PE-PPE

Relationship

Family: PE-PPE

Block: X

Parent Family: No family

Comment

The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). This domain is found C-terminal to the PE (IPR000084) and PPE (IPR000030) domains. Only a few of these domain are associated with alpha/beta hydrolases. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands, and recently demonstrated to be alpha/beta hydrolase: see Sultana et al. This protein domain is close to cutinase. The membrane-associated acyltransferase Chp1 (myctu-Rv3822) accepts a synthetic diacyl sulfolipid and transfers an acyl group regioselectively from one donor substrate molecule to a second acceptor molecule in two successive reactions to yield a tetraacylated product. The rv1184c locus encodes Chp2, an acyltransferase in polyacyltrehalose lipid biosynthesis. In fact this domain is found in many unrelated folds only a few are alpha/beta hydrolases (Sultana 2016)

Database

Interpro : IPR013228 PE-PPE, C-terminal , IPR000084 PE-PGRS family, N-terminal

PIRSF : No PIRSF

Pdoc : No Pdoc

Pfam : PF08237 PE-PPE

Prints : No Print

EC Number : No EC Number

Sequences

Peptide in Fasta
Nucleotide in Fasta
Alignment with Multalin Text only
Seed alignment with MAFFT No colour
Alignment with MAFFT No colour
Dendrogram The dnd file

References (7)

Title : Mycobacterium tuberculosis PE1 and PE2 proteins carrying conserved alpha\/beta-serine hydrolase domain are esterases hydrolyzing short to medium chain p-nitrophenyl esters - Divya_2018_Prog.Biophys.Mol.Biol_140_90
Author(s) : Divya MB , Vemula M , Balakrishnan K , Banerjee S , Guruprasad L
Ref : Prog Biophys Mol Biol , 140 :90 , 2018
Abstract : Divya_2018_Prog.Biophys.Mol.Biol_140_90
ESTHER : Divya_2018_Prog.Biophys.Mol.Biol_140_90
PubMedSearch : Divya_2018_Prog.Biophys.Mol.Biol_140_90
PubMedID: 29751012
Gene_locus related to this paper: myctu-Rv0151c , myctu-Rv0152c

Title : Prediction of Certain Well-Characterized Domains of Known Functions within the PE and PPE Proteins of Mycobacteria - Sultana_2016_PLoS.One_11_e0146786
Author(s) : Sultana R , Tanneeru K , Kumar AB , Guruprasad L
Ref : PLoS ONE , 11 :e0146786 , 2016
Abstract : Sultana_2016_PLoS.One_11_e0146786
ESTHER : Sultana_2016_PLoS.One_11_e0146786
PubMedSearch : Sultana_2016_PLoS.One_11_e0146786
PubMedID: 26891364

Title : The rv1184c Locus Encodes Chp2, an Acyltransferase in Mycobacterium tuberculosis Polyacyltrehalose Lipid Biosynthesis - Touchette_2015_J.Bacteriol_197_201
Author(s) : Touchette MH , Holsclaw CM , Previti ML , Solomon VC , Leary JA , Bertozzi CR , Seeliger JC
Ref : Journal of Bacteriology , 197 :201 , 2015
Abstract : Touchette_2015_J.Bacteriol_197_201
ESTHER : Touchette_2015_J.Bacteriol_197_201
PubMedSearch : Touchette_2015_J.Bacteriol_197_201
PubMedID: 25331437
Gene_locus related to this paper: myctu-Rv1184c

Title : Elucidation and chemical modulation of sulfolipid-1 biosynthesis in Mycobacterium tuberculosis - Seeliger_2012_J.Biol.Chem_287_7990
Author(s) : Seeliger JC , Holsclaw CM , Schelle MW , Botyanszki Z , Gilmore SA , Tully SE , Niederweis M , Cravatt BF , Leary JA , Bertozzi CR
Ref : Journal of Biological Chemistry , 287 :7990 , 2012
Abstract : Seeliger_2012_J.Biol.Chem_287_7990
ESTHER : Seeliger_2012_J.Biol.Chem_287_7990
PubMedSearch : Seeliger_2012_J.Biol.Chem_287_7990
PubMedID: 22194604
Gene_locus related to this paper: myctu-Rv3822

Title : Ins and outs of Mycobacterium tuberculosis PPE family in pathogenesis and implications for novel measures against tuberculosis - Deng_2012_J.Cell.Biochem_113_1087
Author(s) : Deng W , Xie J
Ref : Journal of Cellular Biochemistry , 113 :1087 , 2012
Abstract : Deng_2012_J.Cell.Biochem_113_1087
ESTHER : Deng_2012_J.Cell.Biochem_113_1087
PubMedSearch : Deng_2012_J.Cell.Biochem_113_1087
PubMedID: 22275049

Title : The PE-PPE domain in mycobacterium reveals a serine alpha\/beta hydrolase fold and function: an in-silico analysis - Sultana_2011_PLoS.One_6_e16745
Author(s) : Sultana R , Tanneeru K , Guruprasad L
Ref : PLoS ONE , 6 :e16745 , 2011
Abstract : Sultana_2011_PLoS.One_6_e16745
ESTHER : Sultana_2011_PLoS.One_6_e16745
PubMedSearch : Sultana_2011_PLoS.One_6_e16745
PubMedID: 21347309
Gene_locus related to this paper: myctu-Rv0151c , myctu-Rv0159c , myctu-Rv0160c , myctu-Rv1184c , myctu-Rv1800 , myctu-Rv3822

Title : Sequence analysis corresponding to the PPE and PE proteins in Mycobacterium tuberculosis and other genomes - Adindla_2003_J.Biosci_28_169
Author(s) : Adindla S , Guruprasad L
Ref : J Biosci , 28 :169 , 2003
Abstract : Adindla_2003_J.Biosci_28_169
ESTHER : Adindla_2003_J.Biosci_28_169
PubMedSearch : Adindla_2003_J.Biosci_28_169
PubMedID: 12711809

No structure scheme yet for this family

Genes Proteins in PE-PPE family (92)

Fragments of genes in PE-PPE family (2)

No fragment of genes

Substrates in PE-PPE family (1)

Inhibitors in PE-PPE family (2)