Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9firm-q2ahs1

Halothermothrix orenii H 168 hypothetical protein precursor

Comment
Other strains: Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562)


Relationship
Family|PGAP1
Block| X
Position in NCBI Life Tree|Halothermothrix orenii H 168
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Clostridia: N E > Halanaerobiales: N E > Halanaerobiaceae: N E > Halothermothrix: N E > Halothermothrix orenii: N E > Halothermothrix orenii H 168: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AAOZ01000003, ACL69887
1 UniProt : B8CX68
1 Interpro : B8CX68
1 Pfam : B8CX68
1 PIRSF : B8CX68
1 SUPERFAM : B8CX68
Sequence
Graphical view for this peptide sequence: 9firm-q2ahs1
Colored MSA for PGAP1 (raw)
MSNMFVLKCLTILLTTGILMILPSPDVLAEKRIDYKSRDSWNDILNHEDT
VNYPVIFIHGIGGKLSFWEKTIKTMVGSNYYEMRYIKNNKVYHNYYGEEP
ERWVWNISYYTLNGVKETIYGDLNLYARRLHKMIEIIKEITGKDKVIIVA
HSMGGLVARKYMTTNNKCWESVYKILTVGTPNEGVEVSVGIVGQLRDLKK
GSSFINNLNRDWVKMKKHHEKWGIVAGIKNNSFLIDYNFNPRATDAAGPG
FVTVSSAIPFGEWEGAFRTGVGKEAYNTPHFGFRILVEASHMDLLYHRGT
FMGIHWALMKNDR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSNMFVLKCLTILLTTGILMILPSPDVLAEKRIDYKSRDSWNDILNHEDT
VNYPVIFIHGIGGKLSFWEKTIKTMVGSNYYEMRYIKNNKVYHNYYGEEP
ERWVWNISYYTLNGVKETIYGDLNLYARRLHKMIEIIKEITGKDKVIIVA
HSMGGLVARKYMTTNNKCWESVYKILTVGTPNEGVEVSVGIVGQLRDLKK
GSSFINNLNRDWVKMKKHHEKWGIVAGIKNNSFLIDYNFNPRATDAAGPG
FVTVSSAIPFGEWEGAFRTGVGKEAYNTPHFGFRILVEASHMDLLYHRGT
FMGIHWALMKNDR



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer