Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9gamm-q34zq5

Alkalilimnicola ehrlichei MLHE-1 poly(3-hydroxyalkanoate) polymerase family protein

Comment
Other strains:Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1)


Relationship
Family|PhaC_cen_dom
Block| X
Position in NCBI Life Tree|Alkalilimnicola ehrlichei MLHE-1
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Chromatiales: N E > Ectothiorhodospiraceae: N E > Alkalilimnicola: N E > Alkalilimnicola ehrlichii: N E > Alkalilimnicola ehrlichii MLHE-1: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : AALK01000005, WP_011630113, ABI57720
1 UniProt : Q0A617
1 Interpro : Q0A617
1 Pfam : Q0A617
1 PIRSF : Q0A617
1 SUPERFAM : Q0A617
Sequence
Graphical view for this peptide sequence: 9gamm-q34zq5
Colored MSA for PhaC_cen_dom (raw)
MTHDKVERVDTGRGAHPIDRLLHAGMGRVTGGLSPASLGLAYVDWAIHMG
ISPGRQTELVEKAWRKATRLSLYAMRCAANGAERHPPCIEPLPQDTRFNA
SQWQRWPFNVWYQGFLLTQQWWHVATTDIRGVETHHEDVVNFLGRQILDI
YSPSNYFWTNPELMETTAKEGGANLYRGLRNWWDDTARRIQGEPPAGMEK
WKVGENLALTPGKVVYSNRLIELIQYEPATDRVHPEPVLIVPAWIMKYYI
LDLRPGKSLVEYLVNQGHTVFMMSWKNPSADDSDLGMEDYRKMGIMDALK
AVNTIVPEQKVHAAGYCLGGTLLMLAAAAMAREGDDRLASLTCFAAQCDF
TEPGELDLFIDDSQVTFLEDMMWHAGYLSSDQMAGAFQLLRSKDLIWSRM
VREYLMGERSEMIDLMAWNADTTRLPYRMHSEYLRQLFLNNDFVEERYDV
DGQPIHLWDVRTPIFAVGTTKDHIAPWKSVYKINRLARTDVTFALTTGGH
NAGIVTPPGHPRRTYQVHCRKVQDPYLAPDDFLAEVPSKQGSWWPEWHRW
LARHSGNKGKPPQMGADVRGYRPQRNAPGKYVLMD
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTHDKVERVDTGRGAHPIDRLLHAGMGRVTGGLSPASLGLAYVDWAIHMG
ISPGRQTELVEKAWRKATRLSLYAMRCAANGAERHPPCIEPLPQDTRFNA
SQWQRWPFNVWYQGFLLTQQWWHVATTDIRGVETHHEDVVNFLGRQILDI
YSPSNYFWTNPELMETTAKEGGANLYRGLRNWWDDTARRIQGEPPAGMEK
WKVGENLALTPGKVVYSNRLIELIQYEPATDRVHPEPVLIVPAWIMKYYI
LDLRPGKSLVEYLVNQGHTVFMMSWKNPSADDSDLGMEDYRKMGIMDALK
AVNTIVPEQKVHAAGYCLGGTLLMLAAAAMAREGDDRLASLTCFAAQCDF
TEPGELDLFIDDSQVTFLEDMMWHAGYLSSDQMAGAFQLLRSKDLIWSRM
VREYLMGERSEMIDLMAWNADTTRLPYRMHSEYLRQLFLNNDFVEERYDV
DGQPIHLWDVRTPIFAVGTTKDHIAPWKSVYKINRLARTDVTFALTTGGH
NAGIVTPPGHPRRTYQVHCRKVQDPYLAPDDFLAEVPSKQGSWWPEWHRW
LARHSGNKGKPPQMGADVRGYRPQRNAPGKYVLMD



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer