Gene_Locus Report

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Gene_locus Report for: 9rhiz-a0a1e4fd43

Pelagibacterium sp. SCN 63-23. Alpha/beta hydrolase

Relationship
Family|Atu1826-like
Block| X
Position in NCBI Life Tree|Pelagibacterium sp. SCN 63-23
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Rhizobiales: N E > Hyphomicrobiaceae: N E > Pelagibacterium: N E > Pelagibacterium sp. SCN 63-23: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : MEEU01000027
1 UniProt : A0A1E4FD43
1 UniProt : A0A1E4FD43
1 Interpro : A0A1E4FD43
1 Pfam : A0A1E4FD43
1 PIRSF : A0A1E4FD43
1 SUPERFAM : A0A1E4FD43
Sequence
Graphical view for this peptide sequence: 9rhiz-a0a1e4fd43
Colored MSA for Atu1826-like (raw)
MPEVIFNGPEGRLEGRYQPGKEPNAPIAIVLHPHPQFGGTMNNQIVYNLF
YMFAERGFSVLRFNSRGVGRSQGVFDHGIGELSDAAAALDWLQLINRESR
GCWIAGFSFGAWIGMQLLMRRPEVEGFISVAPPENLYDFSFLAPCPSSGL
IIHGDKDRVAPPSSVQKLVDKLKTQKGITIEQQILDGANHFFEGKVDELT
ASCAEYLDRRRQEIADGGGR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPEVIFNGPEGRLEGRYQPGKEPNAPIAIVLHPHPQFGGTMNNQIVYNLF
YMFAERGFSVLRFNSRGVGRSQGVFDHGIGELSDAAAALDWLQLINRESR
GCWIAGFSFGAWIGMQLLMRRPEVEGFISVAPPENLYDFSFLAPCPSSGL
IIHGDKDRVAPPSSVQKLVDKLKTQKGITIEQQILDGANHFFEGKVDELT
ASCAEYLDRRRQEIADGGGR


Reference
    Title: Bioreactor microbial ecosystems for thiocyanate and cyanide degradation unravelled with genome-resolved metagenomics
    Kantor RS, van Zyl AW, van Hille RP, Thomas BC, Harrison ST, Banfield JF
    Ref: Environ Microbiol, 17:4929, 2015 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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