Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9brad-q35qw4

Bradyrhizobium sp. BTAi1 non-ribosomal peptide synthase:amino acid adenylation

Comment
only c-term PfamA Thioesterase 2348 2584


Relationship
Family|Thioesterase
Block| X
Position in NCBI Life Tree|Bradyrhizobium sp. BTAi1
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Rhizobiales: N E > Bradyrhizobiaceae: N E > Bradyrhizobium: N E > Bradyrhizobium sp. BTAi1: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AALJ01000001
Sequence
Graphical view for this peptide sequence: 9brad-q35qw4
Colored MSA for Thioesterase (raw)
VQPTGPYLLGGWSFGGSVAYEISCQLAAAGERVEQLILLDSFGPHDGRQA
FVAAFDAAARAAFLDVPFYRDMPDEIRDRMARVIRMENAMLADFRPQRYD
GPVLLLKANEAETPPEPCVAAYPSGFLDMLQATQAAPDNFWGRVASRLIV
RPVAGTHGGLMSGAAVAEIAAILSQTCLEPSNIEDSSIMGSAP
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

VQPTGPYLLGGWSFGGSVAYEISCQLAAAGERVEQLILLDSFGPHDGRQA
FVAAFDAAARAAFLDVPFYRDMPDEIRDRMARVIRMENAMLADFRPQRYD
GPVLLLKANEAETPPEPCVAAYPSGFLDMLQATQAAPDNFWGRVASRLIV
RPVAGTHGGLMSGAAVAEIAAILSQTCLEPSNIEDSSIMGSAP



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer