Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9fuso-e5bms0

Fusobacterium sp. D12 Hydrolase

Comment
Other strains: Fusobacterium necrophorum BFTR-2; subsp. funduliforme B35; DJ-2; Fnf 1007


Relationship
Family|abh_upf0017
Block| X
Position in NCBI Life Tree|Fusobacterium sp. D12
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Fusobacteria: N E > Fusobacteriia: N E > Fusobacteriales: N E > Fusobacteriaceae: N E > Fusobacterium: N E > Fusobacterium necrophorum: N E > Fusobacterium necrophorum D12: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: 9fuso-e5bms0
Colored MSA for abh_upf0017 (raw)
MKEYKPSFLFQNAHINTCFPTLFRKVKIRYRRQRVLVGKDDFLDFDWVRR
GNSKIILLCHGLEGSSKSHYMKAFARYFSERSWDVLALNYRSCSKEPNPS
PFFYVAGKGDEISTALELTSEYQEVVLIGFSLGANKVLDYLGKEEKIPKN
VKMGVAVSPPCDLKESSLLFSKGWNRMYEQYFLWRLKRKVLKKEKIYPNL
LRGMGISIEKIQKAKTLVEFDHLLTSKLAGCKDAYDYYEKNSSLFHLKKI
HHPTLILTALDDPMMSGRCYPREEVKNNAFLHLETPKYGGHISYASFTKE
YWLEKFVFEKVELFKEEKKEVT
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKEYKPSFLFQNAHINTCFPTLFRKVKIRYRRQRVLVGKDDFLDFDWVRR
GNSKIILLCHGLEGSSKSHYMKAFARYFSERSWDVLALNYRSCSKEPNPS
PFFYVAGKGDEISTALELTSEYQEVVLIGFSLGANKVLDYLGKEEKIPKN
VKMGVAVSPPCDLKESSLLFSKGWNRMYEQYFLWRLKRKVLKKEKIYPNL
LRGMGISIEKIQKAKTLVEFDHLLTSKLAGCKDAYDYYEKNSSLFHLKKI
HHPTLILTALDDPMMSGRCYPREEVKNNAFLHLETPKYGGHISYASFTKE
YWLEKFVFEKVELFKEEKKEVT



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer