Gene_locus Report for: 9gamm-a0y831 marine gamma proteobacterium HTCC2143 Putative uncharacterized protein
Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Cellvibrionales: N E > Spongiibacteraceae: N E > unclassified Spongiibacteraceae: N E > BD1-7 clade: N E > marine gamma proteobacterium HTCC2143: N E 6_AlphaBeta_hydrolase :
9gamm-a0y7m1 marine gamma proteobacterium HTCC2143 carboxylesterase (est-3) ,
9gamm-a0y7x6 marine gamma proteobacterium HTCC2143 alpha/beta hydrolase ,
9gamm-a0yab8 marine gamma proteobacterium HTCC2143 3-oxoadipate enol-lactone hydrolase ,
9gamm-a0yad1 marine gamma proteobacterium HTCC2143 Putative hydrolase ,
9gamm-a0ybr8 marine gamma proteobacterium HTCC2143 predicted hydrolase or acyltransferase ,
9gamm-a0ydp1 marine gamma proteobacterium HTCC2143 putative hydrolase ,
9gamm-a0yh06 marine gamma proteobacterium HTCC2143 hydrolase, putative ,
9gamm-a0yhi0 marine gamma proteobacterium HTCC2143 Putative uncharacterized protein ,
9gamm-a0yhx0 marine gamma proteobacterium HTCC2143 Predicted Hydrolase or acyltransferase (Alpha/beta hydrolase superfamily) protein .
A85-EsteraseD-FGH :
9gamm-a0yaw7 marine gamma proteobacterium HTCC2143 Putative esterase .
abh_upf0017 :
9gamm-a0yg58 marine gamma proteobacterium HTCC2143 Predicted hydrolase of the alpha/beta-hydrolase fold protein .
abh_upf00227 :
9gamm-a0y9k1 marine gamma proteobacterium HTCC2143. Uncharacterized protein .
Aclacinomycin-methylesterase_RdmC :
9gamm-a0ycy2 marine gamma proteobacterium HTCC2143 probable hydrolase (fragment) .
AlphaBeta_hydrolase :
9gamm-a0y7n1 marine gamma proteobacterium HTCC2143 Hydrolase, alpha/beta hydrolase fold family protein ,
9gamm-a0yg15 marine gamma proteobacterium HTCC2143 Cysteine proteinase .
Carb_B_Bacteria :
9gamm-a0yar2 marine gamma proteobacterium HTCC2143 putative esterase ,
9gamm-a0yem2 marine gamma proteobacterium HTCC2143 carboxylesterase, type b ,
9gamm-a0yfs7 marine gamma proteobacterium HTCC2143 putative uncharacterized protein ,
9gamm-a0yg00 marine gamma proteobacterium HTCC2143 putative uncharacterized protein ,
9gamm-a0yga3 marine gamma proteobacterium HTCC2143 putative uncharacterized protein ,
9gamm-a0ygu0 marine gamma proteobacterium HTCC2143 putative uncharacterized protein .
Duf_3089 :
9gamm-a0yhi1 marine gamma proteobacterium HTCC2143 Putative uncharacterized protein .
Epoxide_hydrolase :
9gamm-a0y7z1 marine gamma proteobacterium HTCC2143 EphA ,
9gamm-a0y8h0 marine gamma proteobacterium HTCC2143 Alpha/beta hydrolase fold protein ,
9gamm-a0y8i9 marine gamma proteobacterium HTCC2143 Putative uncharacterized protein ,
9gamm-a0yab3 marine gamma proteobacterium HTCC2143 hydrolase, putative ,
9gamm-a0yac9 marine gamma proteobacterium HTCC2143 Putative hydrolase ,
9gamm-a0yft3 marine gamma proteobacterium HTCC2143 Alpha/beta hydrolase fold protein ,
9gamm-a0yfz8 marine gamma proteobacterium HTCC2143 Putative epoxide hydrolase ,
9gamm-a0yh83 marine gamma proteobacterium HTCC2143 Epoxide hydrolase ,
9gamm-a0yhi4 marine gamma proteobacterium HTCC2143 Putative epoxide hydrolase .
Fungal-Bact_LIP :
9gamm-a0ygx1 marine gamma proteobacterium HTCC2143 Secretory lipase family protein .
GTSAGmotif :
9gamm-a0ya83 marine gamma proteobacterium HTCC2143 Esterase .
Haloalkane_dehalogenase-HLD1 :
9gamm-a0ydx7 marine gamma proteobacterium HTCC2143 Haloalkane dehalogenase ,
9gamm-a0yei4 marine gamma proteobacterium HTCC2143 Haloalkane dehalogenase .
Haloperoxidase :
9gamm-a0yd32 marine gamma proteobacterium HTCC2143 putative uncharacterized protein .
Homoserine_transacetylase :
9gamm-a0y9n9 marine gamma proteobacterium HTCC2143 Homoserine O-trans-acetylase .
Hormone-sensitive_lipase_like :
9gamm-a0y7y9 marine gamma proteobacterium HTCC2143. Possible esterase ,
9gamm-a0ybk0 BD1-7 clade marine gamma proteobacterium HTCC2143 Esterase/lipase/thioesterase .
Monoglyceridelipase_lysophospholip :
9gamm-a0y9r5 marine gamma proteobacterium HTCC2143 Lysophospholipase ,
9gamm-a0ygu3 marine gamma proteobacterium HTCC2143 Putative hydrolase .
PHA_synth_III_C :
9gamm-a0y7n9 marine gamma proteobacterium HTCC2143 Probable poly-beta-hydroxybutyrate polymerase .
Proline_iminopeptidase :
9gamm-a0y8t1 marine gamma proteobacterium HTCC2143 Proline iminopeptidase ,
9gamm-a0yai7 marine gamma proteobacterium HTCC2143. Alpha/beta hydrolase fold protein Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: 9gamm-a0y831 Colored MSA for Duf_3530 (raw)
MTKTILTLLSLLCIPALSLAQGTGQDTGKESLFDQQVAEQEKVWLNVGEQ
QQLAFYLTESSGTAYGGVLLIPDIAKHPATLGSINTMRIALSKHHWSTLA
LNMGGANEAQSLDLIAAGIQFFNEKEIYNIAILGEGRGAAHAILYLASKP
PTDANSAKTDRISALIMVDAHNSTSDNEAHILQKLAEVAIPVLDAFSNGD
YIEQRQADKRKDTARETLNKTYHQVRLPQASGEQQNGDNRVTKRIRGWLD
KNIANLTAPLI
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M T K T I L T L L S L L C I P A L S L A Q G T G Q D T G K E S L F D Q Q V A E Q E K V W L N V G E Q Q Q L A F Y L T E S S G T A Y G G V L L I P D I A K H P A T L G S I N T M R I A L S K H H W S T L A L N M G G A N E A Q S L D L I A A G I Q F F N E K E I Y N I A I L G E G R G A A H A I L Y L A S K P P T D A N S A K T D R I S A L I M V D A H N S T S D N E A H I L Q K L A E V A I P V L D A F S N G D Y I E Q R Q A D K R K D T A R E T L N K T Y H Q V R L P Q A S G E Q Q N G D N R V T K R I R G W L D K N I A N L T A P L I
Reference
Title: Genome sequence of the oligotrophic marine Gammaproteobacterium HTCC2143, isolated from the Oregon CoastOh HM , Kang I , Ferriera S , Giovannoni SJ , Cho JC Ref: Journal of Bacteriology, 192 :4530, 2010 : PubMed Abstract ESTHER: Oh_2010_J.Bacteriol_192_4530 PubMedSearch: Oh 2010 J.Bacteriol 192 4530 PubMedID: 20601481 Gene_locus related to this paper: 9gamm-a0y7n1 ,
9gamm-a0y7n9 ,
9gamm-a0y7z1 ,
9gamm-a0y8h0 ,
9gamm-a0y8i9 ,
9gamm-a0y8t1 ,
9gamm-a0y9n9 ,
9gamm-a0y9r5 ,
9gamm-a0y831 ,
9gamm-a0yac9 ,
9gamm-a0yad1 ,
9gamm-a0yaw7 ,
9gamm-a0ydx7 ,
9gamm-a0yei4 ,
9gamm-a0yft3 ,
9gamm-a0yfz8 ,
9gamm-a0yg15 ,
9gamm-a0yg58 ,
9gamm-a0ygu3 ,
9gamm-a0ygx1 ,
9gamm-a0yh83 ,
9gamm-a0yhi0 ,
9gamm-a0yhi1 ,
9gamm-a0yhi4 ,
9gamm-a0yhx0 ,
9gamm-a0ya83 ,
9gamm-a0yai7 ,
9gamm-a0y9k1 ,
9gamm-a0y7y9 Abstract
Strain HTCC2143 was isolated from Oregon Coast surface waters using dilution-to-extinction culturing. Here we present the genome of strain HTCC2143 from the BD1-7 clade of the oligotrophic marine Gammaproteobacteria group. The genome of HTCC2143 contains genes for carotenoid biosynthesis and proteorhodopsin and for proteins that have potential biotechnological significance: epoxide hydrolases, Baeyer-Villiger monooxygenases, and polyketide synthases.
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