Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9acto-q331q2

Streptomyces sp. KCTC 0041BP putative type I polyketide synthase

Comment
Only c-term PfamA Thioesterase 1142 1354


Relationship
Family|Thioesterase
Block| X
Position in NCBI Life Tree|Streptomyces sp. KCTC 0041BP
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Streptomycetales: N E > Streptomycetaceae: N E > Streptomyces: N E > Streptomyces sp. KCTC 0041BP: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AY118081
1 UniProt : Q331Q2
1 UniProt : Q331Q2
1 Interpro : Q331Q2
1 Prodom : Q331Q2
1 Pfam : Q331Q2
1 PIRSF : Q331Q2
1 SUPERFAM : Q331Q2
Sequence
Graphical view for this peptide sequence: 9acto-q331q2
Colored MSA for Thioesterase (raw)
LICCAGTAVASGPEEFTALAAALDNRLTVSALRQPGFRADELLPGSLDGL
LDAQADAVLRHTGDRPYALLGHSAGGALAHALTCRLEERGAGPTALILAD
VYLPSSPGAMGVWRNEMLDWVMQRSVVSIDDSRLTAMGAYNRMLLEWVPR
PTKAPVLFLRATEPVGQWSGEPESWRARWDGGDHTAVDVPGTHLTLMTEH
ARHLAATVRSWLDTL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

LICCAGTAVASGPEEFTALAAALDNRLTVSALRQPGFRADELLPGSLDGL
LDAQADAVLRHTGDRPYALLGHSAGGALAHALTCRLEERGAGPTALILAD
VYLPSSPGAMGVWRNEMLDWVMQRSVVSIDDSRLTAMGAYNRMLLEWVPR
PTKAPVLFLRATEPVGQWSGEPESWRARWDGGDHTAVDVPGTHLTLMTEH
ARHLAATVRSWLDTL



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer