Gene_Locus Report

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Gene_locus Report for: 9delt-a6gkn4

Plesiocystis pacifica SIR-1 2-hydroxy-6-ketonona-24-dienedioic acid hydrolase

Relationship
Family|Carbon-carbon_bond_hydrolase
Block| X
Position in NCBI Life Tree|Plesiocystis pacifica SIR-1
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > delta/epsilon subdivisions: N E > Deltaproteobacteria: N E > Myxococcales: N E > Nannocystineae: N E > Nannocystaceae: N E > Plesiocystis: N E > Plesiocystis pacifica: N E > Plesiocystis pacifica SIR-1: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : ABCS01000210
1 UniProt : A6GKN4
1 UniProt : A6GKN4
1 Interpro : A6GKN4
1 Prodom : A6GKN4
1 Pfam : A6GKN4
1 PIRSF : A6GKN4
1 SUPERFAM : A6GKN4
Sequence
Graphical view for this peptide sequence: 9delt-a6gkn4
Colored MSA for Carbon-carbon_bond_hydrolase (raw)
MSPTFEQVERDYFSRRGVEAVPRRLALERLDGEATVWTAGSGPPLLMLPG
GPFVAGSLAPLMAELSSQYTVHALERPGVGLSSTLSLRPGDLFQYARMLV
EDTLAALELDEVTLLGNSLGATMAIVHTLARPETVAKLILVSPPAGVDRE
IPAQLKVLSRPLLGKLLLTTVGKPSIEATKTMFAEAMVEDLAQVPEDLIE
LQTQAHLLPGAWMAWWVMIRGIVDSKGLRPDVELFEELPKLSVPTVMLWG
ALDKVTPPSRGEPVMRTIPNFDLRVIEGAGHMMWIDQEQATLEALRELVA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSPTFEQVERDYFSRRGVEAVPRRLALERLDGEATVWTAGSGPPLLMLPG
GPFVAGSLAPLMAELSSQYTVHALERPGVGLSSTLSLRPGDLFQYARMLV
EDTLAALELDEVTLLGNSLGATMAIVHTLARPETVAKLILVSPPAGVDRE
IPAQLKVLSRPLLGKLLLTTVGKPSIEATKTMFAEAMVEDLAQVPEDLIE
LQTQAHLLPGAWMAWWVMIRGIVDSKGLRPDVELFEELPKLSVPTVMLWG
ALDKVTPPSRGEPVMRTIPNFDLRVIEGAGHMMWIDQEQATLEALRELVA



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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