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Gene_locus Report for: 9pseu-DathA

Amycolatopsis thermoflava Haloalkane dehalogenase HLD2 DathA

Relationship
Family|Haloalkane_dehalogenase-HLD2
Block| X
Position in NCBI Life Tree|Amycolatopsis thermoflava
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Pseudonocardiales: N E > Pseudonocardiaceae: N E > Amycolatopsis: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : WP_027934580
Sequence
Graphical view for this peptide sequence: 9pseu-DathA
Colored MSA for Haloalkane_dehalogenase-HLD2 (raw)
MILHHRETGDGQPIVFLHGNPASSHLWRHIMPAAGPGRKLAPDLIGMGES
AKPDIGYTFDDHARYLDAWFEHVGLDDVVLVGHDWGGALAFDWAARHPGR
VRGIAVTETIVKPMSWEEFPPAGAEIFRALKTPGLGEKMMLDDNIFLESM
ALGEEDRAAYLRPYPTRESRVPLLRWARSMPLGGEPADVVARVEHYDKWL
AASGDVPKLLMTFRPGFDTMMDDRMIAWCAENFAALDIVHHDLPAGHHTP
EDQPVAMAATLSAWLDRHGLR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MILHHRETGDGQPIVFLHGNPASSHLWRHIMPAAGPGRKLAPDLIGMGES
AKPDIGYTFDDHARYLDAWFEHVGLDDVVLVGHDWGGALAFDWAARHPGR
VRGIAVTETIVKPMSWEEFPPAGAEIFRALKTPGLGEKMMLDDNIFLESM
ALGEEDRAAYLRPYPTRESRVPLLRWARSMPLGGEPADVVARVEHYDKWL
AASGDVPKLLMTFRPGFDTMMDDRMIAWCAENFAALDIVHHDLPAGHHTP
EDQPVAMAATLSAWLDRHGLR


Reference
    Title: Functional and Mechanistic Characterization of an Enzyme Family Combining Bioinformatics and High-Throughput Microfluidics
    Vasina M, Vanacek P, Hon J, Kovar D, Faldynova H, Kunka A, Badenhorst C, Buryska T, Mazurenko S and Prokop Z <5 more author(s)>
    Ref: ResearchSquare, :, 2021 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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