Gene_Locus Report

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Gene_locus Report for: 9gamm-l9ud02

Halomonas titanicae BH1. Alpha/beta hydrolase fold-1

Relationship
Family|NFM-deformylase
Block| X
Position in NCBI Life Tree|Halomonas titanicae BH1
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Oceanospirillales: N E > Halomonadaceae: N E > Halomonas: N E > Halomonas titanicae: N E > Halomonas titanicae BH1: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AOPO01000001
1 UniProt : L9UD02
1 UniProt : L9UD02
1 Interpro : L9UD02
1 Pfam : L9UD02
1 PIRSF : L9UD02
1 SUPERFAM : L9UD02
Sequence
Graphical view for this peptide sequence: 9gamm-l9ud02
Colored MSA for NFM-deformylase (raw)
MSSIYLYGANVHANGIRQHYLRFADSAETSRQPLVLIPGITSPAITWRFV
AERLGQHFDTYVLDVRGRGLSSTGPELDYDTDTCADDVIAFIDALGLSNV
ILAGHSMGARFALRAMSRGAKGIDKLVLIDPPVSGPGRREYPSKLPWYVD
SIRDCTRGADIETMRHYCPTWSDEQLRLRAEWLHTCFEPAIVQAFEEFHS
VDIHQDFPAIKVPTLLMCAGKGGVIQDEDRAEIRALLPTVRISTAEQAGH
MIPWDDFDGFFAAFEDFLCSEL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSSIYLYGANVHANGIRQHYLRFADSAETSRQPLVLIPGITSPAITWRFV
AERLGQHFDTYVLDVRGRGLSSTGPELDYDTDTCADDVIAFIDALGLSNV
ILAGHSMGARFALRAMSRGAKGIDKLVLIDPPVSGPGRREYPSKLPWYVD
SIRDCTRGADIETMRHYCPTWSDEQLRLRAEWLHTCFEPAIVQAFEEFHS
VDIHQDFPAIKVPTLLMCAGKGGVIQDEDRAEIRALLPTVRISTAEQAGH
MIPWDDFDGFFAAFEDFLCSEL


Reference
    Title: Draft Genome of the Marine Gammaproteobacterium Halomonas titanicae
    Sanchez-Porro C, de la Haba RR, Cruz-Hernandez N, Gonzalez JM, Reyes-Guirao C, Navarro-Sampedro L, Carballo M, Ventosa A
    Ref: Genome Announc, 1:e0008313, 2013 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
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