Lu M, Schneider D, Daniel R (2022) <br />Metagenomic Screening for Lipolytic Genes Reveals an Ecology-Clustered Distribution Pattern<br /><i>Front Microbiol</i> <b>13</b>: 851969<br /><br />Lu M, Daniel R (2021) <br />A Novel Carboxylesterase Derived from a Compost Metagenome Exhibiting High Stability and Activity towards High Salinity<br /><i>Genes (Basel)</i> <b>12</b>: <br /><br />Castillo Villamizar GA, Nacke H, Boehning M, Herz K, Daniel R (2019) <br />Functional Metagenomics Reveals an Overlooked Diversity and Novel Features of Soil-Derived Bacterial Phosphatases and Phytases<br /><i>MBio</i> <b>10</b>: <br /><br />Lu M, Dukunde A, Daniel R (2019) <br />Biochemical profiles of two thermostable and organic solvent-tolerant esterases derived from a compost metagenome<br /><i>Applied Microbiology & Biotechnology</i> <b>103</b>: 3421<br /><br />Dukunde A, Schneider D, Lu M, Brady S, Daniel R (2017) <br />A novel, versatile family IV carboxylesterase exhibits high stability and activity in a broad pH spectrum<br /><i>Biotechnol Lett</i> <b>39</b>: 577<br /><br />Poehlein A, Daniel R, Thurmer A, Bollinger A, Thies S, Katzke N, Jaeger KE (2017) <br />First Insights into the Genome Sequence of Pseudomonas oleovorans DSM 1045<br /><i>Genome Announc</i> <b>5</b>: <br /><br />Haack FS, Poehlein A, Kroger C, Voigt CA, Piepenbring M, Bode HB, Daniel R, Schafer W, Streit WR (2016) <br />Molecular Keys to the Janthinobacterium and Duganella spp. Interaction with the Plant Pathogen Fusarium graminearum<br /><i>Front Microbiol</i> <b>7</b>: 1668<br /><br />Voget S, Wemheuer B, Brinkhoff T, Vollmers J, Dietrich S, Giebel HA, Beardsley C, Sardemann C, Bakenhus I, Billerbeck S, Daniel R, Simon M (2015) <br />Adaptation of an abundant Roseobacter RCA organism to pelagic systems revealed by genomic and transcriptomic analyses<br /><i>Isme J</i> <b>9</b>: 371<br /><br />Voget S, Billerbeck S, Simon M, Daniel R (2015) <br />Closed Genome Sequence of Octadecabacter temperatus SB1, the First Mesophilic Species of the Genus Octadecabacter<br /><i>Genome Announc</i> <b>3</b>: <br /><br />Djukic M, Brzuszkiewicz E, Funfhaus A, Voss J, Gollnow K, Poppinga L, Liesegang H, Garcia-Gonzalez E, Genersch E, Daniel R (2014) <br />How to kill the honey bee larva: genomic potential and virulence mechanisms of Paenibacillus larvae<br /><i>PLoS ONE</i> <b>9</b>: e90914<br /><br />Luo Q, Hiessl S, Poehlein A, Daniel R, Steinbuchel A (2014) <br />Insights into the microbial degradation of rubber and gutta-percha by analysis of the complete genome of Nocardia nova SH22a<br /><i>Applied Environmental Microbiology</i> <b>80</b>: 3895<br /><br />Poehlein A, Freese HM, Daniel R, Simeonova DD (2014) <br />Draft Genome Sequence of Serratia sp. Strain DD3, Isolated from the Guts of Daphnia magna<br /><i>Genome Announc</i> <b>2</b>: <br /><br />Wubbeler JH, Hiessl S, Schuldes J, Thurmer A, Daniel R, Steinbuchel A (2014) <br />Unravelling the complete genome sequence of Advenella mimigardefordensis strain DPN7T and novel insights in the catabolism of the xenobiotic polythioester precursor 3,3'-dithiodipropionate<br /><i>Microbiology</i> <b>160</b>: 1401<br /><br />Berlemont R, Spee O, Delsaute M, Lara Y, Schuldes J, Simon C, Power P, Daniel R, Galleni M (2013) <br />Novel organic solvent-tolerant esterase isolated by metagenomics: insights into the lipase/esterase classification<br /><i>Rev Argent Microbiol</i> <b>45</b>: 3<br /><br />Brzuszkiewicz E, Schulz T, Rydzewski K, Daniel R, Gillmaier N, Dittmann C, Holland G, Schunder E, Lautner M, Eisenreich W, Luck C, Heuner K (2013) <br />Legionella oakridgensis ATCC 33761 genome sequence and phenotypic characterization reveals its replication capacity in amoebae<br /><i>Int J Med Microbiol</i> <b>303</b>: 514<br /><br />Fraunholz M, Bernhardt J, Schuldes J, Daniel R, Hecker M, Sinha B (2013) <br />Complete Genome Sequence of Staphylococcus aureus 6850, a Highly Cytotoxic and Clinically Virulent Methicillin-Sensitive Strain with Distant Relatedness to Prototype Strains<br /><i>Genome Announc</i> <b>1</b>: e00775<br /><br />Hornung C, Poehlein A, Haack FS, Schmidt M, Dierking K, Pohlen A, Schulenburg H, Blokesch M, Plener L, Jung K, Bonge A, Krohn-Molt I, Utpatel C, Timmermann G, Spieck E, Pommerening-Roser A, Bode E, Bode HB, Daniel R, Schmeisser C, Streit WR (2013) <br />The Janthinobacterium sp. HH01 genome encodes a homologue of the V. cholerae CqsA and L. pneumophila LqsA autoinducer synthases<br /><i>PLoS ONE</i> <b>8</b>: e55045<br /><br />Kabisch J, Thurmer A, Hubel T, Popper L, Daniel R, Schweder T (2013) <br />Characterization and optimization of Bacillus subtilis ATCC 6051 as an expression host<br /><i>J Biotechnol</i> <b>163</b>: 97<br /><br />Poehlein A, Zverlov VV, Daniel R, Schwarz WH, Liebl W (2013) <br />Complete Genome Sequence of Clostridium stercorarium subsp. stercorarium Strain DSM 8532, a Thermophilic Degrader of Plant Cell Wall Fibers<br /><i>Genome Announc</i> <b>1</b>: e0007313<br /><br />Poehlein A, Deutzmann JS, Daniel R, Simeonova DD (2013) <br />Draft Genome Sequence of the Methanotrophic Gammaproteobacterium Methyloglobulus morosus DSM 22980 Strain KoM1<br /><i>Genome Announc</i> <b>1</b>: <br /><br />Poehlein A, Daniel R, Simeonova DD (2013) <br />Draft Genome Sequence of Desulfotignum phosphitoxidans DSM 13687 Strain FiPS-3<br /><i>Genome Announc</i> <b>1</b>: <br /><br />Poehlein A, Gottschalk G, Daniel R (2013) <br />First Insights into the Genome of the Gram-Negative, Endospore-Forming Organism Sporomusa ovata Strain H1 DSM 2662<br /><i>Genome Announc</i> <b>1</b>: <br /><br />Rachinger M, Volland S, Meinhardt F, Daniel R, Liesegang H (2013) <br />First Insights into the Completely Annotated Genome Sequence of Bacillus licheniformis Strain 9945A<br /><i>Genome Announc</i> <b>1</b>: <br /><br />Vollmers J, Voget S, Dietrich S, Gollnow K, Smits M, Meyer K, Brinkhoff T, Simon M, Daniel R (2013) <br />Poles apart: Arctic and Antarctic Octadecabacter strains share high genome plasticity and a new type of xanthorhodopsin<br /><i>PLoS ONE</i> <b>8</b>: e63422<br /><br />Wiegand S, Rabausch U, Chow J, Daniel R, Streit WR, Liesegang H (2013) <br />Complete Genome Sequence of Geobacillus sp. Strain GHH01, a Thermophilic Lipase-Secreting Bacterium<br /><i>Genome Announc</i> <b>1</b>: e0009213<br /><br />Brzuszkiewicz E, Waschkowitz T, Wiezer A, Daniel R (2012) <br />Complete genome sequence of the B12-producing Shimwellia blattae strain DSM 4481, isolated from a cockroach<br /><i>Journal of Bacteriology</i> <b>194</b>: 4436<br /><br />Djukic M, Becker D, Poehlein A, Voget S, Daniel R (2012) <br />Genome sequence of Paenibacillus alvei DSM 29, a secondary invader during European foulbrood outbreaks<br /><i>Journal of Bacteriology</i> <b>194</b>: 6365<br /><br />Gardebrecht A, Markert S, Sievert SM, Felbeck H, Thurmer A, Albrecht D, Wollherr A, Kabisch J, Le Bris N, Lehmann R, Daniel R, Liesegang H, Hecker M, Schweder T (2012) <br />Physiological homogeneity among the endosymbionts of Riftia pachyptila and Tevnia jerichonana revealed by proteogenomics<br /><i>Isme J</i> <b>6</b>: 766<br /><br />Hiessl S, Schuldes J, Thurmer A, Halbsguth T, Broker D, Angelov A, Liebl W, Daniel R, Steinbuchel A (2012) <br />Involvement of two latex-clearing proteins during rubber degradation and insights into the subsequent degradation pathway revealed by the genome sequence of Gordonia polyisoprenivorans strain VH2<br /><i>Applied Environmental Microbiology</i> <b>78</b>: 2874<br /><br />Michael GB, Kadlec K, Sweeney MT, Brzuszkiewicz E, Liesegang H, Daniel R, Murray RW, Watts JL, Schwarz S (2012) <br />ICEPmu1, an integrative conjugative element (ICE) of Pasteurella multocida: structure and transfer<br /><i>J Antimicrob Chemother</i> <b>67</b>: 91<br /><br />Niewerth H, Schuldes J, Parschat K, Kiefer P, Vorholt JA, Daniel R, Fetzner S (2012) <br />Complete genome sequence and metabolic potential of the quinaldine-degrading bacterium Arthrobacter sp. Rue61a<br /><i>BMC Genomics</i> <b>13</b>: 534<br /><br />Schuldes J, Rodriguez Orbegoso M, Schmeisser C, Krishnan HB, Daniel R, Streit WR (2012) <br />Complete genome sequence of the broad-host-range strain Sinorhizobium fredii USDA257<br /><i>Journal of Bacteriology</i> <b>194</b>: 4483<br /><br />Spang A, Poehlein A, Offre P, Zumbragel S, Haider S, Rychlik N, Nowka B, Schmeisser C, Lebedeva EV, Rattei T, Bohm C, Schmid M, Galushko A, Hatzenpichler R, Weinmaier T, Daniel R, Schleper C, Spieck E, Streit WR, Wagner M (2012) <br />The genome of the ammonia-oxidizing Candidatus Nitrososphaera gargensis: insights into metabolic versatility and environmental adaptations<br /><i>Environ Microbiol</i> <b>14</b>: 3122<br /><br />Thole S, Kalhoefer D, Voget S, Berger M, Engelhardt T, Liesegang H, Wollherr A, Kjelleberg S, Daniel R, Simon M, Thomas T, Brinkhoff T (2012) <br />Phaeobacter gallaeciensis genomes from globally opposite locations reveal high similarity of adaptation to surface life<br /><i>Isme J</i> <b>6</b>: 2229<br /><br />Brzuszkiewicz E, Weiner J, Wollherr A, Thurmer A, Hupeden J, Lomholt HB, Kilian M, Gottschalk G, Daniel R, Mollenkopf HJ, Meyer TF, Bruggemann H (2011) <br />Comparative genomics and transcriptomics of Propionibacterium acnes<br /><i>PLoS ONE</i> <b>6</b>: e21581<br /><br />Djukic M, Poehlein A, Thurmer A, Daniel R (2011) <br />Genome sequence of Brevibacillus laterosporus LMG 15441, a pathogen of invertebrates<br /><i>Journal of Bacteriology</i> <b>193</b>: 5535<br /><br />Kalhoefer D, Thole S, Voget S, Lehmann R, Liesegang H, Wollher A, Daniel R, Simon M, Brinkhoff T (2011) <br />Comparative genome analysis and genome-guided physiological analysis of Roseobacter litoralis<br /><i>BMC Genomics</i> <b>12</b>: 324<br /><br />Nacke H, Will C, Herzog S, Nowka B, Engelhaupt M, Daniel R (2011) <br />Identification of novel lipolytic genes and gene families by screening of metagenomic libraries derived from soil samples of the German Biodiversity Exploratories<br /><i>FEMS Microbiol Ecol</i> <b>78</b>: 188<br /><br />Poehlein A, Kusian B, Friedrich B, Daniel R, Bowien B (2011) <br />Complete genome sequence of the type strain Cupriavidus necator N-1<br /><i>Journal of Bacteriology</i> <b>193</b>: 5017<br /><br />Rechnitzer H, Brzuszkiewicz E, Strittmatter A, Liesegang H, Lysnyansky I, Daniel R, Gottschalk G, Rottem S (2011) <br />Genomic features and insights into the biology of Mycoplasma fermentans<br /><i>Microbiology</i> <b>157</b>: 760<br /><br />Volland S, Rachinger M, Strittmatter A, Daniel R, Gottschalk G, Meyer O (2011) <br />Complete genome sequences of the chemolithoautotrophic Oligotropha carboxidovorans strains OM4 and OM5<br /><i>Journal of Bacteriology</i> <b>193</b>: 5043<br /><br />Angelov A, Liebl S, Ballschmiter M, Bomeke M, Lehmann R, Liesegang H, Daniel R, Liebl W (2010) <br />Genome sequence of the polysaccharide-degrading, thermophilic anaerobe Spirochaeta thermophila DSM 6192<br /><i>Journal of Bacteriology</i> <b>192</b>: 6492<br /><br />Farnbacher M, Jahns T, Willrodt D, Daniel R, Haas R, Goesmann A, Kurtz S, Rieder G (2010) <br />Sequencing, annotation, and comparative genome analysis of the gerbil-adapted Helicobacter pylori strain B8<br /><i>BMC Genomics</i> <b>11</b>: 335<br /><br />Wagner-Dobler I, Ballhausen B, Berger M, Brinkhoff T, Buchholz I, Bunk B, Cypionka H, Daniel R, Drepper T, Gerdts G, Hahnke S, Han C, Jahn D, Kalhoefer D, Kiss H, Klenk HP, Kyrpides N, Liebl W, Liesegang H, Meincke L, Pati A, Petersen J, Piekarski T, Pommerenke C, Pradella S, Pukall R, Rabus R, Stackebrandt E, Thole S, Thompson L, Tielen P, Tomasch J, von Jan M, Wanphrut N, Wichels A, Zech H, Simon M (2010) <br />The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea<br /><i>Isme J</i> <b>4</b>: 61<br /><br />Zdziarski J, Brzuszkiewicz E, Wullt B, Liesegang H, Biran D, Voigt B, Gronberg-Hernandez J, Ragnarsdottir B, Hecker M, Ron EZ, Daniel R, Gottschalk G, Hacker J, Svanborg C, Dobrindt U (2010) <br />Host imprints on bacterial genomes--rapid, divergent evolution in individual patients<br /><i>PLoS Pathog</i> <b>6</b>: e1001078<br /><br />Streit WR, Daniel R, Jaeger KE (2004) <br />Prospecting for biocatalysts and drugs in the genomes of non-cultured microorganisms<br /><i>Curr Opin Biotechnol</i> <b>15</b>: 285<br /><br />Knietsch A, Waschkowitz T, Bowien S, Henne A, Daniel R (2003) <br />Construction and screening of metagenomic libraries derived from enrichment cultures: generation of a gene bank for genes conferring alcohol oxidoreductase activity on Escherichia coli<br /><i>Applied Environmental Microbiology</i> <b>69</b>: 1408<br /><br />Knietsch A, Waschkowitz T, Bowien S, Henne A, Daniel R (2003) <br />Metagenomes of complex microbial consortia derived from different soils as sources for novel genes conferring formation of carbonyls from short-chain polyols on Escherichia coli<br /><i>J Molecular Microbiology Biotechnol</i> <b>5</b>: 46<br /><br />Henne A, Schmitz RA, Bomeke M, Gottschalk G, Daniel R (2000) <br />Screening of environmental DNA libraries for the presence of genes conferring lipolytic activity on Escherichia coli<br /><i>Applied Environmental Microbiology</i> <b>66</b>: 3113<br /><br />