Hemmerich J, Labib M, Steffens C, Reich SJ, Weiske M, Baumgart M, Ruckert C, Ruwe M, Siebert D, Wendisch VF, Kalinowski J, Wiechert W, Oldiges M (2020)
Screening of a genome-reduced Corynebacterium glutamicum strain library for improved heterologous cutinase secretion
Microb Biotechnol 13: 2020
Kibret M, Guerrero-Garzon JF, Urban E, Zehl M, Wronski VK, Ruckert C, Busche T, Kalinowski J, Rollinger JM, Abate D, Zotchev SB (2018)
Streptomyces spp. From Ethiopia Producing Antimicrobial Compounds: Characterization via Bioassays, Genome Analyses, and Mass Spectrometry
Front Microbiol 9: 1270
Irla M, Neshat A, Brautaset T, Ruckert C, Kalinowski J, Wendisch VF (2015)
Transcriptome analysis of thermophilic methylotrophic Bacillus methanolicus MGA3 using RNA-sequencing provides detailed insights into its previously uncharted transcriptional landscape
BMC Genomics 16: 73
Merten M, Brinkrolf K, Albersmeier A, Kutter Y, Ruckert C, Tauch A (2015)
Complete Genome Sequence and Annotation of Corynebacterium singulare DSM 44357, Isolated from a Human Semen Specimen
Genome Announc 3:
Muller C, Birmes FS, Ruckert C, Kalinowski J, Fetzner S (2015)
Rhodococcus erythropolis BG43 Genes Mediating Pseudomonas aeruginosa Quinolone Signal Degradation and Virulence Factor Attenuation
Applied Environmental Microbiology 81: 7720
Oelschlagel M, Ruckert C, Kalinowski J, Schmidt G, Schlomann M, Tischler D (2015)
Sphingopyxis fribergensis sp. nov., a soil bacterium with the ability to degrade styrene and phenylacetic acid
Int J Syst Evol Microbiol 65: 3008
Ortseifen V, Winkler A, Albersmeier A, Wendler S, Puhler A, Kalinowski J, Ruckert C (2015)
Complete genome sequence of the actinobacterium Streptomyces glaucescens GLA.O (DSM 40922) consisting of a linear chromosome and one linear plasmid
J Biotechnol 194: 81
Ruckert C, Albersmeier A, Winkler A, Tauch A (2015)
Complete Genome Sequence of Corynebacterium camporealensis DSM 44610, Isolated from the Milk of a Manchega Sheep with Subclinical Mastitis
Genome Announc 3:
Ruckert C, Albersmeier A, Winkler A, Tauch A (2015)
Complete Genome Sequence of Corynebacterium kutscheri DSM 20755, a Corynebacterial Type Strain with Remarkably Low G+C Content of Chromosomal DNA
Genome Announc 3:
Ruckert C, Kriete M, Jaenicke S, Winkler A, Tauch A (2015)
Virulence Factor Genes Detected in the Complete Genome Sequence of Corynebacterium uterequi DSM 45634, Isolated from the Uterus of a Maiden Mare
Genome Announc 3:
Ruckert C, Birmes FS, Muller C, Niewerth H, Winkler A, Fetzner S, Kalinowski J (2015)
Complete genome sequence of Rhodococcus erythropolis BG43 (DSM 46869), a degrader of Pseudomonas aeruginosa quorum sensing signal molecules
J Biotechnol 211: 99
Flinspach K, Ruckert C, Kalinowski J, Heide L, Apel AK (2014)
Draft Genome Sequence of Streptomyces niveus NCIMB 11891, Producer of the Aminocoumarin Antibiotic Novobiocin
Genome Announc 2:
Glaub A, Bomholt C, Gravermann K, Brinkrolf K, Albersmeier A, Ruckert C, Tauch A (2014)
Complete Genome Sequence of Corynebacterium falsenii DSM 44353 To Study the Evolution of Corynebacterium Cluster 3 Species
Genome Announc 2:
Rebets Y, Tokovenko B, Lushchyk I, Ruckert C, Zaburannyi N, Bechthold A, Kalinowski J, Luzhetskyy A (2014)
Complete genome sequence of producer of the glycopeptide antibiotic Aculeximycin Kutzneria albida DSM 43870T, a representative of minor genus of Pseudonocardiaceae
BMC Genomics 15: 885
Ruckert C, Kalinowski J, Heide L, Apel AK (2014)
Draft Genome Sequence of Streptomyces roseochromogenes subsp. oscitans DS 12.976, Producer of the Aminocoumarin Antibiotic Clorobiocin
Genome Announc 2:
Ruckert C, Szczepanowski R, Albersmeier A, Goesmann A, Fischer N, Steinkamper A, Puhler A, Biener R, Schwartz D, Kalinowski J (2014)
Complete genome sequence of the actinobacterium Actinoplanes friuliensis HAG 010964, producer of the lipopeptide antibiotic friulimycin
J Biotechnol 178: 41
Stegmann E, Albersmeier A, Spohn M, Gert H, Weber T, Wohlleben W, Kalinowski J, Ruckert C (2014)
Complete genome sequence of the actinobacterium Amycolatopsis japonica MG417-CF17(T) (=DSM 44213T) producing (S,S)-N,N'-ethylenediaminedisuccinic acid
J Biotechnol 189: 46
Wilson MC, Mori T, Ruckert C, Uria AR, Helf MJ, Takada K, Gernert C, Steffens UA, Heycke N, Schmitt S, Rinke C, Helfrich EJ, Brachmann AO, Gurgui C, Wakimoto T, Kracht M, Crusemann M, Hentschel U, Abe I, Matsunaga S, Kalinowski J, Takeyama H, Piel J (2014)
An environmental bacterial taxon with a large and distinct metabolic repertoire
Nature 506: 58
Baumgart M, Unthan S, Ruckert C, Sivalingam J, Grunberger A, Kalinowski J, Bott M, Noack S, Frunzke J (2013)
Construction of a prophage-free variant of Corynebacterium glutamicum ATCC 13032 for use as a platform strain for basic research and industrial biotechnology
Applied Environmental Microbiology 79: 6006
Bomholt C, Glaub A, Gravermann K, Albersmeier A, Brinkrolf K, Ruckert C, Tauch A (2013)
Whole-Genome Sequence of the Clinical Strain Corynebacterium argentoratense DSM 44202, Isolated from a Human Throat Specimen
Genome Announc 1:
Roetzer A, Diel R, Kohl TA, Ruckert C, Nubel U, Blom J, Wirth T, Jaenicke S, Schuback S, Rusch-Gerdes S, Supply P, Kalinowski J, Niemann S (2013)
Whole genome sequencing versus traditional genotyping for investigation of a Mycobacterium tuberculosis outbreak: a longitudinal molecular epidemiological study
PLoS Med 10: e1001387
Ruckert C, Szczepanowski R, Albersmeier A, Goesmann A, Iftime D, Musiol EM, Blin K, Wohlleben W, Puhler A, Kalinowski J, Weber T (2013)
Complete genome sequence of the kirromycin producer Streptomyces collinus Tu 365 consisting of a linear chromosome and two linear plasmids
J Biotechnol 168: 739
Antwerpen M, Proenca DN, Ruckert C, Licht K, Kalinowski J, Hanczaruk M, Tiemann C, Grass G (2012)
Draft genome sequence of Bacillus anthracis BF-1, isolated from Bavarian cattle
Journal of Bacteriology 194: 6360
Brinkrolf K, Schneider J, Knecht M, Ruckert C, Tauch A (2012)
Draft genome sequence of Turicella otitidis ATCC 51513, isolated from middle ear fluid from a child with otitis media
Journal of Bacteriology 194: 5968
He P, Hao K, Blom J, Ruckert C, Vater J, Mao Z, Wu Y, Hou M, He Y, Borriss R (2012)
Genome sequence of the plant growth promoting strain Bacillus amyloliquefaciens subsp. plantarum B9601-Y2 and expression of mersacidin and other secondary metabolites
J Biotechnol 164: 281
Jankowitsch F, Schwarz J, Ruckert C, Gust B, Szczepanowski R, Blom J, Pelzer S, Kalinowski J, Mack M (2012)
Genome sequence of the bacterium Streptomyces davawensis JCM 4913 and heterologous production of the unique antibiotic roseoflavin
Journal of Bacteriology 194: 6818
Ruckert C, Albersmeier A, Al-Dilaimi A, Niehaus K, Szczepanowski R, Kalinowski J (2012)
Genome sequence of the halotolerant bacterium Corynebacterium halotolerans type strain YIM 70093(T) (= DSM 44683(T))
Stand Genomic Sci 7: 284
Ruckert C, Licht K, Kalinowski J, Espirito Santo C, Antwerpen M, Hanczaruk M, Reischl U, Holzmann T, Gessner A, Tiemann C, Grass G (2012)
Draft genome sequence of Bacillus anthracis UR-1, isolated from a German heroin user
Journal of Bacteriology 194: 5997
Schneider J, Andrea H, Blom J, Jaenicke S, Ruckert C, Schorsch C, Szczepanowski R, Farwick M, Goesmann A, Puhler A, Schaffer S, Tauch A, Kohler T, Brinkrolf K (2012)
Draft genome sequence of Wickerhamomyces ciferrii NRRL Y-1031 F-60-10
Eukaryot Cell 11: 1582
Strobel T, Al-Dilaimi A, Blom J, Gessner A, Kalinowski J, Luzhetska M, Puhler A, Szczepanowski R, Bechthold A, Ruckert C (2012)
Complete genome sequence of Saccharothrix espanaensis DSM 44229(T) and comparison to the other completely sequenced Pseudonocardiaceae
BMC Genomics 13: 465
Hinse D, Vollmer T, Ruckert C, Blom J, Kalinowski J, Knabbe C, Dreier J (2011)
Complete genome and comparative analysis of Streptococcus gallolyticus subsp. gallolyticus, an emerging pathogen of infective endocarditis
BMC Genomics 12: 400
Ruckert C, Blom J, Chen X, Reva O, Borriss R (2011)
Genome sequence of B. amyloliquefaciens type strain DSM7(T) reveals differences to plant-associated B. amyloliquefaciens FZB42
J Biotechnol 155: 78
Bertelli C, Collyn F, Croxatto A, Ruckert C, Polkinghorne A, Kebbi-Beghdadi C, Goesmann A, Vaughan L, Greub G (2010)
The Waddlia genome: a window into chlamydial biology
PLoS ONE 5: e10890
Gartemann KH, Abt B, Bekel T, Burger A, Engemann J, Flugel M, Gaigalat L, Goesmann A, Grafen I, Kalinowski J, Kaup O, Kirchner O, Krause L, Linke B, McHardy A, Meyer F, Pohle S, Ruckert C, Schneiker S, Zellermann EM, Puhler A, Eichenlaub R, Kaiser O, Bartels D (2008)
The genome sequence of the tomato-pathogenic actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 reveals a large island involved in pathogenicity
Journal of Bacteriology 190: 2138
Gross R, Guzman CA, Sebaihia M, dos Santos VA, Pieper DH, Koebnik R, Lechner M, Bartels D, Buhrmester J, Choudhuri JV, Ebensen T, Gaigalat L, Herrmann S, Khachane AN, Larisch C, Link S, Linke B, Meyer F, Mormann S, Nakunst D, Ruckert C, Schneiker-Bekel S, Schulze K, Vorholter FJ, Yevsa T, Engle JT, Goldman WE, Puhler A, Gobel UB, Goesmann A, Blocker H, Kaiser O, Martinez-Arias R (2008)
The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic Bordetellae
BMC Genomics 9: 449
Vorholter FJ, Schneiker S, Goesmann A, Krause L, Bekel T, Kaiser O, Linke B, Patschkowski T, Ruckert C, Schmid J, Sidhu VK, Sieber V, Tauch A, Watt SA, Weisshaar B, Becker A, Niehaus K, Puhler A (2008)
The genome of Xanthomonas campestris pv. campestris B100 and its use for the reconstruction of metabolic pathways involved in xanthan biosynthesis
J Biotechnol 134: 33
Schneiker S, Perlova O, Kaiser O, Gerth K, Alici A, Altmeyer MO, Bartels D, Bekel T, Beyer S, Bode E, Bode HB, Bolten CJ, Choudhuri JV, Doss S, Elnakady YA, Frank B, Gaigalat L, Goesmann A, Groeger C, Gross F, Jelsbak L, Kalinowski J, Kegler C, Knauber T, Konietzny S, Kopp M, Krause L, Krug D, Linke B, Mahmud T, Martinez-Arias R, McHardy AC, Merai M, Meyer F, Mormann S, Munoz-Dorado J, Perez J, Pradella S, Rachid S, Raddatz G, Rosenau F, Ruckert C, Sasse F, Scharfe M, Schuster SC, Suen G, Treuner-Lange A, Velicer GJ, Vorholter FJ, Weissman KJ, Welch RD, Wenzel SC, Whitworth DE, Wilhelm S, Wittmann C, Blocker H, Puhler A, Muller R (2007)
Complete genome sequence of the myxobacterium Sorangium cellulosum
Nat Biotechnol 25: 1281
de Souza Dahm KC, Ruckert C, Tonial EM, Bonan CD (2006)
In vitro exposure of heavy metals on nucleotidase and cholinesterase activities from the digestive gland of Helix aspersa
Comparative Biochemistry & Physiology C Toxicol Pharmacol 143: 316
Thieme F, Koebnik R, Bekel T, Berger C, Boch J, Buttner D, Caldana C, Gaigalat L, Goesmann A, Kay S, Kirchner O, Lanz C, Linke B, McHardy AC, Meyer F, Mittenhuber G, Nies DH, Niesbach-Klosgen U, Patschkowski T, Ruckert C, Rupp O, Schneiker S, Schuster SC, Vorholter FJ, Weber E, Puhler A, Bonas U, Bartels D, Kaiser O (2005)
Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence
Journal of Bacteriology 187: 7254
Kalinowski J, Bathe B, Bartels D, Bischoff N, Bott M, Burkovski A, Dusch N, Eggeling L, Eikmanns BJ, Gaigalat L, Goesmann A, Hartmann M, Huthmacher K, Kramer R, Linke B, McHardy AC, Meyer F, Mockel B, Pfefferle W, Puhler A, Rey DA, Ruckert C, Rupp O, Sahm H, Wendisch VF, Wiegrabe I, Tauch A (2003)
The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of L-aspartate-derived amino acids and vitamins
J Biotechnol 104: 5