Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9bact-102Pee006

uncultured bacterium 176763, pEE006 102 YNP6_02150 Environmental sample

Comment
176763 pEE006 102 YNP6_02150 Environmental sample


Relationship
Family|Carb_B_Bacteria
Block| C
Position in NCBI Life Tree|uncultured bacterium
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > environmental samples: N E > uncultured bacterium: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





1 substrate:
Polyethylene-terephthalate
No inhibitor
Sequence
Graphical view for this peptide sequence: 9bact-102Pee006
Colored MSA for Carb_B_Bacteria (raw)
MQSPAQSSAPTVELDSGAIAGSTADGVVSFKGIPYAAPPVGNLRWRAPQP
VASWTGVRAATEYGYDCIQLPLEGDAAASGGEMSEDCLVLNVWRPAEIAP
GERLPVLVWIHGGGFLNGSAAAPIYDGTAFAQQGLVVVSFNYRLGRLGFF
AHPALTAANEGPLGNYGLMDQIAALEWVQRNIAAFGGDPARITLMGQSAG
GISVMYHLTAPESQGLFHQAAVLSGGGRTYLLGLRNLRESTDALPSAEQS
GLAFGRRFGIRGRGRAALRSLRSLSAEEVNGDLSMAALVEKPADYAGLE
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MQSPAQSSAPTVELDSGAIAGSTADGVVSFKGIPYAAPPVGNLRWRAPQP
VASWTGVRAATEYGYDCIQLPLEGDAAASGGEMSEDCLVLNVWRPAEIAP
GERLPVLVWIHGGGFLNGSAAAPIYDGTAFAQQGLVVVSFNYRLGRLGFF
AHPALTAANEGPLGNYGLMDQIAALEWVQRNIAAFGGDPARITLMGQSAG
GISVMYHLTAPESQGLFHQAAVLSGGGRTYLLGLRNLRESTDALPSAEQS
GLAFGRRFGIRGRGRAALRSLRSLSAEEVNGDLSMAALVEKPADYAGLE


Reference
    Title: Sourcing thermotolerant poly(ethylene terephthalate) hydrolase scaffolds from natural diversity
    Erickson E, Gado JE, Avilan L, Bratti F, Brizendine RK, Cox PA, Gill R, Graham R, Kim DJ and McGeehan JE <11 more author(s)>
    Ref: Nat Commun, 13:7850, 2022 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer