Gene_Locus Report
Biblio print
Add to basket
Go to basket
Tree Display
AceDB Schema
XML Display
Feedback

Gene_locus Report for: 9bace-a5zf12

Bacteroides caccae, Bacteroides sp., Bacteroides xylanisolvens, Bacteroides ovatus, Putative uncharacterized protein

Comment
Other strains: Bacteroides caccae ATCC 43185 Bacteroides sp. (D1; 2_1_22), Bacteroides xylanisolvens (SD CC 1b; XB1A), Bacteroides ovatus SD CC 2a


Relationship
Family|DPP4N_Peptidase_S9
Block| X
Position in NCBI Life Tree|Bacteroides caccae ATCC 43185
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > FCB group: N E > Bacteroidetes/Chlorobi group: N E > Bacteroidetes: N E > Bacteroidia: N E > Bacteroidales: N E > Bacteroidaceae: N E > Bacteroides: N E > Bacteroides caccae: N E > Bacteroides caccae ATCC 43185: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 3 more: AAVM02000002, ACAB02000089, GG705173
>3 UniProt links 2 more: A5ZF12, C3Q9I3, D0TN84
>3 UniProt links 2 more: A5ZF12, C3Q9I3, D0TN84
>3 Interpro links 2 more: A5ZF12, C3Q9I3, D0TN84
>3 Pfam links 2 more: A5ZF12, C3Q9I3, D0TN84
>3 PIRSF links 2 more: A5ZF12, C3Q9I3, D0TN84
>3 SUPERFAM links 2 more: A5ZF12, C3Q9I3, D0TN84
Sequence
Peptide
Graphical view for this peptide sequence: 9bace-a5zf12
Colored MSA for DPP4N_Peptidase_S9 (raw) 
MKNSLFRYLCLAVALVSCNLAGAQQKANYQLAEKFRLLEQNPIDKYSTEV
RPTFINDTDCFYYSFTTREGKKYYYVNPKKKEKRLLFDTDELLSKIAVYT
KKAYSSADPHLSFTFMKDNETIRIDFDRGLYTYNIHTKELKQLDEKPTYK
TGDPYWMKYSPDSLYFLYASKDNLYFVGNPKKGQDTIPVQLTTDGMPDYT
FNREDEGKMEGRFGAESAHWIPGSHRFYAVREDNRKVRDLWVINSLSKPS
PELITYKAELAGDKNVTQYELLLGDIDKREVKKVDINRWPDQYIDVLYAS
KDGKRLYFQRYNRTWNQSDICEVDVETGKVRVVIHEENKPYLDYQMRNVS
FLNDGKEILFRSERNGWGHYYLYDTATGNLKNQLTDGTWVAGPVAQIDTV
GRKMYFYGYGREKGIDPYYYILYEAHLDRPNALRLLTPENASHEVSISPS
CRYLVDSYSTVSQEPVNVVRNRNGKVIMTLEKPDLQPVYEMGWKAPERFK
VKAADGVTDLYGVMWKPADFDSTKVYPIISNVYPGPFFEYVPTRFTINDV
YNTRLAQLGFIVITVGHRGGTPMRGKAYHTYGYNNMRDYPLADDKYAIEQ
LAARYPFIDATKVGIYGHSGGGFMSAAAICTYPDFYSAAVSSAGNHDNRI
YNKGFVEIHYGVDEKVTTTKDSLGVESKTYNYSVRVRPNQELAKNYKHGL
LLFTGAIDQTVNPANTLRLVDALIKADKDFDMFVLPKCTHGFFGESESFF
EHKMWRHFARLLLHDNSADCDIDLNKDMIKDERRR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
MKNSLFRYLCLAVALVSCNLAGAQQKANYQLAEKFRLLEQNPIDKYSTEV
RPTFINDTDCFYYSFTTREGKKYYYVNPKKKEKRLLFDTDELLSKIAVYT
KKAYSSADPHLSFTFMKDNETIRIDFDRGLYTYNIHTKELKQLDEKPTYK
TGDPYWMKYSPDSLYFLYASKDNLYFVGNPKKGQDTIPVQLTTDGMPDYT
FNREDEGKMEGRFGAESAHWIPGSHRFYAVREDNRKVRDLWVINSLSKPS
PELITYKAELAGDKNVTQYELLLGDIDKREVKKVDINRWPDQYIDVLYAS
KDGKRLYFQRYNRTWNQSDICEVDVETGKVRVVIHEENKPYLDYQMRNVS
FLNDGKEILFRSERNGWGHYYLYDTATGNLKNQLTDGTWVAGPVAQIDTV
GRKMYFYGYGREKGIDPYYYILYEAHLDRPNALRLLTPENASHEVSISPS
CRYLVDSYSTVSQEPVNVVRNRNGKVIMTLEKPDLQPVYEMGWKAPERFK
VKAADGVTDLYGVMWKPADFDSTKVYPIISNVYPGPFFEYVPTRFTINDV
YNTRLAQLGFIVITVGHRGGTPMRGKAYHTYGYNNMRDYPLADDKYAIEQ
LAARYPFIDATKVGIYGHSGGGFMSAAAICTYPDFYSAAVSSAGNHDNRI
YNKGFVEIHYGVDEKVTTTKDSLGVESKTYNYSVRVRPNQELAKNYKHGL
LLFTGAIDQTVNPANTLRLVDALIKADKDFDMFVLPKCTHGFFGESESFF
EHKMWRHFARLLLHDNSADCDIDLNKDMIKDERRR


No Reference
Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer