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Gene_locus Report for: 9cyan-d8fxr9

[Oscillatoria] sp. PCC 6506. Putative uncharacterized protein

Relationship
Family|abh_upf00227
Block| X
Position in NCBI Life Tree|[Oscillatoria] sp. PCC 6506
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Cyanobacteria/Melainabacteria group: N E > Cyanobacteria: N E > Oscillatoriophycideae: N E > Oscillatoriales: N E > Microcoleaceae: N E > Kamptonema: N E > [Oscillatoria] sp. PCC 6506: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CACA01000136
1 UniProt : D8FXR9
1 UniProt : D8FXR9
1 Interpro : D8FXR9
1 Pfam : D8FXR9
1 PIRSF : D8FXR9
1 SUPERFAM : D8FXR9
Sequence
Peptide
Graphical view for this peptide sequence: 9cyan-d8fxr9
Colored MSA for abh_upf00227 (raw) 
MTQEDYCNYIYLHGFASSPQSAKAEYLSDRFFELGINLKLPDLNQGDFSH
LTLTRQLQQVEAEFRQLEKSQLSVDKGKIGLIGSSFGGLTAAILAQQNIE
VQRIILLAPAFGFLSHWLPKLGDEQLAKWQSEGYLSVYHYGKNQYLPLHY
QFAIDIAQYRDEDLQRPVPTLIFHGKDDEVIPIQSSRDFADQRPWVQLIE
LNSDHALTNVLPEIWEEMQNFCQFKVKI
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
MTQEDYCNYIYLHGFASSPQSAKAEYLSDRFFELGINLKLPDLNQGDFSH
LTLTRQLQQVEAEFRQLEKSQLSVDKGKIGLIGSSFGGLTAAILAQQNIE
VQRIILLAPAFGFLSHWLPKLGDEQLAKWQSEGYLSVYHYGKNQYLPLHY
QFAIDIAQYRDEDLQRPVPTLIFHGKDDEVIPIQSSRDFADQRPWVQLIE
LNSDHALTNVLPEIWEEMQNFCQFKVKI

Reference
    Title: The genome sequence of the cyanobacterium Oscillatoria sp. PCC 6506 reveals several gene clusters responsible for the biosynthesis of toxins and secondary metabolites
    Mejean A, Mazmouz R, Mann S, Calteau A, Medigue C, Ploux O
    Ref: Journal of Bacteriology, 192:5264, 2010 : PubMed

            


Other Papers

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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