Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9psed-a0a0c2rd33

Pseudomonas sp. Uncharacterized protein

Relationship
Family|BD-FAE
Block| H
Position in NCBI Life Tree|Pseudomonas sp.
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Pseudomonadales: N E > Pseudomonadaceae: N E > Pseudomonas: N E > Pseudomonas sp.: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : WP_041068070.1
1 UniProt : A0A0C2RD33
1 Interpro : A0A0C2RD33
1 Pfam : A0A0C2RD33
1 PIRSF : A0A0C2RD33
1 SUPERFAM : A0A0C2RD33
Sequence
Graphical view for this peptide sequence: 9psed-a0a0c2rd33
Colored MSA for BD-FAE (raw)
MTNPLWQRFGSILGGCLLLMLSGCSPVKVLNALTPDDTFQRTAGIAYGED
PRQKLDVYVPHQPLEGAPVVVFFYGGSWNSGDRGDYAFVGEALASRGIVA
VLADYRLYPQVRYPLFLEDSARAVAWTRAHIREFSGNPQRLFLMGHSSGA
YNAAMLALDPALLGAVGMSSKDLSGWIGLAGPYDFLPIKNAAVRPVFFWP
DSPPQSQPINHVRQGEPPALLIAATKDNLVNPTRNTAGLARKLREAGVPV
QDLYYSRPSHVTLVASLSRPLRRLAPVLEQVVAFVKHTPVQ
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTNPLWQRFGSILGGCLLLMLSGCSPVKVLNALTPDDTFQRTAGIAYGED
PRQKLDVYVPHQPLEGAPVVVFFYGGSWNSGDRGDYAFVGEALASRGIVA
VLADYRLYPQVRYPLFLEDSARAVAWTRAHIREFSGNPQRLFLMGHSSGA
YNAAMLALDPALLGAVGMSSKDLSGWIGLAGPYDFLPIKNAAVRPVFFWP
DSPPQSQPINHVRQGEPPALLIAATKDNLVNPTRNTAGLARKLREAGVPV
QDLYYSRPSHVTLVASLSRPLRRLAPVLEQVVAFVKHTPVQ



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer