Gene_Locus Report

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Gene_locus Report for: 9pseu-a0a1h4sqd2

Amycolatopsis tolypomycina. Poly(3-hydroxybutyrate) depolymerase

Comment
c-term Ricin_B_lectin excluded


Relationship
Family|FaeC
Block| X
Position in NCBI Life Tree|Amycolatopsis tolypomycina
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Actinobacteria [phylum]: N E > Actinobacteria [class]: N E > Pseudonocardiales: N E > Pseudonocardiaceae: N E > Amycolatopsis: N E > Amycolatopsis tolypomycina: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : FNSO01000004
1 UniProt : A0A1H4SQD2
1 UniProt : A0A1H4SQD2
1 Interpro : A0A1H4SQD2
1 Prodom : A0A1H4SQD2
1 Pfam : A0A1H4SQD2
1 PIRSF : A0A1H4SQD2
1 SUPERFAM : A0A1H4SQD2
Sequence
Graphical view for this peptide sequence: 9pseu-a0a1h4sqd2
Colored MSA for FaeC (raw)
MRFTTHDPAPGRRRRRWPVVLAALLTAATLQTAAGPPASAAVASTTAASA
GCGKAPALATGNHTISSSGKSRNYIITIPANYDRNRSYRLVFGLHWRGGN
ATDVATGRTVLTDVWAYYGLRRLAGDSTIFVAPQGIDNGWANSGGQDVTF
VDDMLRQIQNGLCIDTTRIFSVGFSYGAGMSYALACARANVFRAVALYSA
GQLSGCSGGTQPIAYLAAHGIGDGVLNIGGGRSLRDRFVRNNQCTPQSPR
EPAKGSRTHIATTYAGCSAGHPVEWVAYDGGHDASPADGANATAPAPVKG
RTTWLPAETWKFFTQF
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRFTTHDPAPGRRRRRWPVVLAALLTAATLQTAAGPPASAAVASTTAASA
GCGKAPALATGNHTISSSGKSRNYIITIPANYDRNRSYRLVFGLHWRGGN
ATDVATGRTVLTDVWAYYGLRRLAGDSTIFVAPQGIDNGWANSGGQDVTF
VDDMLRQIQNGLCIDTTRIFSVGFSYGAGMSYALACARANVFRAVALYSA
GQLSGCSGGTQPIAYLAAHGIGDGVLNIGGGRSLRDRFVRNNQCTPQSPR
EPAKGSRTHIATTYAGCSAGHPVEWVAYDGGHDASPADGANATAPAPVKG
RTTWLPAETWKFFTQF



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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