritidis PFGE pattern JEGX01.0004 - Allard_2013_PLoS.One_8_e55254 |
| Author(s) : Allard MW , Luo Y , Strain E , Pettengill J , Timme R , Wang C , Li C , Keys CE , Zheng J , Stones R , Wilson MR , Musser SM , Brown EW |
| Ref : PLoS ONE , 8 :e55254 , 2013 |
| Abstract : Allard_2013_PLoS.One_8_e55254 |
| ESTHER : Allard_2013_PLoS.One_8_e55254 |
| PubMedSearch : Allard_2013_PLoS.One_8_e55254 |
| PubMedID: 23383127 |
| Gene_locus related to this paper: salty-STY1441 , salty-ycfp , salen-l6rcw4 |
| Title : Phylogenetic diversity of the enteric pathogen Salmonella enterica subsp. enterica inferred from genome-wide reference-free SNP characters - Timme_2013_Genome.Biol.Evol_5_2109 |
| Author(s) : Timme RE , Pettengill JB , Allard MW , Strain E , Barrangou R , Wehnes C , Van Kessel JS , Karns JS , Musser SM , Brown EW |
| Ref : Genome Biol Evol , 5 :2109 , 2013 |
| Abstract : Timme_2013_Genome.Biol.Evol_5_2109 |
| ESTHER : Timme_2013_Genome.Biol.Evol_5_2109 |
| PubMedSearch : Timme_2013_Genome.Biol.Evol_5_2109 |
| PubMedID: 24158624 |
| Gene_locus related to this paper: salty-STY1441 , salty-ycfp |
| Title : Phylogenetic analysis of non-O157 Shiga toxin-producing Escherichia coli strains by whole-genome sequencing - Ju_2012_J.Clin.Microbiol_50_4123 |
| Author(s) : Ju W , Cao G , Rump L , Strain E , Luo Y , Timme R , Allard M , Zhao S , Brown E , Meng J |
| Ref : J Clin Microbiol , 50 :4123 , 2012 |
| Abstract : Ju_2012_J.Clin.Microbiol_50_4123 |
| ESTHER : Ju_2012_J.Clin.Microbiol_50_4123 |
| PubMedSearch : Ju_2012_J.Clin.Microbiol_50_4123 |
| PubMedID: 23052305 |
| Gene_locus related to this paper: ecoli-d7xp23 , ecoli-MCMK , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-yhet , ecoli-yiel , ecoli-ypt1 , ecoli-yqia , ecoli-Z1341 , ecoli-Z1930 , ecoli-YfhR |
| Title : High resolution clustering of Salmonella enterica serovar Montevideo strains using a next-generation sequencing approach - Allard_2012_BMC.Genomics_13_32 |
| Author(s) : Allard MW , Luo Y , Strain E , Li C , Keys CE , Son I , Stones R , Musser SM , Brown EW |
| Ref : BMC Genomics , 13 :32 , 2012 |
| Abstract : Allard_2012_BMC.Genomics_13_32 |
| ESTHER : Allard_2012_BMC.Genomics_13_32 |
| PubMedSearch : Allard_2012_BMC.Genomics_13_32 |
| PubMedID: 22260654 |
| Gene_locus related to this paper: salen-OPDB , salti-q8z717 , salty-DLHH , salty-ENTF , salty-FES , salty-IROD , salty-IROE , salty-PLDB , salty-STY1441 , salty-yafa , salty-YBFF , salty-ycfp , salty-YFBB , salty-YQIA |
| Title : Draft genome sequences of eight Salmonella enterica serotype newport strains from diverse hosts and locations - Cao_2012_J.Bacteriol_194_5146 |
| Author(s) : Cao G , Zhao S , Strain E , Luo Y , Timme R , Wang C , Brown E , Meng J , Allard M |
| Ref : Journal of Bacteriology , 194 :5146 , 2012 |
| Abstract : Cao_2012_J.Bacteriol_194_5146 |
| ESTHER : Cao_2012_J.Bacteriol_194_5146 |
| PubMedSearch : Cao_2012_J.Bacteriol_194_5146 |
| PubMedID: 22933769 |
| Gene_locus related to this paper: salty-STY1441 |
| Title : Draft genome sequences of 21 Salmonella enterica serovar enteritidis strains - Timme_2012_J.Bacteriol_194_5994 |
| Author(s) : Timme RE , Allard MW , Luo Y , Strain E , Pettengill J , Wang C , Li C , Keys CE , Zheng J , Stones R , Wilson MR , Musser SM , Brown EW |
| Ref : Journal of Bacteriology , 194 :5994 , 2012 |
| Abstract : Timme_2012_J.Bacteriol_194_5994 |
| ESTHER : Timme_2012_J.Bacteriol_194_5994 |
| PubMedSearch : Timme_2012_J.Bacteriol_194_5994 |
| PubMedID: 23045502 |
| Gene_locus related to this paper: salty-STY1441 |
| Title : Identification of a salmonellosis outbreak by means of molecular sequencing - |
| Author(s) : Lienau EK , Strain E , Wang C , Zheng J , Ottesen AR , Keys CE , Hammack TS , Musser SM , Brown EW , Allard MW , Cao G , Meng J , Stones R |
| Ref : N Engl J Med , 364 :981 , 2011 |
| PubMedID: 21345093 |
| Gene_locus related to this paper: salen-OPDB , salti-q8z717 , salty-DLHH , salty-ENTF , salty-FES , salty-IROD , salty-IROE , salty-PLDB , salty-STM4506 , salty-STY1441 , salty-yafa , salty-YBFF , salty-ycfp , salty-YFBB , salty-YHET , salty-YQIA |