Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9acto-q52v49

Streptomyces aizunensis polyketide synthase type i

Relationship
Family|Thioesterase
Block| X
Position in NCBI Life Tree|Streptomyces aizunensis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Streptomycetales: N E > Streptomycetaceae: N E > Streptomyces: N E > Streptomyces aizunensis: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AY899214
1 UniProt : Q52V49
1 UniProt : Q52V49
1 Interpro : Q52V49
1 Prodom : Q52V49
1 Pfam : Q52V49
1 PIRSF : Q52V49
1 SUPERFAM : Q52V49
Sequence
Graphical view for this peptide sequence: 9acto-q52v49
Colored MSA for Thioesterase (raw)
TRPGLVCFSSILSISGPHQYARFASAFRGRRDVHALGAPGFLRGEQLPSA
TDAVIEAQAEAVLRHADGAPFVLLGHSSGGMLAHAVAGRLESEGVFPQAL
VMIDIYSHDDDAIIGIQPGLSEGMDERQDTYVPVDDNRLLAMGAYFRLFG
GWKPEVVKTPTLLVRAGERFFDWTRSTDGDWRSYWDLDHTALDVPGNHFT
MMEEHAPTTAQAVEGWLDTTG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

TRPGLVCFSSILSISGPHQYARFASAFRGRRDVHALGAPGFLRGEQLPSA
TDAVIEAQAEAVLRHADGAPFVLLGHSSGGMLAHAVAGRLESEGVFPQAL
VMIDIYSHDDDAIIGIQPGLSEGMDERQDTYVPVDDNRLLAMGAYFRLFG
GWKPEVVKTPTLLVRAGERFFDWTRSTDGDWRSYWDLDHTALDVPGNHFT
MMEEHAPTTAQAVEGWLDTTG


Reference
    Title: Microbial genomics as a guide to drug discovery and structural elucidation: ECO-02301, a novel antifungal agent, as an example
    McAlpine JB, Bachmann BO, Piraee M, Tremblay S, Alarco AM, Zazopoulos E, Farnet CM
    Ref: Journal of Natural Products, 68:493, 2005 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer