Gene_Locus Report

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Gene_locus Report for: 9burk-q4b3g8

Polaromonas sp. JS666 terminal

Relationship
Family|PhaC_cen_dom
Block| X
Position in NCBI Life Tree|Polaromonas sp. JS666
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Betaproteobacteria: N E > Burkholderiales: N E > Comamonadaceae: N E > Polaromonas: N E > Polaromonas sp. JS666: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : WP_011482154, ABE43153
1 UniProt : Q12E89
1 Interpro : Q12E89
1 Pfam : Q12E89
1 PIRSF : Q12E89
1 SUPERFAM : Q12E89
Sequence
Graphical view for this peptide sequence: 9burk-q4b3g8
Colored MSA for PhaC_cen_dom (raw)
MALSNPRPEGQHALPPMDVPLKLWLARQAHGISPASLTLAYTDWLSHLLV
SPSKQAELGASALRKWLLWLQYAPQPWQQDRPVSVESPSQDKRFSRPEWQ
APPFNVLAQAFLQQQQWWAEAMTGVRGVSRHHEEVAAFITRQWLDMLSPS
NFIATNPQVLKETLANGGVNLATGLANWSRDAVAVLTDGKPRGVEAFAPG
QGVALTPGKVVFRNHLIELIQYEPVTAEVDTEPVLIVPSWIMKYYILDLT
PDDSLVKYMVAQGHTVFMISWRNPDSGDRDLGMDDYLELGVMAALQAVRS
VRPRARIHAMGYCLGGTLLAIAAAALAGSSPNLLKTVTLLAAQADFHEPG
ELGLFIDESQIAFVEDLMAEWGYLDERQMAGAFALINSKDLVWSKLVHEY
LMGAHTPMTALRAWNADATRLPARMHSEYLRSLYLHNDLAAGRYRAAGQV
VRLSHIELPLFVVATESDHVSPWHSVYKIHRLTSSPVSFVLSSGGHNVGI
VNPPAGPAAHPQASYRIASHAPGKAPAHPGDWLDTAARREGSWWPGWHDW
LNKHSSGKVKPPRVNAVMFEGAPLAAPGRYVHLD
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MALSNPRPEGQHALPPMDVPLKLWLARQAHGISPASLTLAYTDWLSHLLV
SPSKQAELGASALRKWLLWLQYAPQPWQQDRPVSVESPSQDKRFSRPEWQ
APPFNVLAQAFLQQQQWWAEAMTGVRGVSRHHEEVAAFITRQWLDMLSPS
NFIATNPQVLKETLANGGVNLATGLANWSRDAVAVLTDGKPRGVEAFAPG
QGVALTPGKVVFRNHLIELIQYEPVTAEVDTEPVLIVPSWIMKYYILDLT
PDDSLVKYMVAQGHTVFMISWRNPDSGDRDLGMDDYLELGVMAALQAVRS
VRPRARIHAMGYCLGGTLLAIAAAALAGSSPNLLKTVTLLAAQADFHEPG
ELGLFIDESQIAFVEDLMAEWGYLDERQMAGAFALINSKDLVWSKLVHEY
LMGAHTPMTALRAWNADATRLPARMHSEYLRSLYLHNDLAAGRYRAAGQV
VRLSHIELPLFVVATESDHVSPWHSVYKIHRLTSSPVSFVLSSGGHNVGI
VNPPAGPAAHPQASYRIASHAPGKAPAHPGDWLDTAARREGSWWPGWHDW
LNKHSSGKVKPPRVNAVMFEGAPLAAPGRYVHLD



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
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