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| Title : Draft Sequencing of the Heterozygous Diploid Genome of Satsuma (Citrus unshiu Marc.) Using a Hybrid Assembly Approach - Shimizu_2017_Front.Genet_8_180 |
| Author(s) : Shimizu T , Tanizawa Y , Mochizuki T , Nagasaki H , Yoshioka T , Toyoda A , Fujiyama A , Kaminuma E , Nakamura Y |
| Ref : Front Genet , 8 :180 , 2017 |
| Abstract : Shimizu_2017_Front.Genet_8_180 |
| ESTHER : Shimizu_2017_Front.Genet_8_180 |
| PubMedSearch : Shimizu_2017_Front.Genet_8_180 |
| PubMedID: 29259619 |
| Gene_locus related to this paper: citsi-a0a067e7f4 , 9rosi-v4u6v9 , citsi-a0a067dhb0 , citsi-a0a067f614 , citun-a0a2h5ny34 , citsi-a0a067f6y7 , citcl-v4syg1 |
| Title : Complete genome sequence and expression profile of the commercial lytic enzyme producer Lysobacter enzymogenes M497-1 - Takami_2017_DNA.Res_24_169 |
| Author(s) : Takami H , Toyoda A , Uchiyama I , Itoh T , Takaki Y , Arai W , Nishi S , Kawai M , Shin-Ya K , Ikeda H |
| Ref : DNA Research , 24 :169 , 2017 |
| Abstract : Takami_2017_DNA.Res_24_169 |
| ESTHER : Takami_2017_DNA.Res_24_169 |
| PubMedSearch : Takami_2017_DNA.Res_24_169 |
| PubMedID: 28065880 |
| Gene_locus related to this paper: lysen-a0a1j1ebl3 , lysen-a0a1j1e5b0 , lysen-a0a0s2dfs0 |
| Title : The Gonium pectorale genome demonstrates co-option of cell cycle regulation during the evolution of multicellularity - Hanschen_2016_Nat.Commun_7_11370 |
| Author(s) : Hanschen ER , Marriage TN , Ferris PJ , Hamaji T , Toyoda A , Fujiyama A , Neme R , Noguchi H , Minakuchi Y , Suzuki M , Kawai-Toyooka H , Smith DR , Sparks H , Anderson J , Bakaric R , Luria V , Karger A , Kirschner MW , Durand PM , Michod RE , Nozaki H , Olson BJ |
| Ref : Nat Commun , 7 :11370 , 2016 |
| Abstract : Hanschen_2016_Nat.Commun_7_11370 |
| ESTHER : Hanschen_2016_Nat.Commun_7_11370 |
| PubMedSearch : Hanschen_2016_Nat.Commun_7_11370 |
| PubMedID: 27102219 |
| Gene_locus related to this paper: gonpe-a0a150g7b7 , gonpe-a0a150g7j0 , gonpe-a0a150fxi1 , gonpe-a0a150gb26 , gonpe-a0a150grd7 , gonpe-a0a150gvy9 , gonpe-a0a150h2v5 |
| Title : Extremotolerant tardigrade genome and improved radiotolerance of human cultured cells by tardigrade-unique protein - Hashimoto_2016_Nat.Commun_7_12808 |
| Author(s) : Hashimoto T , Horikawa DD , Saito Y , Kuwahara H , Kozuka-Hata H , Shin IT , Minakuchi Y , Ohishi K , Motoyama A , Aizu T , Enomoto A , Kondo K , Tanaka S , Hara Y , Koshikawa S , Sagara H , Miura T , Yokobori S , Miyagawa K , Suzuki Y , Kubo T , Oyama M , Kohara Y , Fujiyama A , Arakawa K , Katayama T , Toyoda A , Kunieda T |
| Ref : Nat Commun , 7 :12808 , 2016 |
| Abstract : Hashimoto_2016_Nat.Commun_7_12808 |
| ESTHER : Hashimoto_2016_Nat.Commun_7_12808 |
| PubMedSearch : Hashimoto_2016_Nat.Commun_7_12808 |
| PubMedID: 27649274 |
| Gene_locus related to this paper: ramva-a0a1d1uki4 , ramva-a0a1d1uvm7 , ramva-a0a1d1ula4 , ramva-a0a1d1v5e3 , ramva-a0a1d1unv1 , ramva-a0a1d1vjq5 , ramva-a0a1d1vlp2 , ramva-a0a1d1vh75 , ramva-a0a1d1vzz5 |
| Title : Complete Genome Sequence of Aurantimicrobium minutum Type Strain KNCT, a Planktonic Ultramicrobacterium Isolated from River Water - Nakai_2016_Genome.Announc_4_e00616 |
| Author(s) : Nakai R , Fujisawa T , Nakamura Y , Nishide H , Uchiyama I , Baba T , Toyoda A , Fujiyama A , Naganuma T , Niki H |
| Ref : Genome Announc , 4 : , 2016 |
| Abstract : Nakai_2016_Genome.Announc_4_e00616 |
| ESTHER : Nakai_2016_Genome.Announc_4_e00616 |
| PubMedSearch : Nakai_2016_Genome.Announc_4_e00616 |
| PubMedID: 27365350 |
| Gene_locus related to this paper: 9mico-a0a173lyl3 |
| Title : Complete Genome Sequence of a Phenanthrene Degrader, Mycobacterium sp. Strain EPa45 (NBRC 110737), Isolated from a Phenanthrene-Degrading Consortium - Kato_2015_Genome.Announc_3_e00782 |
| Author(s) : Kato H , Ogawa N , Ohtsubo Y , Oshima K , Toyoda A , Mori H , Nagata Y , Kurokawa K , Hattori M , Fujiyama A , Tsuda M |
| Ref : Genome Announc , 3 : , 2015 |
| Abstract : Kato_2015_Genome.Announc_3_e00782 |
| ESTHER : Kato_2015_Genome.Announc_3_e00782 |
| PubMedSearch : Kato_2015_Genome.Announc_3_e00782 |
| PubMedID: 26184940 |
| Gene_locus related to this paper: 9myco-a0a0g3iim6 , 9myco-a0a0g3ijm3 , 9myco-a0a0g3ipv9 , 9myco-a0a0g3iuf8 , 9myco-a0a0g3ivy5 , 9myco-a0a0g3ihb1 |
| Title : High frequency of phylogenetically diverse reductive dehalogenase-homologous genes in deep subseafloor sedimentary metagenomes - Kawai_2014_Front.Microbiol_5_80 |
| Author(s) : Kawai M , Futagami T , Toyoda A , Takaki Y , Nishi S , Hori S , Arai W , Tsubouchi T , Morono Y , Uchiyama I , Ito T , Fujiyama A , Inagaki F , Takami H |
| Ref : Front Microbiol , 5 :80 , 2014 |
| Abstract : Kawai_2014_Front.Microbiol_5_80 |
| ESTHER : Kawai_2014_Front.Microbiol_5_80 |
| PubMedSearch : Kawai_2014_Front.Microbiol_5_80 |
| PubMedID: 24624126 |
| Gene_locus related to this paper: 9zzzz-x0wci8 , 9zzzz-x1k9j7 , 9zzzz-x0se68 , 9zzzz-x0tpm6 , 9zzzz-x0tv89 , 9zzzz-x0ws69 , 9zzzz-x1tg33 , 9zzzz-x1anx0 , 9zzzz-x1m8t8 , 9zzzz-x1a5i7 , 9zzzz-x1k2t2 , 9zzzz-x0uzq5 |
| Title : Complete Genome Sequence of a Thermophilic Hydrogenotrophic Methanogen, Methanothermobacter sp. Strain CaT2 - Kosaka_2013_Genome.Announc_1_ |
| Author(s) : Kosaka T , Toh H , Toyoda A |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : Kosaka_2013_Genome.Announc_1_ |
| ESTHER : Kosaka_2013_Genome.Announc_1_ |
| PubMedSearch : Kosaka_2013_Genome.Announc_1_ |
| PubMedID: 23990577 |
| Gene_locus related to this paper: 9eury-t2gj08 |
| Title : A deeply branching thermophilic bacterium with an ancient acetyl-CoA pathway dominates a subsurface ecosystem - Takami_2012_PLoS.One_7_e30559 |
| Author(s) : Takami H , Noguchi H , Takaki Y , Uchiyama I , Toyoda A , Nishi S , Chee GJ , Arai W , Nunoura T , Itoh T , Hattori M , Takai K |
| Ref : PLoS ONE , 7 :e30559 , 2012 |
| Abstract : Takami_2012_PLoS.One_7_e30559 |
| ESTHER : Takami_2012_PLoS.One_7_e30559 |
| PubMedSearch : Takami_2012_PLoS.One_7_e30559 |
| PubMedID: 22303444 |
| Gene_locus related to this paper: 9bact-h5srl9 , 9chlr-h5sfm8 |
| Title : Whole genome assembly of a natto production strain Bacillus subtilis natto from very short read data - Nishito_2010_BMC.Genomics_11_243 |
| Author(s) : Nishito Y , Osana Y , Hachiya T , Popendorf K , Toyoda A , Fujiyama A , Itaya M , Sakakibara Y |
| Ref : BMC Genomics , 11 :243 , 2010 |
| Abstract : Nishito_2010_BMC.Genomics_11_243 |
| ESTHER : Nishito_2010_BMC.Genomics_11_243 |
| PubMedSearch : Nishito_2010_BMC.Genomics_11_243 |
| PubMedID: 20398357 |
| Gene_locus related to this paper: bacsu-CAH , bacsu-lip , bacsu-LIPB , bacsu-pnbae , bacsu-YBAC , bacsu-YDEN , bacsu-ydjp , bacsu-yfhM , bacsu-yisY , bacsu-YJCH , bacsu-YTMA , bacsu-YTPA , bacsu-ytxm , bacsu-YUII , bacsu-YVAK , bacsu-RsbQ |
| Title : Complete genome sequence of the wild-type commensal Escherichia coli strain SE15, belonging to phylogenetic group B2 - Toh_2010_J.Bacteriol_192_1165 |
| Author(s) : Toh H , Oshima K , Toyoda A , Ogura Y , Ooka T , Sasamoto H , Park SH , Iyoda S , Kurokawa K , Morita H , Itoh K , Taylor TD , Hayashi T , Hattori M |
| Ref : Journal of Bacteriology , 192 :1165 , 2010 |
| Abstract : Toh_2010_J.Bacteriol_192_1165 |
| ESTHER : Toh_2010_J.Bacteriol_192_1165 |
| PubMedSearch : Toh_2010_J.Bacteriol_192_1165 |
| PubMedID: 20008064 |
| Gene_locus related to this paper: ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-C0410 , ecoli-C2429 , ecoli-C4836 , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-ypfh , ecoli-ypt1 , ecoli-yqia , ecoli-YfhR , ecos5-d2nhh3 , yerpe-YBTT , ecolx-f4suw9 |
| Title : Comparative genomic analysis of 1047 completely sequenced cDNAs from an Arabidopsis-related model halophyte, Thellungiella halophila - Taji_2010_BMC.Plant.Biol_10_261 |
| Author(s) : Taji T , Komatsu K , Katori T , Kawasaki Y , Sakata Y , Tanaka S , Kobayashi M , Toyoda A , Seki M , Shinozaki K |
| Ref : BMC Plant Biol , 10 :261 , 2010 |
| Abstract : Taji_2010_BMC.Plant.Biol_10_261 |
| ESTHER : Taji_2010_BMC.Plant.Biol_10_261 |
| PubMedSearch : Taji_2010_BMC.Plant.Biol_10_261 |
| PubMedID: 21106055 |
| Gene_locus related to this paper: theha-e4mwi7 , theha-e4mwx5 , theha-e4mxu0 , eutsa-v4kvd3 |
| Title : Analysis of multiple occurrences of alternative splicing events in Arabidopsis thaliana using novel sequenced full-length cDNAs - Iida_2009_DNA.Res_16_155 |
| Author(s) : Iida K , Fukami-Kobayashi K , Toyoda A , Sakaki Y , Kobayashi M , Seki M , Shinozaki K |
| Ref : DNA Research , 16 :155 , 2009 |
| Abstract : Iida_2009_DNA.Res_16_155 |
| ESTHER : Iida_2009_DNA.Res_16_155 |
| PubMedSearch : Iida_2009_DNA.Res_16_155 |
| PubMedID: 19423640 |
| Gene_locus related to this paper: arath-AT2G42690 , arath-AT5G20060 , arath-eds1 , arath-MES2 , arath-o65713 , arath-pip , arath-Q8LFB7 , arath-q66gm8 , arath-B9DFR3 |
| Title : Large-scale collection and annotation of full-length enriched cDNAs from a model halophyte, Thellungiella halophila - Taji_2008_BMC.Plant.Biol_8_115 |
| Author(s) : Taji T , Sakurai T , Mochida K , Ishiwata A , Kurotani A , Totoki Y , Toyoda A , Sakaki Y , Seki M , Ono H , Sakata Y , Tanaka S , Shinozaki K |
| Ref : BMC Plant Biol , 8 :115 , 2008 |
| Abstract : Taji_2008_BMC.Plant.Biol_8_115 |
| ESTHER : Taji_2008_BMC.Plant.Biol_8_115 |
| PubMedSearch : Taji_2008_BMC.Plant.Biol_8_115 |
| PubMedID: 19014467 |
| Gene_locus related to this paper: theha-e4mwi7 , theha-e4mwx5 , theha-e4mxu0 , eutsa-v4kvd3 |
| Title : Human chromosome 11 DNA sequence and analysis including novel gene identification - Taylor_2006_Nature_440_497 |
| Author(s) : Taylor TD , Noguchi H , Totoki Y , Toyoda A , Kuroki Y , Dewar K , Lloyd C , Itoh T , Takeda T , Kim DW , She X , Barlow KF , Bloom T , Bruford E , Chang JL , Cuomo CA , Eichler E , Fitzgerald MG , Jaffe DB , LaButti K , Nicol R , Park HS , Seaman C , Sougnez C , Yang X , Zimmer AR , Zody MC , Birren BW , Nusbaum C , Fujiyama A , Hattori M , Rogers J , Lander ES , Sakaki Y |
| Ref : Nature , 440 :497 , 2006 |
| Abstract : Taylor_2006_Nature_440_497 |
| ESTHER : Taylor_2006_Nature_440_497 |
| PubMedSearch : Taylor_2006_Nature_440_497 |
| PubMedID: 16554811 |
| Gene_locus related to this paper: human-PRCP |
| Title : DNA sequence and analysis of human chromosome 18 - Nusbaum_2005_Nature_437_551 |
| Author(s) : Nusbaum C , Zody MC , Borowsky ML , Kamal M , Kodira CD , Taylor TD , Whittaker CA , Chang JL , Cuomo CA , Dewar K , Fitzgerald MG , Yang X , Abouelleil A , Allen NR , Anderson S , Bloom T , Bugalter B , Butler J , Cook A , Decaprio D , Engels R , Garber M , Gnirke A , Hafez N , Hall JL , Norman CH , Itoh T , Jaffe DB , Kuroki Y , Lehoczky J , Lui A , Macdonald P , Mauceli E , Mikkelsen TS , Naylor JW , Nicol R , Nguyen C , Noguchi H , O'Leary SB , O'Neill K , Piqani B , Smith CL , Talamas JA , Topham K , Totoki Y , Toyoda A , Wain HM , Young SK , Zeng Q , Zimmer AR , Fujiyama A , Hattori M , Birren BW , Sakaki Y , Lander ES |
| Ref : Nature , 437 :551 , 2005 |
| Abstract : Nusbaum_2005_Nature_437_551 |
| ESTHER : Nusbaum_2005_Nature_437_551 |
| PubMedSearch : Nusbaum_2005_Nature_437_551 |
| PubMedID: 16177791 |
| Gene_locus related to this paper: human-LIPG |
| Title : DNA sequence and comparative analysis of chimpanzee chromosome 22 - Watanabe_2004_Nature_429_382 |
| Author(s) : Watanabe H , Fujiyama A , Hattori M , Taylor TD , Toyoda A , Kuroki Y , Noguchi H , BenKahla A , Lehrach H , Sudbrak R , Kube M , Taenzer S , Galgoczy P , Platzer M , Scharfe M , Nordsiek G , Blocker H , Hellmann I , Khaitovich P , Paabo S , Reinhardt R , Zheng HJ , Zhang XL , Zhu GF , Wang BF , Fu G , Ren SX , Zhao GP , Chen Z , Lee YS , Cheong JE , Choi SH , Wu KM , Liu TT , Hsiao KJ , Tsai SF , Kim CG , S OO , Kitano T , Kohara Y , Saitou N , Park HS , Wang SY , Yaspo ML , Sakaki Y |
| Ref : Nature , 429 :382 , 2004 |
| Abstract : Watanabe_2004_Nature_429_382 |
| ESTHER : Watanabe_2004_Nature_429_382 |
| PubMedSearch : Watanabe_2004_Nature_429_382 |
| PubMedID: 15164055 |
| Gene_locus related to this paper: pantr-a0a2j8lmv7 |
| Title : A novel multiple PDZ domain-containing molecule interacting with N-methyl-D-aspartate receptors and neuronal cell adhesion proteins - Hirao_1998_J.Biol.Chem_273_21105 |
| Author(s) : Hirao K , Hata Y , Ide N , Takeuchi M , Irie M , Yao I , Deguchi M , Toyoda A , Sudhof TC , Takai Y |
| Ref : Journal of Biological Chemistry , 273 :21105 , 1998 |
| Abstract : Hirao_1998_J.Biol.Chem_273_21105 |
| ESTHER : Hirao_1998_J.Biol.Chem_273_21105 |
| PubMedSearch : Hirao_1998_J.Biol.Chem_273_21105 |
| PubMedID: 9694864 |
| Gene_locus related to this paper: ratno-1neur |
| Title : Binding of neuroligins to PSD-95 - Irie_1997_Science_277_1511 |
| Author(s) : Irie M , Hata Y , Takeuchi M , Ichtchenko K , Toyoda A , Hirao K , Takai Y , Rosahl TW , Sudhof TC |
| Ref : Science , 277 :1511 , 1997 |
| Abstract : Irie_1997_Science_277_1511 |
| ESTHER : Irie_1997_Science_277_1511 |
| PubMedSearch : Irie_1997_Science_277_1511 |
| PubMedID: 9278515 |
| Gene_locus related to this paper: human-NLGN1 , human-NLGN2 , human-NLGN3 , human-NLGN4X |
| Title : Possible nicotinic receptor-mediated modulation of synaptic transmission in nucleus of the solitary tract - Shiraki_1997_Am.J.Physiol_272_R869 |
| Author(s) : Shiraki T , Toyoda A , Sugino H , Hori A , Kobayashi S |
| Ref : American Journal of Physiology , 272 :R869 , 1997 |
| Abstract : Shiraki_1997_Am.J.Physiol_272_R869 |
| ESTHER : Shiraki_1997_Am.J.Physiol_272_R869 |
| PubMedSearch : Shiraki_1997_Am.J.Physiol_272_R869 |
| PubMedID: 9087649 |