Gene_Locus Report

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Gene_locus Report for: 9burk-k0i3l8

Acidovorax sp. KKS102. Alpha/beta hydrolase fold protein

Relationship
Family|NFM-deformylase
Block| X
Position in NCBI Life Tree|Acidovorax sp. KKS102
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Betaproteobacteria: N E > Burkholderiales: N E > Comamonadaceae: N E > Acidovorax: N E > Acidovorax sp. KKS102: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP003872
1 UniProt : K0I3L8
1 UniProt : K0I3L8
1 Interpro : K0I3L8
1 Pfam : K0I3L8
1 PIRSF : K0I3L8
1 SUPERFAM : K0I3L8
Sequence
Graphical view for this peptide sequence: 9burk-k0i3l8
Colored MSA for NFM-deformylase (raw)
MSSTFLYGFHVPANGIRHHLLRYGGKGPKLLVVPGITSPAVTWGFVAETL
AQHFDVNVLDVRGRGLSSSGPELDYGLDALATDVTAVLSALDWQEATVLG
HSMGARIAVRAAAHMPSRFGRLLLIDPPVGGPGRRPYPAPLAWYIDSIRL
MAAGQPWEELKRFSPTWTEAQLRLRAQWLHTCDEKAIEEAWNGFHNDDVH
ANFASLTVPGLLMIAGRGGVILDEDAAEIARLAPGLKQVVATDAGHMIPW
DDEAGFFRLLGQYLNLSFHPEGA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSSTFLYGFHVPANGIRHHLLRYGGKGPKLLVVPGITSPAVTWGFVAETL
AQHFDVNVLDVRGRGLSSSGPELDYGLDALATDVTAVLSALDWQEATVLG
HSMGARIAVRAAAHMPSRFGRLLLIDPPVGGPGRRPYPAPLAWYIDSIRL
MAAGQPWEELKRFSPTWTEAQLRLRAQWLHTCDEKAIEEAWNGFHNDDVH
ANFASLTVPGLLMIAGRGGVILDEDAAEIARLAPGLKQVVATDAGHMIPW
DDEAGFFRLLGQYLNLSFHPEGA


Reference
    Title: Complete genome sequence of Acidovorax sp. strain KKS102, a polychlorinated-biphenyl degrader
    Ohtsubo Y, Maruyama F, Mitsui H, Nagata Y, Tsuda M
    Ref: Journal of Bacteriology, 194:6970, 2012 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
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