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Gene_locus Report for: 9chlo-i0z4k0

Coccomyxa subellipsoidea Alpha/beta-hydrolase

Comment
C-169


Relationship
Family|Chlorophyllase_Plant
Block| L
Position in NCBI Life Tree|Coccomyxa subellipsoidea
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Chlorophyta: N E > Trebouxiophyceae: N E > Trebouxiophyceae incertae sedis: N E > Coccomyxaceae: N E > Coccomyxa: N E > Coccomyxa subellipsoidea: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AGSI01000004
1 UniProt : I0Z4K0
1 UniProt : I0Z4K0
1 Interpro : I0Z4K0
1 Pfam : I0Z4K0
1 PIRSF : I0Z4K0
1 SUPERFAM : I0Z4K0
Sequence
Graphical view for this peptide sequence: 9chlo-i0z4k0
Colored MSA for Chlorophyllase_Plant (raw)
MLSLNVVYPRDGKAHGLQPPYPLAVISSGFLTSASSYLSYARRLASWGYT
VVMYDKVESATEPLDDRLCVELIREIIDWARIDPIVSQLADTDTTYLCGH
SRGGKVSALAAVVDPRVKAVCLLDPVDVTVCAPQGPDFPSAVAAVRHMSR
GVPLAVVGSGRAGDCVPKDSNYRRYFNACQGPAWEVVLASAGHFQFLDEQ
SMLQRAVCAVGPVDDQSVRRVAQTVMVAWGEIMVKRRP
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MLSLNVVYPRDGKAHGLQPPYPLAVISSGFLTSASSYLSYARRLASWGYT
VVMYDKVESATEPLDDRLCVELIREIIDWARIDPIVSQLADTDTTYLCGH
SRGGKVSALAAVVDPRVKAVCLLDPVDVTVCAPQGPDFPSAVAAVRHMSR
GVPLAVVGSGRAGDCVPKDSNYRRYFNACQGPAWEVVLASAGHFQFLDEQ
SMLQRAVCAVGPVDDQSVRRVAQTVMVAWGEIMVKRRP


Reference
    Title: The genome of the polar eukaryotic microalga Coccomyxa subellipsoidea reveals traits of cold adaptation
    Blanc G, Agarkova I, Grimwood J, Kuo A, Brueggeman A, Dunigan DD, Gurnon J, Ladunga I, Lindquist E and Van Etten JL <11 more author(s)>
    Ref: Genome Biol, 13:R39, 2012 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
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