Gene_locus Report for: 9bace-c3rdl3

Bacteroides dorei; Bacteroides sp. Putative uncharacterized protein

Comment

Other strains: Bacteroides dorei (5_1_36/D4; DSM 17855); Bacteroides sp. (9_1_42FAA ; 3_1_33FAA)

Relationship

Family	\|	Abhydrolase_7
Block	\|	X
Position in NCBI Life Tree	\|	Bacteroides dorei 5_1_36/D4

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > FCB group: N E > Bacteroidetes/Chlorobi group: N E > Bacteroidetes: N E > Bacteroidia: N E > Bacteroidales: N E > Bacteroidaceae: N E > Bacteroides: N E > Bacteroides dorei: N E > Bacteroides dorei 5_1_36/D4: N E

There are 3 a/b hydrolases in Bacteroides dorei 5_1_36/D4 view in a: Table

Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data

Molecular evidence		Database
No mutation No structure No kinetic No Substrate No inhibitor		>3 Genbank links 4 more: EQ999650, ABWZ01000069, EQ973133 3 UniProt : C3RDL3, B6W167, D1K7C4 >3 UniProt links 3 more: C3RDL3, B6W167, D1K7C4 >3 Interpro links 3 more: C3RDL3, B6W167, D1K7C4 >3 Pfam links 3 more: C3RDL3, B6W167, D1K7C4 >3 PIRSF links 3 more: C3RDL3, B6W167, D1K7C4 >3 SUPERFAM links 3 more: C3RDL3, B6W167, D1K7C4

Sequence

Peptide

Graphical view for this peptide sequence: 9bace-c3rdl3
Colored MSA for Abhydrolase_7 (raw)
MKNAVICLLLFGICLTVSAQEKVETVSMRYETQNDMPLFYQKLKESLTYP MAWGNSSIRNFEKWREEARKVLLDCMQPAPPVAAFDKEVIDIERREGYTV EKILFNVSKYSRVPAYLLVPEGKGPFPAVLLLHDHGAHFSIGKEKMVRPF GVEASVTANADDWAERCYDKQYVGDYLTSHGYVVLAVDALFWGERGRKEG VRYDSQQALAANMLQMGMSWGALIVWDDIRSAEFLATLPMVSKDRIGTMG FSMGAHRAWMVSAATDVVKAGAAVCWMNTTDSLMTLTNNQNKGGSAYSMI IPGIRNWMDYPHVASIACPKPMLFINGLRDKLFPVKGVESAFSTMQDVWK GQSVENLLTTKFYDLPHFCSKEIQADILEFFNQNLK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
MKNAVICLLLFGICLTVSAQEKVETVSMRYETQNDMPLFYQKLKESLTYP
MAWGNSSIRNFEKWREEARKVLLDCMQPAPPVAAFDKEVIDIERREGYTV
EKILFNVSKYSRVPAYLLVPEGKGPFPAVLLLHDHGAHFSIGKEKMVRPF
GVEASVTANADDWAERCYDKQYVGDYLTSHGYVVLAVDALFWGERGRKEG
VRYDSQQALAANMLQMGMSWGALIVWDDIRSAEFLATLPMVSKDRIGTMG
FSMGAHRAWMVSAATDVVKAGAAVCWMNTTDSLMTLTNNQNKGGSAYSMI
IPGIRNWMDYPHVASIACPKPMLFINGLRDKLFPVKGVESAFSTMQDVWK
GQSVENLLTTKFYDLPHFCSKEIQADILEFFNQNLK

No Reference

Send your questions or comments to :Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.

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