Buchholz PCF, Feuerriegel G, Zhang H, Perez-Garcia P, Nover LL, Chow J, Streit WR, Pleiss J (2022) <br />Plastics degradation by hydrolytic enzymes: The plastics-active enzymes database-PAZy<br /><i>Proteins</i> <b>90</b>: 1443<br /><br />Zhang H, Perez-Garcia P, Dierkes RF, Applegate V, Schumacher J, Chibani CM, Sternagel S, Preuss L, Weigert S, Schmeisser C, Danso D, Pleiss J, Almeida A, Hocker B, Hallam SJ, Schmitz RA, Smits SHJ, Chow J, Streit WR (2021) <br />The Bacteroidetes Aequorivita sp. and Kaistella jeonii Produce Promiscuous Esterases With PET-Hydrolyzing Activity<br /><i>Front Microbiol</i> <b>12</b>: 803896<br /><br />Buchholz PCF, Zhang H, Perez-Garcia P, Nover LL, Chow J, Streit WR, Pleiss J (2021) <br />Plastics degradation by hydrolytic enzymes: the Plastics-Active Enzymes Database - PAZy<br /><i>Authorea</i> <br /><br />Carvalho HF, Ferrario V, Pleiss J (2021) <br />Molecular Mechanism of Methanol Inhibition in CALB-Catalyzed Alcoholysis: Analyzing Molecular Dynamics Simulations by a Markov State Model<br /><i>J Chem Theory Comput</i> <br /><br />Pleiss J (2021) <br />Standardized Data, Scalable Documentation, Sustainable Storage - EnzymeML As A Basis For FAIR Data Management In Biocatalysis<br /><i>ChemCatChem</i> <b>13</b>: 3909<br /><br />Zhang H, Dierkes R, Perez-Garcia P, Weigert S, Sternagel S, Hallam S, Schott T, Juergens K, Vollstedt C, Chibani C, Danso D, Buchholz PCF, Pleiss J, Almeida A, Hocker B, Schmitz R, Chow J, Streit WR (2021) <br />The abundance of mRNA transcripts of bacteroidetal polyethylene terephthalate (PET) esterase genes may indicate a role in marine plastic degradation<br /><i>ResearchSquare</i> <br /><br />Bauer TL, Buchholz PCF, Pleiss J (2020) <br />The modular structure of alpha/beta-hydrolases<br /><i>Febs J</i> <b>287</b>: 1035<br /><br />Mangiagalli M, Carvalho H, Natalello A, Ferrario V, Pennati ML, Barbiroli A, Lotti M, Pleiss J, Brocca S (2020) <br />Diverse effects of aqueous polar co-solvents on Candida antarctica lipase B<br /><i>Int J Biol Macromol</i> <b>150</b>: 930<br /><br />Martinez-Martinez M, Coscolin C, Santiago G, Chow J, Stogios PJ, Bargiela R, Gertler C, Navarro-Fernandez J, Bollinger A, Thies S, Mendez-Garcia C, Popovic A, Brown G, Chernikova TN, Garcia-Moyano A, Bjergah GE, Perez-Garcia P, Hai T, Del Pozo MV, Stokke R, Steen IH, Cui H, Xu X, Nocek BP, Alcaide M, Distaso M, Mesa V, Pelaez AI, Sanchez J, Buchholz PCF, Pleiss J, Fernandez-Guerra A, Glockner FO, Golyshina OV, Yakimov MM, Savchenko A, Jaeger KE, Yakunin AF, Streit WR, Golyshin PN, Guallar V, Ferrer M (2018) <br />Determinants and prediction of esterase substrate promiscuity patterns<br /><i>ACS Chemical Biology</i> <b>13</b>: 225<br /><br />Benson SP, Pleiss J (2017) <br />Self-Assembly Nanostructures of Triglyceride-Water Interfaces Determine Functional Conformations of Candida antarctica Lipase B<br /><i>Langmuir</i> <b>33</b>: 3151<br /><br />Buchholz PCF, Vogel C, Reusch W, Pohl M, Rother D, Spiess AC, Pleiss J (2016) <br />BioCatNet: A Database System for the Integration of Enzyme Sequences and Biocatalytic Experiments<br /><i>Chembiochem</i> <b>17</b>: 2093<br /><br />Kulschewski T, Pleiss J (2016) <br />Binding of Solvent Molecules to a Protein Surface in Binary Mixtures Follows a Competitive Langmuir Model<br /><i>Langmuir</i> <b>32</b>: 8960<br /><br />Lotti Marina, Pleiss J, Valero F, Ferrer P (2015) <br />Effects of methanol on lipases: molecular, kinetic and process issues in the production of biodiesel<br /><i>Biotechnol J</i> <b>10</b>: 22<br /><br />Sasso F, Kulschewski T, Secundo F, Lotti Marina, Pleiss J (2015) <br />The effect of thermodynamic properties of solvent mixtures explains the difference between methanol and ethanol in C.antarctica lipase B catalyzed alcoholysis<br /><i>J Biotechnol</i> <b>214</b>: 1<br /><br />Benson SP, Pleiss J (2014) <br />Solvent Flux Method (SFM): A Case Study of Water Access to Candida antarctica Lipase B<br /><i>J Chem Theory Comput</i> <b>10</b>: 5206<br /><br />Kulschewski T, Sasso F, Secundo F, Lotti Marina, Pleiss J (2013) <br />Molecular mechanism of deactivation of C. antarctica lipase B by methanol<br /><i>J Biotechnol</i> <b>168</b>: 462<br /><br />Gruber CC, Pleiss J (2012) <br />Molecular modeling of lipase binding to a substrate-water interface<br /><i>Methods Mol Biol</i> <b>861</b>: 313<br /><br />Gatti-Lafranconi P, Natalello A, Rehm S, Doglia SM, Pleiss J, Lotti M (2010) <br />Evolution of stability in a cold-active enzyme elicits specificity relaxation and highlights substrate-related effects on temperature adaptation<br /><i>Journal of Molecular Biology</i> <b>395</b>: 155<br /><br />Juhl PB, Doderer K, Hollmann F, Thum O, Pleiss J (2010) <br />Engineering of Candida antarctica lipase B for hydrolysis of bulky carboxylic acid esters<br /><i>J Biotechnol</i> <b>150</b>: 474<br /><br />Liu D, Trodler P, Eiben S, Koschorreck K, Muller M, Pleiss J, Maurer SC, Branneby C, Schmid RD, Hauer B (2010) <br />Rational design of Pseudozyma antarctica lipase B yielding a general esterification catalyst<br /><i>Chembiochem</i> <b>11</b>: 789<br /><br />Rehm S, Trodler P, Pleiss J (2010) <br />Solvent-induced lid opening in lipases: a molecular dynamics study<br /><i>Protein Science</i> <b>19</b>: 2122<br /><br />Widmann M, Juhl PB, Pleiss J (2010) <br />Structural classification by the Lipase Engineering Database: a case study of Candida antarctica lipase A<br /><i>BMC Genomics</i> <b>11</b>: 123<br /><br />Branco RJ, Graber M, Denis V, Pleiss J (2009) <br />Molecular mechanism of the hydration of Candida antarctica lipase B in the gas phase: Water adsorption isotherms and molecular dynamics simulations<br /><i>Chembiochem</i> <b>10</b>: 2913<br /><br />Chen B, Cai Z, Wu W, Huang Y, Pleiss J, Lin Z (2009) <br />Morphing activity between structurally similar enzymes: from heme-free bromoperoxidase to lipase<br /><i>Biochemistry</i> <b>48</b>: 11496<br /><br />Juhl PB, Trodler P, Tyagi S, Pleiss J (2009) <br />Modelling substrate specificity and enantioselectivity for lipases and esterases by substrate-imprinted docking<br /><i>BMC Struct Biol</i> <b>9</b>: 39<br /><br />Knoll M, Hamm TM, Wagner F, Martinez V, Pleiss J (2009) <br />The PHA Depolymerase Engineering Database: A systematic analysis tool for the diverse family of polyhydroxyalkanoate (PHA) depolymerases<br /><i>BMC Bioinformatics</i> <b>10</b>: 89<br /><br />Trodler P, Schmid RD, Pleiss J (2009) <br />Modeling of solvent-dependent conformational transitions in Burkholderia cepacia lipase<br /><i>BMC Struct Biol</i> <b>9</b>: 38<br /><br />Trodler P, Nieveler J, Rusnak M, Schmid RD, Pleiss J (2008) <br />Rational design of a new one-step purification strategy for Candida antarctica lipase B by ion-exchange chromatography<br /><i>Journal of Chromatography A</i> <b>1179</b>: 161<br /><br />Trodler P, Pleiss J (2008) <br />Modeling structure and flexibility of Candida antarctica lipase B in organic solvents<br /><i>BMC Struct Biol</i> <b>8</b>: 9<br /><br />Widmann M, Clairo M, Dippon J, Pleiss J (2008) <br />Analysis of the distribution of functionally relevant rare codons<br /><i>BMC Genomics</i> <b>9</b>: 207<br /><br />Fischer M, Thai QK, Grieb M, Pleiss J (2006) <br />DWARF--a data warehouse system for analyzing protein families<br /><i>BMC Bioinformatics</i> <b>7</b>: 495<br /><br />Tyagi S, Pleiss J (2006) <br />Biochemical profiling in silico--predicting substrate specificities of large enzyme families<br /><i>J Biotechnol</i> <b>124</b>: 108<br /><br />Barth S, Fischer M, Schmid RD, Pleiss J (2004) <br />The database of epoxide hydrolases and haloalkane dehalogenases: one structure, many functions<br /><i>Bioinformatics</i> <b>20</b>: 2845<br /><br />Barth S, Fischer M, Schmid RD, Pleiss J (2004) <br />Sequence and structure of epoxide hydrolases: a systematic analysis<br /><i>Proteins</i> <b>55</b>: 846<br /><br />Tejo BA, Salleh AB, Pleiss J (2004) <br />Structure and dynamics of Candida rugosa lipase: the role of organic solvent<br /><i>J Mol Model</i> <b>10</b>: 358<br /><br />Henke E, Bornscheuer UT, Schmid RD, Pleiss J (2003) <br />A molecular mechanism of enantiorecognition of tertiary alcohols by carboxylesterases<br /><i>Chembiochem</i> <b>4</b>: 485<br /><br />Henke E, Pleiss J, Bornscheuer UT (2002) <br />Activity of lipases and esterases towards tertiary alcohols: insights into structure-function relationships<br /><i>Angew Chem Int Ed Engl</i> <b>41</b>: 3211<br /><br />Schmitt J, Brocca S, Schmid RD, Pleiss J (2002) <br />Blocking the tunnel: engineering of Candida rugosa lipase mutants with short chain length specificity<br /><i>Protein Engineering</i> <b>15</b>: 595<br /><br />Pleiss J, Mionetto N, Schmid RD (1999) <br />Probing the acyl binding site of acetylcholinesterase by protein engineering<br /><i>J Mol Catal B Enzym</i> <b>6</b>: 287<br /><br />Pleiss J, Fischer M, Schmid RD (1998) <br />Anatomy of lipase binding sites: the scissile fatty acid binding site<br /><i>Chemistry & Physic of Lipids</i> <b>93</b>: 67<br /><br />