Gene_Locus Report

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Gene_locus Report for: 9poal-a0a2s3hsq2

Panicum hallii. Uncharacterized protein

Relationship
Family|UCP031088
Block| X
Position in NCBI Life Tree|Panicum hallii
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > Liliopsida: N E > Petrosaviidae: N E > commelinids: N E > Poales: N E > Poaceae: N E > PACMAD clade: N E > Panicoideae: N E > Panicodae: N E > Paniceae: N E > Panicinae: N E > Panicum: N E > Panicum sect. Panicum: N E > Panicum hallii: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: 9poal-a0a2s3hsq2
Colored MSA for UCP031088 (raw)
MRLRHASDLRAFLAAAAVAHLSSSPASRASPCAPPPLPAPRLRAFASSRV
STPPSSPSPSPSPAGAVASAGASAAAAAAACEQGAAKPAICTADELHYAP
VPGTEWRLALWRYRPPPEAPKRNHPLMLLSGVATNAVGFDLSPGASFARH
MSMQGFDTWIVEVRGAGLSMRGSELAAANTKSDMPPDSSLDESSTAKANV
VVPAKNMSTSDPQISEVPVIADKNMVGTSASEEPQLVIKLSNTLVGLGET
FSSYVKDSRLKNIVDSFFDRVSELAPDASLASLEEISEKILGLLELPQTS
VISNQISNLSQRLVKILGEGQQTVSPRLFGWQERLSATIEDLQKQLELII
SYDWDFDHYLEEDVPAAMDYIRKQSVPKDGKLLAIGHSMGGILLYAMVSK
CGFEGAEPELAAIVTLASSVDYTTSNSSLKMLLPLADPAEMLRVPAIPLG
ALLSTTYPISSRAPYILSLLRSQISAKEMMDPELLSKLILNNFCTVPAKV
LLQLTTAFRDGGLCNRNGTFFFKEHLHKIKVPVLALAGDEDLICPPEAVY
ETVKLIPQHLVTYKVFGAPEGPHYAHYDLVGGRKAVHEVYPCIIEFLSQH
DKVSS
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRLRHASDLRAFLAAAAVAHLSSSPASRASPCAPPPLPAPRLRAFASSRV
STPPSSPSPSPSPAGAVASAGASAAAAAAACEQGAAKPAICTADELHYAP
VPGTEWRLALWRYRPPPEAPKRNHPLMLLSGVATNAVGFDLSPGASFARH
MSMQGFDTWIVEVRGAGLSMRGSELAAANTKSDMPPDSSLDESSTAKANV
VVPAKNMSTSDPQISEVPVIADKNMVGTSASEEPQLVIKLSNTLVGLGET
FSSYVKDSRLKNIVDSFFDRVSELAPDASLASLEEISEKILGLLELPQTS
VISNQISNLSQRLVKILGEGQQTVSPRLFGWQERLSATIEDLQKQLELII
SYDWDFDHYLEEDVPAAMDYIRKQSVPKDGKLLAIGHSMGGILLYAMVSK
CGFEGAEPELAAIVTLASSVDYTTSNSSLKMLLPLADPAEMLRVPAIPLG
ALLSTTYPISSRAPYILSLLRSQISAKEMMDPELLSKLILNNFCTVPAKV
LLQLTTAFRDGGLCNRNGTFFFKEHLHKIKVPVLALAGDEDLICPPEAVY
ETVKLIPQHLVTYKVFGAPEGPHYAHYDLVGGRKAVHEVYPCIIEFLSQH
DKVSS



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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