Gene_Locus Report

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Gene_locus Report for: 9burk-b1tdz7

Burkholderia ambifaria (strains MC40-6; MEX-5; ATCC BAA-244 / AMMD; IOP40-10) Alpha/beta hydrolase fold

Relationship
Family|abh_upf0017
Block| X
Position in NCBI Life Tree|Burkholderia ambifaria MEX-5
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Betaproteobacteria: N E > Burkholderiales: N E > Burkholderiaceae: N E > Burkholderia: N E > Burkholderia cepacia complex: N E > Burkholderia ambifaria: N E > Burkholderia ambifaria MEX-5: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 1 more: ABLK01000316, CP001025, CP000440
>3 UniProt links 1 more: B1TDZ7, B1YVX1, Q0BC85
>3 UniProt links 1 more: B1TDZ7, B1YVX1, Q0BC85
>3 Interpro links 1 more: B1TDZ7, B1YVX1, Q0BC85
>3 Pfam links 1 more: B1TDZ7, B1YVX1, Q0BC85
>3 PIRSF links 1 more: B1TDZ7, B1YVX1, Q0BC85
>3 SUPERFAM links 1 more: B1TDZ7, B1YVX1, Q0BC85
Sequence
Graphical view for this peptide sequence: 9burk-b1tdz7
Colored MSA for abh_upf0017 (raw)
MSTASPPTSPLTGAPAPDDDSLRYRAPRWLPNSHVQTIVPALFARRPAVA
YRRERWETPDHDFIDLDWVAHLDSAAPPPDAPLFVLFHGLEGSSGSHYAL
AMMAAARAKGWHAVVPHFRSCSGEMNRQPRFYHLADSAEVDWILQRLATR
HRGPIVAAGVSLGGNVLLRWLGEHRSDTSIVHAAAAISTPIDVHAGGRAL
SQGFAMVYTRSFLKTLKRKALAKLDQYPGLFDRDAMLRAVTMRDFDEVVT
APLHGFADADDYWTQATTRPLLPAIDVPTLILNARNDPFLPESALPSAAD
VSPAIELDQPAHGGHAGFMTGPFPGRLDWLSARVFGYCSKFVDHG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSTASPPTSPLTGAPAPDDDSLRYRAPRWLPNSHVQTIVPALFARRPAVA
YRRERWETPDHDFIDLDWVAHLDSAAPPPDAPLFVLFHGLEGSSGSHYAL
AMMAAARAKGWHAVVPHFRSCSGEMNRQPRFYHLADSAEVDWILQRLATR
HRGPIVAAGVSLGGNVLLRWLGEHRSDTSIVHAAAAISTPIDVHAGGRAL
SQGFAMVYTRSFLKTLKRKALAKLDQYPGLFDRDAMLRAVTMRDFDEVVT
APLHGFADADDYWTQATTRPLLPAIDVPTLILNARNDPFLPESALPSAAD
VSPAIELDQPAHGGHAGFMTGPFPGRLDWLSARVFGYCSKFVDHG



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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