Gene_Locus Report

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Gene_locus Report for: 9gamm-a0a0c3drx1

Halomonas sp. KHS3. Scaffold6.1, whole genome shotgun sequence

Relationship
Family|NFM-deformylase
Block| X
Position in NCBI Life Tree|Halomonas sp. KHS3
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Oceanospirillales: N E > Halomonadaceae: N E > Halomonas: N E > Halomonas sp. KHS3: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : JWHY01000006
1 UniProt : A0A0C3DRX1
1 UniProt : A0A0C3DRX1
1 Interpro : A0A0C3DRX1
1 Pfam : A0A0C3DRX1
1 PIRSF : A0A0C3DRX1
1 SUPERFAM : A0A0C3DRX1
Sequence
Graphical view for this peptide sequence: 9gamm-a0a0c3drx1
Colored MSA for NFM-deformylase (raw)
MNSTYLYGANVHANGIRQHYLRFSDSAETSRQPLVLIPGITSPAITWRFV
AERLGQHFDTYVLDVRGRGLSSTGPELDYATDTCADDVIAFIDALGLSNV
ILAGHSMGARFALRAMSRGAKGIDKLVLIDPPVSGPGRREYPSKLPWYVD
SIRDCTRGADIETMRHYCPTWSDEQLRLRAEWLHTCFEPAIVQAFEEFHS
VDIHQDFPAIKVPTLLMCAGKGGVIQDEDRAEIRALLPTVRISTAEQAGH
MIPWDDFDGFFAAFEDFLGSEL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MNSTYLYGANVHANGIRQHYLRFSDSAETSRQPLVLIPGITSPAITWRFV
AERLGQHFDTYVLDVRGRGLSSTGPELDYATDTCADDVIAFIDALGLSNV
ILAGHSMGARFALRAMSRGAKGIDKLVLIDPPVSGPGRREYPSKLPWYVD
SIRDCTRGADIETMRHYCPTWSDEQLRLRAEWLHTCFEPAIVQAFEEFHS
VDIHQDFPAIKVPTLLMCAGKGGVIQDEDRAEIRALLPTVRISTAEQAGH
MIPWDDFDGFFAAFEDFLGSEL



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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