Gene_Locus Report

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Gene_locus Report for: 9delt-d9ycq3

Desulfovibrio sp. 3_1_syn3 Alpha/beta hydrolase family protein

Relationship
Family|abh_upf0017
Block| X
Position in NCBI Life Tree|Desulfovibrio sp. 3_1_syn3
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > delta/epsilon subdivisions: N E > Deltaproteobacteria: N E > Desulfovibrionales: N E > Desulfovibrionaceae: N E > Desulfovibrio: N E > Desulfovibrio sp. 3_1_syn3: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : GL384288, WP_009301498
1 UniProt : G1UNM0
1 Interpro : G1UNM0
1 Pfam : G1UNM0
1 PIRSF : G1UNM0
1 SUPERFAM : G1UNM0
Sequence
Graphical view for this peptide sequence: 9delt-d9ycq3
Colored MSA for abh_upf0017 (raw)
MAQAYTRPLPMPILPSRYTAPPGLANAHLNTIWPVLFRPRPRLPADLRRI
RIDTPDGDFLDLDLHPCASGAPRGLAVLSHGLEGNSRRKYILGLARLLTA
RGFQVLAWNMRSCSGEPNRTDRLYHMGETGDLGTVVRYAESFDLPILLAG
FSMGGNQICRYLGRGPVSPLVRAAVAVSVPCDLAGAAPVMDGPSCRLYMT
YFLRTMRRKVREKAARFPHYPSVEGLERIRTFAEFDERFTAPVYGFASAR
DYWEKNSVLADLPAVRIPLYLLMAADDPFCSPSCYPWDAARENSSLRLEV
APHGGHVGFVPWGKPYYSEQRVLEFMEEIWN
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MAQAYTRPLPMPILPSRYTAPPGLANAHLNTIWPVLFRPRPRLPADLRRI
RIDTPDGDFLDLDLHPCASGAPRGLAVLSHGLEGNSRRKYILGLARLLTA
RGFQVLAWNMRSCSGEPNRTDRLYHMGETGDLGTVVRYAESFDLPILLAG
FSMGGNQICRYLGRGPVSPLVRAAVAVSVPCDLAGAAPVMDGPSCRLYMT
YFLRTMRRKVREKAARFPHYPSVEGLERIRTFAEFDERFTAPVYGFASAR
DYWEKNSVLADLPAVRIPLYLLMAADDPFCSPSCYPWDAARENSSLRLEV
APHGGHVGFVPWGKPYYSEQRVLEFMEEIWN



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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