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Family Report for: PHB_depolymerase_PhaZ

PHB_depolymerase_PhaZ



Relationship
Block X
Parent Family : Abhydrolase_6

Comment
C-terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This enzyme degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid. Intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting.

Database
Sequences
Interpro
|
IPR010915 (Polyhydroxyalkanoate depolymerase), IPR009656 (PHB de-polymerase, C-terminal)
PIRSF
|
Pdoc
|
PFam
|
PF06850 (PHB_depo_C)
Prints
|
Prosite
|
no EC number



Peptide in
|Fasta
Nucleotide in
|Fasta
Alignment with Multalin
|Text only/graphic display
Seed alignment with MAFFT
|No colour/coloured with Mview
Alignment with MAFFT
|No colour/coloured with Mview
Dendrogram
|Graphical display, obtained with the dnd file produced by Clustalw

Reference
    Title: Ralstonia eutropha H16 encodes two and possibly three intracellular Poly[D-(-)-3-hydroxybutyrate] depolymerase genes
    York GM, Lupberger J, Tian J, Lawrence AG, Stubbe J, Sinskey AJ
    Ref: Journal of Bacteriology, 185:3788, 2003 : PubMed

            

Other Papers


No structure scheme yet for this family

No Structure yet in this family

Genes Proteins in PHB_depolymerase_PhaZ family (72)

Fragments of genes in PHB_depolymerase_PhaZ family (7)

Substrates of some enzymes in the PHB_depolymerase_PhaZ family (1)

No Inhibitor



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Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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