Gene_Locus Report

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Gene_locus Report for: 9mico-u2xbp1

Microbacterium sp. TS-1 Carboxylesterase type B

Relationship
Family|Carb_B_Bacteria
Block| C
Position in NCBI Life Tree|Microbacterium sp. TS-1
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Micrococcales: N E > Microbacteriaceae: N E > Microbacterium: N E > Microbacterium sp. TS-1: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : BASQ01000002
1 UniProt : U2XBP1
1 UniProt : U2XBP1
1 Interpro : U2XBP1
1 Prodom : U2XBP1
1 Pfam : U2XBP1
1 PIRSF : U2XBP1
1 SUPERFAM : U2XBP1
Sequence
Graphical view for this peptide sequence: 9mico-u2xbp1
Colored MSA for Carb_B_Bacteria (raw)
MPEEVVSDEARVSISGGELRGSRLNGVDRYLGIPYAKPPVGERRFRVAEP
VDPWDGERDATRFGPTAPQTPYPGDLGELLTVPTIEGDDILTVNVWAPVG
AADAPVVLWLHGGALERGAAAQTIYDGTTFARDGIVFVSANYRLGVEGFS
VLDGVPRNLGLRDAAAALRWVSDEIRAFGGDPARITLMGESAGGALVAAL
VSEPRSRALVAGAIIQSGPLEAAEPDKARRASDAIARELGIPTTREAFAA
TSTADLLSARSRASAGSSPLRGAPGFVLALDEESLPEVPEDALTSADLPI
MIGTNTDEYRLWLTPDAIARIGRLKAWVARRAMGVSERAARAVARSFPGA
SPGEVLGQLLTDRMLRAPATRVARARTAPTFVYEFAWRSPVRGLDAAHAL
EIGFAFDRLGDPEALLLAGSDAPADLARDMHAAWVAFIRGGDPGWPRFSP
SRTTRIWDAAPRDLPQRRVEVIDALS
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPEEVVSDEARVSISGGELRGSRLNGVDRYLGIPYAKPPVGERRFRVAEP
VDPWDGERDATRFGPTAPQTPYPGDLGELLTVPTIEGDDILTVNVWAPVG
AADAPVVLWLHGGALERGAAAQTIYDGTTFARDGIVFVSANYRLGVEGFS
VLDGVPRNLGLRDAAAALRWVSDEIRAFGGDPARITLMGESAGGALVAAL
VSEPRSRALVAGAIIQSGPLEAAEPDKARRASDAIARELGIPTTREAFAA
TSTADLLSARSRASAGSSPLRGAPGFVLALDEESLPEVPEDALTSADLPI
MIGTNTDEYRLWLTPDAIARIGRLKAWVARRAMGVSERAARAVARSFPGA
SPGEVLGQLLTDRMLRAPATRVARARTAPTFVYEFAWRSPVRGLDAAHAL
EIGFAFDRLGDPEALLLAGSDAPADLARDMHAAWVAFIRGGDPGWPRFSP
SRTTRIWDAAPRDLPQRRVEVIDALS


Reference
    Title: Draft Genome Sequence of Sodium-Independent Alkaliphilic Microbacterium sp. Strain TS-1
    Fujinami S, Takeda K, Onodera T, Satoh K, Sano M, Narumi I, Ito M
    Ref: Genome Announc, 1:, 2013 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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