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| Title : Intestinal Permeability of Drugs in Caco-2 Cells Cultured in Microfluidic Devices - Sasaki_2022_Biol.Pharm.Bull_45_1246 |
| Author(s) : Sasaki Y , Tatsuoka H , Tsuda M , Sumi T , Eguchi Y , So K , Higuchi Y , Takayama K , Torisawa Y , Yamashita F |
| Ref : Biol Pharm Bull , 45 :1246 , 2022 |
| Abstract : Sasaki_2022_Biol.Pharm.Bull_45_1246 |
| ESTHER : Sasaki_2022_Biol.Pharm.Bull_45_1246 |
| PubMedSearch : Sasaki_2022_Biol.Pharm.Bull_45_1246 |
| PubMedID: 36047192 |
| Title : Non-neuronal cardiac cholinergic system influences CNS via the vagus nerve to acquire a stress-refractory propensity - Oikawa_2016_Clin.Sci.(Lond)_130_1913 |
| Author(s) : Oikawa S , Kai Y , Tsuda M , Ohata H , Mano A , Mizoguchi N , Sugama S , Nemoto T , Suzuki K , Kurabayashi A , Muramoto K , Kaneda M , Kakinuma Y |
| Ref : Clinical Science (Lond) , 130 :1913 , 2016 |
| Abstract : Oikawa_2016_Clin.Sci.(Lond)_130_1913 |
| ESTHER : Oikawa_2016_Clin.Sci.(Lond)_130_1913 |
| PubMedSearch : Oikawa_2016_Clin.Sci.(Lond)_130_1913 |
| PubMedID: 27528769 |
| Title : Complete Genome Sequence of a Phenanthrene Degrader, Mycobacterium sp. Strain EPa45 (NBRC 110737), Isolated from a Phenanthrene-Degrading Consortium - Kato_2015_Genome.Announc_3_e00782 |
| Author(s) : Kato H , Ogawa N , Ohtsubo Y , Oshima K , Toyoda A , Mori H , Nagata Y , Kurokawa K , Hattori M , Fujiyama A , Tsuda M |
| Ref : Genome Announc , 3 : , 2015 |
| Abstract : Kato_2015_Genome.Announc_3_e00782 |
| ESTHER : Kato_2015_Genome.Announc_3_e00782 |
| PubMedSearch : Kato_2015_Genome.Announc_3_e00782 |
| PubMedID: 26184940 |
| Gene_locus related to this paper: 9myco-a0a0g3iim6 , 9myco-a0a0g3ijm3 , 9myco-a0a0g3ipv9 , 9myco-a0a0g3iuf8 , 9myco-a0a0g3ivy5 , 9myco-a0a0g3ihb1 |
| Title : Complete Genome Sequence of Polyvinyl Alcohol-Degrading Strain Sphingopyxis sp. 113P3 (NBRC 111507) - Ohtsubo_2015_Genome.Announc_3_e01169 |
| Author(s) : Ohtsubo Y , Nagata Y , Numata M , Tsuchikane K , Hosoyama A , Yamazoe A , Tsuda M , Fujita N , Kawai F |
| Ref : Genome Announc , 3 :e01169 , 2015 |
| Abstract : Ohtsubo_2015_Genome.Announc_3_e01169 |
| ESTHER : Ohtsubo_2015_Genome.Announc_3_e01169 |
| PubMedSearch : Ohtsubo_2015_Genome.Announc_3_e01169 |
| PubMedID: 26472829 |
| Gene_locus related to this paper: sphs1-a0a0m4cze0 |
| Title : Properties and biotechnological applications of natural and engineered haloalkane dehalogenases - Nagata_2015_Appl.Microbiol.Biotechnol_99_9865 |
| Author(s) : Nagata Y , Ohtsubo Y , Tsuda M |
| Ref : Applied Microbiology & Biotechnology , 99 :9865 , 2015 |
| Abstract : Nagata_2015_Appl.Microbiol.Biotechnol_99_9865 |
| ESTHER : Nagata_2015_Appl.Microbiol.Biotechnol_99_9865 |
| PubMedSearch : Nagata_2015_Appl.Microbiol.Biotechnol_99_9865 |
| PubMedID: 26373728 |
| Title : Bacterial clade with the ribosomal RNA operon on a small plasmid rather than the chromosome - Anda_2015_Proc.Natl.Acad.Sci.U.S.A_112_14343 |
| Author(s) : Anda M , Ohtsubo Y , Okubo T , Sugawara M , Nagata Y , Tsuda M , Minamisawa K , Mitsui H |
| Ref : Proc Natl Acad Sci U S A , 112 :14343 , 2015 |
| Abstract : Anda_2015_Proc.Natl.Acad.Sci.U.S.A_112_14343 |
| ESTHER : Anda_2015_Proc.Natl.Acad.Sci.U.S.A_112_14343 |
| PubMedSearch : Anda_2015_Proc.Natl.Acad.Sci.U.S.A_112_14343 |
| PubMedID: 26534993 |
| Gene_locus related to this paper: 9rhiz-a0a0s2en26 , 9rhiz-a0a0p0z830 , 9rhiz-a0a0p0z878 , 9rhiz-a0a0p0z9k0 , 9rhiz-a0a0s2epz8 |
| Title : Complete Genome Sequence of Polypropylene Glycol- and Polyethylene Glycol-Degrading Sphingopyxis macrogoltabida Strain EY-1 - Ohtsubo_2015_Genome.Announc_3_e01399 |
| Author(s) : Ohtsubo Y , Nagata Y , Numata M , Tsuchikane K , Hosoyama A , Yamazoe A , Tsuda M , Fujita N , Kawai F |
| Ref : Genome Announc , 3 : , 2015 |
| Abstract : Ohtsubo_2015_Genome.Announc_3_e01399 |
| ESTHER : Ohtsubo_2015_Genome.Announc_3_e01399 |
| PubMedSearch : Ohtsubo_2015_Genome.Announc_3_e01399 |
| PubMedID: 26634754 |
| Gene_locus related to this paper: sphmc-a0a0n9ujk2 |
| Title : Complete Genome Sequence of Pseudomonas sp. Strain TKP, Isolated from a gamma-Hexachlorocyclohexane-Degrading Mixed Culture - Ohtsubo_2014_Genome.Announc_2_e01241 |
| Author(s) : Ohtsubo Y , Kishida K , Sato T , Tabata M , Kawasumi T , Ogura Y , Hayashi T , Tsuda M , Nagata Y |
| Ref : Genome Announc , 2 : , 2014 |
| Abstract : Ohtsubo_2014_Genome.Announc_2_e01241 |
| ESTHER : Ohtsubo_2014_Genome.Announc_2_e01241 |
| PubMedSearch : Ohtsubo_2014_Genome.Announc_2_e01241 |
| PubMedID: 24482516 |
| Gene_locus related to this paper: psefl-e2xn15 , psefs-c3k632 , psefs-laaa , psefs-c3k813 , psefl-e2xkc8 , 9psed-v9qxq1 , 9psed-v9qr47 |
| Title : Complete Genome Sequence of Pseudomonas aeruginosa MTB-1, Isolated from a Microbial Community Enriched by the Technical Formulation of Hexachlorocyclohexane - Ohtsubo_2014_Genome.Announc_2_e01130 |
| Author(s) : Ohtsubo Y , Sato T , Kishida K , Tabata M , Ogura Y , Hayashi T , Tsuda M , Nagata Y |
| Ref : Genome Announc , 2 : , 2014 |
| Abstract : Ohtsubo_2014_Genome.Announc_2_e01130 |
| ESTHER : Ohtsubo_2014_Genome.Announc_2_e01130 |
| PubMedSearch : Ohtsubo_2014_Genome.Announc_2_e01130 |
| PubMedID: 24459257 |
| Gene_locus related to this paper: pseae-PA3695 , pseae-PA5080 , pseae-q9i252 |
| Title : Complete Genome Sequence of the Thermophilic Polychlorinated Biphenyl Degrader Geobacillus sp. Strain JF8 (NBRC 109937) - Shintani_2014_Genome.Announc_2_e01213 |
| Author(s) : Shintani M , Ohtsubo Y , Fukuda K , Hosoyama A , Ohji S , Yamazoe A , Fujita N , Nagata Y , Tsuda M , Hatta T , Kimbara K |
| Ref : Genome Announc , 2 : , 2014 |
| Abstract : Shintani_2014_Genome.Announc_2_e01213 |
| ESTHER : Shintani_2014_Genome.Announc_2_e01213 |
| PubMedSearch : Shintani_2014_Genome.Announc_2_e01213 |
| PubMedID: 24459274 |
| Gene_locus related to this paper: geotn-a4isp0 , 9baci-s5yvc0 , 9baci-s5yzj8 |
| Title : Stepwise enhancement of catalytic performance of haloalkane dehalogenase LinB towards beta-hexachlorocyclohexane - Moriuchi_2014_AMB.Express_4_72 |
| Author(s) : Moriuchi R , Tanaka H , Nikawadori Y , Ishitsuka M , Ito M , Ohtsubo Y , Tsuda M , Damborsky J , Prokop Z , Nagata Y |
| Ref : AMB Express , 4 :72 , 2014 |
| Abstract : Moriuchi_2014_AMB.Express_4_72 |
| ESTHER : Moriuchi_2014_AMB.Express_4_72 |
| PubMedSearch : Moriuchi_2014_AMB.Express_4_72 |
| PubMedID: 25401073 |
| Title : Senescent case of cholesterol ester storage disease that progressed to liver cirrhosis with a novel mutation (N250H) of lysosomal acid lipase gene - Kojima_2013_Hepatol.Res_43_1361 |
| Author(s) : Kojima S , Watanabe N , Takashimizu S , Kagawa T , Shiraishi K , Koizumi J , Hirabayashi K , Ohkubo T , Kamiguchi H , Tsuda M , Mine T |
| Ref : Hepatol Res , 43 :1361 , 2013 |
| Abstract : Kojima_2013_Hepatol.Res_43_1361 |
| ESTHER : Kojima_2013_Hepatol.Res_43_1361 |
| PubMedSearch : Kojima_2013_Hepatol.Res_43_1361 |
| PubMedID: 23675960 |
| Gene_locus related to this paper: human-LIPA |
| Title : Heart-specific overexpression of choline acetyltransferase gene protects murine heart against ischemia through hypoxia-inducible factor-1alpha-related defense mechanisms - Kakinuma_2013_J.Am.Heart.Assoc_2_e004887 |
| Author(s) : Kakinuma Y , Tsuda M , Okazaki K , Akiyama T , Arikawa M , Noguchi T , Sato T |
| Ref : J Am Heart Assoc , 2 :e004887 , 2013 |
| Abstract : Kakinuma_2013_J.Am.Heart.Assoc_2_e004887 |
| ESTHER : Kakinuma_2013_J.Am.Heart.Assoc_2_e004887 |
| PubMedSearch : Kakinuma_2013_J.Am.Heart.Assoc_2_e004887 |
| PubMedID: 23525439 |
| Title : Complete Genome Sequence of the gamma-Hexachlorocyclohexane-Degrading Bacterium Sphingomonas sp. Strain MM-1 - Tabata_2013_Genome.Announc_1_e00247 |
| Author(s) : Tabata M , Ohtsubo Y , Ohhata S , Tsuda M , Nagata Y |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : Tabata_2013_Genome.Announc_1_e00247 |
| ESTHER : Tabata_2013_Genome.Announc_1_e00247 |
| PubMedSearch : Tabata_2013_Genome.Announc_1_e00247 |
| PubMedID: 23682148 |
| Gene_locus related to this paper: 9sphn-m4s0a2 , 9sphn-m4sjq0 , 9sphn-m4s4n0 , 9sphn-m4rwk9 , 9sphn-m4s1q7 |
| Title : Crystal Structure and Site-Directed Mutagenesis Analyses of Haloalkane Dehalogenase LinB from Sphingobium sp. Strain MI1205 - Okai_2013_J.Bacteriol_195_2642 |
| Author(s) : Okai M , Ohtsuka J , Imai LF , Mase T , Moriuchi R , Tsuda M , Nagata K , Nagata Y , Tanokura M |
| Ref : Journal of Bacteriology , 195 :2642 , 2013 |
| Abstract : Okai_2013_J.Bacteriol_195_2642 |
| ESTHER : Okai_2013_J.Bacteriol_195_2642 |
| PubMedSearch : Okai_2013_J.Bacteriol_195_2642 |
| PubMedID: 23564170 |
| Gene_locus related to this paper: sphpi-q6vqx3 |
| Title : Complete genome sequence of Acidovorax sp. strain KKS102, a polychlorinated-biphenyl degrader - Ohtsubo_2012_J.Bacteriol_194_6970 |
| Author(s) : Ohtsubo Y , Maruyama F , Mitsui H , Nagata Y , Tsuda M |
| Ref : Journal of Bacteriology , 194 :6970 , 2012 |
| Abstract : Ohtsubo_2012_J.Bacteriol_194_6970 |
| ESTHER : Ohtsubo_2012_J.Bacteriol_194_6970 |
| PubMedSearch : Ohtsubo_2012_J.Bacteriol_194_6970 |
| PubMedID: 23209225 |
| Gene_locus related to this paper: 9burk-k0hvd1 , 9burk-k0hw51 , 9burk-k0hxu4 , 9burk-k0i5a9 , 9burk-k0i8t8 , 9burk-k0i3l8 , 9burk-k0i392 |
| Title : A complete mitochondrial genome sequence of Ogura-type male-sterile cytoplasm and its comparative analysis with that of normal cytoplasm in radish (Raphanus sativus L.) - Tanaka_2012_BMC.Genomics_13_352 |
| Author(s) : Tanaka Y , Tsuda M , Yasumoto K , Yamagishi H , Terachi T |
| Ref : BMC Genomics , 13 :352 , 2012 |
| Abstract : Tanaka_2012_BMC.Genomics_13_352 |
| ESTHER : Tanaka_2012_BMC.Genomics_13_352 |
| PubMedSearch : Tanaka_2012_BMC.Genomics_13_352 |
| PubMedID: 22846596 |
| Gene_locus related to this paper: rapsa-a0a6j0jyp3 , rapsa-a0a6j0lzs2 , rapsa-a0a6j0lba8 , rapsa-a0a6j0lmu0 |
| Title : The lin genes for gamma-hexachlorocyclohexane degradation in Sphingomonas sp. MM-1 proved to be dispersed across multiple plasmids - Tabata_2011_Biosci.Biotechnol.Biochem_75_466 |
| Author(s) : Tabata M , Endo R , Ito M , Ohtsubo Y , Kumar A , Tsuda M , Nagata Y |
| Ref : Biosci Biotechnol Biochem , 75 :466 , 2011 |
| Abstract : Tabata_2011_Biosci.Biotechnol.Biochem_75_466 |
| ESTHER : Tabata_2011_Biosci.Biotechnol.Biochem_75_466 |
| PubMedSearch : Tabata_2011_Biosci.Biotechnol.Biochem_75_466 |
| PubMedID: 21389627 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Complete genome sequence of the representative gamma-hexachlorocyclohexane-degrading bacterium Sphingobium japonicum UT26 - Nagata_2010_J.Bacteriol_192_5852 |
| Author(s) : Nagata Y , Ohtsubo Y , Endo R , Ichikawa N , Ankai A , Oguchi A , Fukui S , Fujita N , Tsuda M |
| Ref : Journal of Bacteriology , 192 :5852 , 2010 |
| Abstract : Nagata_2010_J.Bacteriol_192_5852 |
| ESTHER : Nagata_2010_J.Bacteriol_192_5852 |
| PubMedSearch : Nagata_2010_J.Bacteriol_192_5852 |
| PubMedID: 20817768 |
| Gene_locus related to this paper: psepa-q6vpf3 , sphju-d4z1p3 , sphju-d4z3u6 , sphpi-linb , sphju-d4yyy8 |
| Title : Complete nucleotide sequence of TOL plasmid pDK1 provides evidence for evolutionary history of IncP-7 catabolic plasmids - Yano_2010_J.Bacteriol_192_4337 |
| Author(s) : Yano H , Miyakoshi M , Ohshima K , Tabata M , Nagata Y , Hattori M , Tsuda M |
| Ref : Journal of Bacteriology , 192 :4337 , 2010 |
| Abstract : Yano_2010_J.Bacteriol_192_4337 |
| ESTHER : Yano_2010_J.Bacteriol_192_4337 |
| PubMedSearch : Yano_2010_J.Bacteriol_192_4337 |
| PubMedID: 20581207 |
| Title : Redesigning dehalogenase access tunnels as a strategy for degrading an anthropogenic substrate - Pavlova_2009_Nat.Chem.Biol_5_727 |
| Author(s) : Pavlova M , Klvana M , Prokop Z , Chaloupkova R , Banas P , Otyepka M , Wade RC , Tsuda M , Nagata Y , Damborsky J |
| Ref : Nat Chemical Biology , 5 :727 , 2009 |
| Abstract : Pavlova_2009_Nat.Chem.Biol_5_727 |
| ESTHER : Pavlova_2009_Nat.Chem.Biol_5_727 |
| PubMedSearch : Pavlova_2009_Nat.Chem.Biol_5_727 |
| PubMedID: 19701186 |
| Title : Novel organization of aromatic degradation pathway genes in a microbial community as revealed by metagenomic analysis - Suenaga_2009_ISME.J_3_1335 |
| Author(s) : Suenaga H , Koyama Y , Miyakoshi M , Miyazaki R , Yano H , Sota M , Ohtsubo Y , Tsuda M , Miyazaki K |
| Ref : Isme J , 3 :1335 , 2009 |
| Abstract : Suenaga_2009_ISME.J_3_1335 |
| ESTHER : Suenaga_2009_ISME.J_3_1335 |
| PubMedSearch : Suenaga_2009_ISME.J_3_1335 |
| PubMedID: 19587775 |
| Gene_locus related to this paper: 9bact-c6kti0 , 9bact-c6ktz1 , 9bact-c6ku06 , 9bact-c6ku85 , 9bact-c6kub4 , 9bact-c6kud7 , 9bact-c6kwi7 , 9bact-c6l0y5 , 9burk-q0gqt7 , psepu-TDNF |
| Title : Glucose regulation of dipeptidyl peptidase IV gene expression is mediated by hepatocyte nuclear factor-1alpha in epithelial intestinal cells - Gu_2008_Clin.Exp.Pharmacol.Physiol_35_1433 |
| Author(s) : Gu N , Tsuda M , Matsunaga T , Adachi T , Yasuda K , Ishihara A , Tsuda K |
| Ref : Clinical & Experimental Pharmacology & Physiology , 35 :1433 , 2008 |
| Abstract : Gu_2008_Clin.Exp.Pharmacol.Physiol_35_1433 |
| ESTHER : Gu_2008_Clin.Exp.Pharmacol.Physiol_35_1433 |
| PubMedSearch : Gu_2008_Clin.Exp.Pharmacol.Physiol_35_1433 |
| PubMedID: 18671716 |
| Title : Insertion sequence-based cassette PCR: cultivation-independent isolation of gamma-hexachlorocyclohexane-degrading genes from soil DNA - Fuchu_2008_Appl.Microbiol.Biotechnol_79_627 |
| Author(s) : Fuchu G , Ohtsubo Y , Ito M , Miyazaki R , Ono A , Nagata Y , Tsuda M |
| Ref : Applied Microbiology & Biotechnology , 79 :627 , 2008 |
| Abstract : Fuchu_2008_Appl.Microbiol.Biotechnol_79_627 |
| ESTHER : Fuchu_2008_Appl.Microbiol.Biotechnol_79_627 |
| PubMedSearch : Fuchu_2008_Appl.Microbiol.Biotechnol_79_627 |
| PubMedID: 18425509 |
| Gene_locus related to this paper: psepa-q6vpf3 , sphpi-linb |
| Title : Complete sequence determination combined with analysis of transposition\/site-specific recombination events to explain genetic organization of IncP-7 TOL plasmid pWW53 and related mobile genetic elements - Yano_2007_J.Mol.Biol_369_11 |
| Author(s) : Yano H , Garruto CE , Sota M , Ohtsubo Y , Nagata Y , Zylstra GJ , Williams PA , Tsuda M |
| Ref : Journal of Molecular Biology , 369 :11 , 2007 |
| Abstract : Yano_2007_J.Mol.Biol_369_11 |
| ESTHER : Yano_2007_J.Mol.Biol_369_11 |
| PubMedSearch : Yano_2007_J.Mol.Biol_369_11 |
| PubMedID: 17408691 |
| Title : The identification of catalytic pentad in the haloalkane dehalogenase DhmA from Mycobacterium avium N85: reaction mechanism and molecular evolution - Pavlova_2007_J.Struct.Biol_157_384 |
| Author(s) : Pavlova M , Klvana M , Jesenska A , Prokop Z , Konecna H , Sato T , Tsuda M , Nagata Y , Damborsky J |
| Ref : J Struct Biol , 157 :384 , 2007 |
| Abstract : Pavlova_2007_J.Struct.Biol_157_384 |
| ESTHER : Pavlova_2007_J.Struct.Biol_157_384 |
| PubMedSearch : Pavlova_2007_J.Struct.Biol_157_384 |
| PubMedID: 17084094 |
| Title : Degradation of beta-hexachlorocyclohexane by haloalkane dehalogenase LinB from gamma-hexachlorocyclohexane-utilizing bacterium Sphingobium sp. MI1205 - Ito_2007_Arch.Microbiol_188_313 |
| Author(s) : Ito M , Prokop Z , Klvana M , Otsubo Y , Tsuda M , Damborsky J , Nagata Y |
| Ref : Arch Microbiol , 188 :313 , 2007 |
| Abstract : Ito_2007_Arch.Microbiol_188_313 |
| ESTHER : Ito_2007_Arch.Microbiol_188_313 |
| PubMedSearch : Ito_2007_Arch.Microbiol_188_313 |
| PubMedID: 17516046 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Crystallization and preliminary crystallographic analysis of a haloalkane dehalogenase, DbjA, from Bradyrhizobium japonicum USDA110 - Sato_2007_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_63_294 |
| Author(s) : Sato Y , Natsume R , Tsuda M , Damborsky J , Nagata Y , Senda T |
| Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 63 :294 , 2007 |
| Abstract : Sato_2007_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_63_294 |
| ESTHER : Sato_2007_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_63_294 |
| PubMedSearch : Sato_2007_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_63_294 |
| PubMedID: 17401198 |
| Title : Identification of a response regulator gene for catabolite control from a PCB-degrading beta-proteobacteria, Acidovorax sp. KKS102 - Ohtsubo_2006_Mol.Microbiol_60_1563 |
| Author(s) : Ohtsubo Y , Goto H , Nagata Y , Kudo T , Tsuda M |
| Ref : Molecular Microbiology , 60 :1563 , 2006 |
| Abstract : Ohtsubo_2006_Mol.Microbiol_60_1563 |
| ESTHER : Ohtsubo_2006_Mol.Microbiol_60_1563 |
| PubMedSearch : Ohtsubo_2006_Mol.Microbiol_60_1563 |
| PubMedID: 16796688 |
| Title : Comparative analysis of argK-tox clusters and their flanking regions in phaseolotoxin-producing Pseudomonas syringae pathovars - Genka_2006_J.Mol.Evol_63_401 |
| Author(s) : Genka H , Baba T , Tsuda M , Kanaya S , Mori H , Yoshida T , Noguchi MT , Tsuchiya K , Sawada H |
| Ref : Journal of Molecular Evolution , 63 :401 , 2006 |
| Abstract : Genka_2006_J.Mol.Evol_63_401 |
| ESTHER : Genka_2006_J.Mol.Evol_63_401 |
| PubMedSearch : Genka_2006_J.Mol.Evol_63_401 |
| PubMedID: 16927007 |
| Gene_locus related to this paper: psesy-PSPTO4540 |
| Title : Genomic and functional analysis of the IncP-9 naphthalene-catabolic plasmid NAH7 and its transposon Tn4655 suggests catabolic gene spread by a tyrosine recombinase - Sota_2006_J.Bacteriol_188_4057 |
| Author(s) : Sota M , Yano H , Ono A , Miyazaki R , Ishii H , Genka H , Top EM , Tsuda M |
| Ref : Journal of Bacteriology , 188 :4057 , 2006 |
| Abstract : Sota_2006_J.Bacteriol_188_4057 |
| ESTHER : Sota_2006_J.Bacteriol_188_4057 |
| PubMedSearch : Sota_2006_J.Bacteriol_188_4057 |
| PubMedID: 16707697 |
| Gene_locus related to this paper: psepu-q1xgk7 |
| Title : Complete nucleotide sequence of an exogenously isolated plasmid, pLB1, involved in gamma-hexachlorocyclohexane degradation - Miyazaki_2006_Appl.Environ.Microbiol_72_6923 |
| Author(s) : Miyazaki R , Sato Y , Ito M , Ohtsubo Y , Nagata Y , Tsuda M |
| Ref : Applied Environmental Microbiology , 72 :6923 , 2006 |
| Abstract : Miyazaki_2006_Appl.Environ.Microbiol_72_6923 |
| ESTHER : Miyazaki_2006_Appl.Environ.Microbiol_72_6923 |
| PubMedSearch : Miyazaki_2006_Appl.Environ.Microbiol_72_6923 |
| PubMedID: 16963556 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Two rhizobial strains, Mesorhizobium loti MAFF303099 and Bradyrhizobium japonicum USDA110, encode haloalkane dehalogenases with novel structures and substrate specificities - Sato_2005_Appl.Environ.Microbiol_71_4372 |
| Author(s) : Sato Y , Monincova M , Chaloupkova R , Prokop Z , Ohtsubo Y , Minamisawa K , Tsuda M , Damborsky J , Nagata Y |
| Ref : Applied Environmental Microbiology , 71 :4372 , 2005 |
| Abstract : Sato_2005_Appl.Environ.Microbiol_71_4372 |
| ESTHER : Sato_2005_Appl.Environ.Microbiol_71_4372 |
| PubMedSearch : Sato_2005_Appl.Environ.Microbiol_71_4372 |
| PubMedID: 16085827 |
| Title : Identification and characterization of genes involved in the downstream degradation pathway of gamma-hexachlorocyclohexane in Sphingomonas paucimobilis UT26 - Endo_2005_J.Bacteriol_187_847 |
| Author(s) : Endo R , Kamakura M , Miyauchi K , Fukuda M , Ohtsubo Y , Tsuda M , Nagata Y |
| Ref : Journal of Bacteriology , 187 :847 , 2005 |
| Abstract : Endo_2005_J.Bacteriol_187_847 |
| ESTHER : Endo_2005_J.Bacteriol_187_847 |
| PubMedSearch : Endo_2005_J.Bacteriol_187_847 |
| PubMedID: 15659662 |
| Gene_locus related to this paper: psepa-q6vqy9 |
| Title : Degradation of beta-Hexachlorocyclohexane by Haloalkane Dehalogenase LinB from Sphingomonas paucimobilis UT26 - Nagata_2005_Appl.Environ.Microbiol_71_2183 |
| Author(s) : Nagata Y , Prokop Z , Sato Y , Jerabek P , Kumar A , Ohtsubo Y , Tsuda M , Damborsky J |
| Ref : Applied Environmental Microbiology , 71 :2183 , 2005 |
| Abstract : Nagata_2005_Appl.Environ.Microbiol_71_2183 |
| ESTHER : Nagata_2005_Appl.Environ.Microbiol_71_2183 |
| PubMedSearch : Nagata_2005_Appl.Environ.Microbiol_71_2183 |
| PubMedID: 15812056 |
| Title : Recipient range of IncP-7 conjugative plasmid pCAR2 from Pseudomonas putida HS01 is broader than from other Pseudomonas strains - Shintani_2005_Biotechnol.Lett_27_1847 |
| Author(s) : Shintani M , Habe H , Tsuda M , Omori T , Yamane H , Nojiri H |
| Ref : Biotechnol Lett , 27 :1847 , 2005 |
| Abstract : Shintani_2005_Biotechnol.Lett_27_1847 |
| ESTHER : Shintani_2005_Biotechnol.Lett_27_1847 |
| PubMedSearch : Shintani_2005_Biotechnol.Lett_27_1847 |
| PubMedID: 16328978 |
| Gene_locus related to this paper: psest-bpdF |
| Title : Modification of activity and specificity of haloalkane dehalogenase from Sphingomonas paucimobilis UT26 by engineering of its entrance tunnel - Chaloupkova_2003_J.Biol.Chem_278_52622 |
| Author(s) : Chaloupkova R , Sykorova J , Prokop Z , Jesenska A , Monincova M , Pavlova M , Tsuda M , Nagata Y , Damborsky J |
| Ref : Journal of Biological Chemistry , 278 :52622 , 2003 |
| Abstract : Chaloupkova_2003_J.Biol.Chem_278_52622 |
| ESTHER : Chaloupkova_2003_J.Biol.Chem_278_52622 |
| PubMedSearch : Chaloupkova_2003_J.Biol.Chem_278_52622 |
| PubMedID: 14525993 |
| Title : Structure of haloacetate-catabolic IncP-1beta plasmid pUO1 and genetic mobility of its residing haloacetate-catabolic transposon - Sota_2003_J.Bacteriol_185_6741 |
| Author(s) : Sota M , Kawasaki H , Tsuda M |
| Ref : Journal of Bacteriology , 185 :6741 , 2003 |
| Abstract : Sota_2003_J.Bacteriol_185_6741 |
| ESTHER : Sota_2003_J.Bacteriol_185_6741 |
| PubMedSearch : Sota_2003_J.Bacteriol_185_6741 |
| PubMedID: 14594853 |
| Gene_locus related to this paper: morsp-deh1 |
| Title : Reconstruction of mycobacterial dehalogenase Rv2579 by cumulative mutagenesis of haloalkane dehalogenase LinB - Nagata_2003_Appl.Environ.Microbiol_69_2349 |
| Author(s) : Nagata Y , Prokop Z , Marvanova S , Sykorova J , Monincova M , Tsuda M , Damborsky J |
| Ref : Applied Environmental Microbiology , 69 :2349 , 2003 |
| Abstract : Nagata_2003_Appl.Environ.Microbiol_69_2349 |
| ESTHER : Nagata_2003_Appl.Environ.Microbiol_69_2349 |
| PubMedSearch : Nagata_2003_Appl.Environ.Microbiol_69_2349 |
| PubMedID: 12676719 |
| Title : Characterization of a class II defective transposon carrying two haloacetate dehalogenase genes from Delftia acidovorans plasmid pUO1 - Sota_2002_Appl.Environ.Microbiol_68_2307 |
| Author(s) : Sota M , Endo M , Nitta K , Kawasaki H , Tsuda M |
| Ref : Applied Environmental Microbiology , 68 :2307 , 2002 |
| Abstract : Sota_2002_Appl.Environ.Microbiol_68_2307 |
| ESTHER : Sota_2002_Appl.Environ.Microbiol_68_2307 |
| PubMedSearch : Sota_2002_Appl.Environ.Microbiol_68_2307 |
| PubMedID: 11976102 |
| Gene_locus related to this paper: morsp-deh1 |
| Title : A phylogenomic study of the OCTase genes in Pseudomonas syringae pathovars: the horizontal transfer of the argK-tox cluster and the evolutionary history of OCTase genes on their genomes - Sawada_2002_J.Mol.Evol_54_437 |
| Author(s) : Sawada H , Kanaya S , Tsuda M , Suzuki F , Azegami K , Saitou N |
| Ref : Journal of Molecular Evolution , 54 :437 , 2002 |
| Abstract : Sawada_2002_J.Mol.Evol_54_437 |
| ESTHER : Sawada_2002_J.Mol.Evol_54_437 |
| PubMedSearch : Sawada_2002_J.Mol.Evol_54_437 |
| PubMedID: 11956683 |
| Gene_locus related to this paper: psesy-PSPTO4540 |
| Title : Halide-stabilizing residues of haloalkane dehalogenases studied by quantum mechanic calculations and site-directed mutagenesis - Bohac_2002_Biochemistry_41_14272 |
| Author(s) : Bohac M , Nagata Y , Prokop Z , Prokop M , Monincova M , Tsuda M , Koca J , Damborsky J |
| Ref : Biochemistry , 41 :14272 , 2002 |
| Abstract : Bohac_2002_Biochemistry_41_14272 |
| ESTHER : Bohac_2002_Biochemistry_41_14272 |
| PubMedSearch : Bohac_2002_Biochemistry_41_14272 |
| PubMedID: 12450392 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Naphthalene degrading genes on plasmid NAH7 are on a defective transposon - Tsuda_1990_Mol.Gen.Genet_223_33 |
| Author(s) : Tsuda M , Iino T |
| Ref : Molecular & General Genetics , 223 :33 , 1990 |
| Abstract : Tsuda_1990_Mol.Gen.Genet_223_33 |
| ESTHER : Tsuda_1990_Mol.Gen.Genet_223_33 |
| PubMedSearch : Tsuda_1990_Mol.Gen.Genet_223_33 |
| PubMedID: 2175388 |
| Gene_locus related to this paper: psepu-q1xgk7 |