Gene_locus Report for: 9bact-b4d3q8.1 Chthoniobacter flavus Ellin428. Alpha/beta hydrolase fold-3 domain protein
Comment
One gene concatened with a fragment Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Bacteria: N E > PVC group: N E > Verrucomicrobia: N E > Spartobacteria: N E > Chthoniobacterales: N E > Chthoniobacteraceae: N E > Chthoniobacter: N E > Chthoniobacter flavus: N E > Chthoniobacter flavus Ellin428: N E 6_AlphaBeta_hydrolase :
9bact-b4cw55 Chthoniobacter flavus Ellin428 Alpha/beta hydrolase fold protein ,
9bact-b4cx55 Chthoniobacter flavus Ellin428 Putative uncharacterized protein ,
9bact-b4cyu5 Chthoniobacter flavus Ellin428 Putative uncharacterized protein ,
9bact-b4daa7 Chthoniobacter flavus Ellin428 Putative uncharacterized protein ,
9bact-b4db04 Chthoniobacter flavus Ellin428 Putative uncharacterized protein ,
9bact-b4db80 Chthoniobacter flavus Ellin428 Putative uncharacterized protein .
A85-EsteraseD-FGH :
9bact-b4d0x0 Chthoniobacter flavus Ellin428 Putative esterase .
A85-Feruloyl-Esterase :
9bact-b4d2n4 Chthoniobacter flavus Ellin428 Putative esterase ,
9bact-b4d093 Chthoniobacter flavus Ellin428 Putative esterase ,
9bact-b4d575 Chthoniobacter flavus Ellin428 Putative esterase .
A85-IroE-IroD-Fes-Yiel :
9bact-b4d8d2 Chthoniobacter flavus Ellin428 SMP-30/Gluconolaconase/LRE domain protein ,
9bact-b4d725 Chthoniobacter flavus Ellin428 Putative esterase ,
9bact-b4da39 Chthoniobacter flavus Ellin428 Putative esterase ,
9bact-b4dck2 Chthoniobacter flavus Ellin428 Putative esterase .
Abhydrolase_7 :
9bact-b4d3t9 Chthoniobacter flavus Ellin428 Putative uncharacterized protein ,
9bact-b4d5p3 Chthoniobacter flavus Ellin428 Putative uncharacterized protein .
abh_upf0017 :
9bact-b4d914 Chthoniobacter flavus Ellin428 Alpha/beta hydrolase fold protein .
Acetyl-esterase_deacetylase :
9bact-b4cyt2 Chthoniobacter flavus Ellin428 Putative uncharacterized protein ,
9bact-b4d373 Chthoniobacter flavus Ellin428 Acetyl xylan esterase .
BD-FAE :
9bact-b4cun7 Chthoniobacter flavus Ellin428 Putative uncharacterized protein ,
9bact-b4d9a1 Chthoniobacter flavus Ellin428 Putative para-nitrobenzyl esterase ,
9bact-b4dc95 Chthoniobacter flavus Ellin428. Putative lipase/esterase ,
9bact-b4d3q8.2 Chthoniobacter flavus Ellin428. Alpha/beta hydrolase fold-3 domain protein .
Carboxypeptidase_S10 :
9bact-b4d1u0 Chthoniobacter flavus Ellin428 Peptidase S10 serine carboxypeptidase .
DPP4N_Peptidase_S9 :
9bact-b4cza3 Chthoniobacter flavus Ellin428 Peptidase S9 prolyl oligopeptidase active site domain protein .
Haloalkane_dehalogenase-HLD2 :
9bact-b4dav5 Chthoniobacter flavus Ellin428 Haloalkane dehalogenase .
Lipase_2 :
9bact-b4d393 Chthoniobacter flavus Ellin428 Lipase class 2 .
Monoglyceridelipase_lysophospholip :
9bact-b4d2s5 Chthoniobacter flavus Ellin428 Alpha/beta hydrolase fold protein .
Pectin_methylesterase :
9bact-b4cy19 Chthoniobacter flavus Ellin428 Putative uncharacterized protein Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: 9bact-b4d3q8.1 Colored MSA for BD-FAE (raw)
MHPRLSPFLAVTLAGAVAGSLFAADTPSAPAAPATPAAKPAATPDPTLPK
PTLENVHYGDHERQVLDFYKAESDKPTPLLFFIHGGGWVTGDKKNPGYLK
QMLANGISVVSINYRYSWQAQLAGIKPPVKAPLEDAARALQFVRSKAAEW
NIDKQRIGASGGSAGACSSIWLAMHDDMADPKSTDPIAHESTRLWCAAVN
GAQTSLDPEQLKEWTPNSRYGGHAFGLMDPNNLKTRDTRFAEFLARRDEF
LPWIKEYSPIEHASADDPPIYLIYAAPPALGQEQKDPTHTANYGVKLQEK
LHRLGVECELVYPGAPEVKHKSIDAFLIEKLKGPAPKSARTKPIYHPPQG
VEVQEDVVYGKVD
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M H P R L S P F L A V T L A G A V A G S L F A A D T P S A P A A P A T P A A K P A A T P D P T L P K P T L E N V H Y G D H E R Q V L D F Y K A E S D K P T P L L F F I H G G G W V T G D K K N P G Y L K Q M L A N G I S V V S I N Y R Y S W Q A Q L A G I K P P V K A P L E D A A R A L Q F V R S K A A E W N I D K Q R I G A S G G S A G A C S S I W L A M H D D M A D P K S T D P I A H E S T R L W C A A V N G A Q T S L D P E Q L K E W T P N S R Y G G H A F G L M D P N N L K T R D T R F A E F L A R R D E F L P W I K E Y S P I E H A S A D D P P I Y L I Y A A P P A L G Q E Q K D P T H T A N Y G V K L Q E K L H R L G V E C E L V Y P G A P E V K H K S I D A F L I E K L K G P A P K S A R T K P I Y H P P Q G V E V Q E D V V Y G K V D
Reference
Title: Genome sequence of Chthoniobacter flavus Ellin428, an aerobic heterotrophic soil bacteriumKant R , van Passel MW , Palva A , Lucas S , Lapidus A , Glavina Del Rio T , Dalin E , Tice H , Bruce D and Smidt H <8 more author(s)> Kant R , van Passel MW , Palva A , Lucas S , Lapidus A , Glavina Del Rio T , Dalin E , Tice H , Bruce D , Goodwin L , Pitluck S , Larimer FW , Land ML , Hauser L , Sangwan P , de Vos WM , Janssen PH , Smidt H (- 8) Ref: Journal of Bacteriology, 193 :2902, 2011 : PubMed Abstract ESTHER: Kant_2011_J.Bacteriol_193_2902 PubMedSearch: Kant 2011 J.Bacteriol 193 2902 PubMedID: 21460085 Gene_locus related to this paper: 9bact-b4cw55 ,
9bact-b4cx55 ,
9bact-b4cy19 ,
9bact-b4cyt2 ,
9bact-b4cyu5 ,
9bact-b4cza3 ,
9bact-b4d1u0 ,
9bact-b4d2s5 ,
9bact-b4d373 ,
9bact-b4d393 ,
9bact-b4d914 ,
9bact-b4daa7 ,
9bact-b4dav5 ,
9bact-b4db04 ,
9bact-b4dc95 ,
9bact-b4d3q8.1 ,
9bact-b4d3q8.2 Abstract
Chthoniobacter flavus Ellin428 is the first isolate from the class Spartobacteria of the bacterial phylum Verrucomicrobia. C. flavus Ellin428 can metabolize many of the saccharide components of plant biomass but is incapable of growth on amino acids or organic acids other than pyruvate.
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