Gene_Locus Report

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Gene_locus Report for: 9burk-q3f1w1

Burkholderia ambifaria AMMD amino acid adenylation

Comment
only c-term PfamA Thioesterase 1053 1285


Relationship
Family|Thioesterase
Block| X
Position in NCBI Life Tree|Burkholderia ambifaria AMMD
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Betaproteobacteria: N E > Burkholderiales: N E > Burkholderiaceae: N E > Burkholderia: N E > Burkholderia cepacia complex: N E > Burkholderia ambifaria: N E > Burkholderia ambifaria AMMD: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : ABI87243, WP_011656967
1 UniProt : Q0BF30
1 UniProt : Q0BF30
1 Interpro : Q0BF30
1 Prodom : Q0BF30
1 Pfam : Q0BF30
1 PIRSF : Q0BF30
1 SUPERFAM : Q0BF30
Sequence
Graphical view for this peptide sequence: 9burk-q3f1w1
Colored MSA for Thioesterase (raw)
GAPAQRLICIHPADGLAWSYLRVAAYLPDTTIDGLQLSVGDTNGAADFDA
LVDTYVRRVRALQPDGPYHLLGWSVGGALAYAVAAALERAGAPVGVLALM
DSYPSSAWTAQPQPETGDALRILLTVNGDFDTAALSDVLLRQRLLRANSP
FAALGGAGLDALVGATLRQMRLFRAAPPPHYGGELLLFNATRKRPGTPTP
DSWAALRPVALTTCVALDCSHDGMSDPEPMAAIGAALTERLAAWADMETV
MRNANR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

GAPAQRLICIHPADGLAWSYLRVAAYLPDTTIDGLQLSVGDTNGAADFDA
LVDTYVRRVRALQPDGPYHLLGWSVGGALAYAVAAALERAGAPVGVLALM
DSYPSSAWTAQPQPETGDALRILLTVNGDFDTAALSDVLLRQRLLRANSP
FAALGGAGLDALVGATLRQMRLFRAAPPPHYGGELLLFNATRKRPGTPTP
DSWAALRPVALTTCVALDCSHDGMSDPEPMAAIGAALTERLAAWADMETV
MRNANR



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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