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Gene_locus Report for: 9rhob-a3u297

Oceanicola batsensis HTCC2597 Esterase EstC, putative

Relationship
Family|HNLyase_Bact
Block| X
Position in NCBI Life Tree|Oceanicola batsensis HTCC2597
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Rhodobacterales: N E > Rhodobacteraceae: N E > Pseudooceanicola: N E > Pseudooceanicola batsensis: N E > Pseudooceanicola batsensis HTCC2597: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AAMO01000011
1 UniProt : A3U297
1 UniProt : A3U297
1 Interpro : A3U297
1 Pfam : A3U297
1 PIRSF : A3U297
1 SUPERFAM : A3U297
Sequence
Peptide
Graphical view for this peptide sequence: 9rhob-a3u297
Colored MSA for HNLyase_Bact (raw) 
MAQFILVHGACHGAWCWRDVIPALESRGHAVRAVDMPGRGGGVAGLTLKD
QAEAILSAYEGQAVLVGHSAGGFSISAAAEQAPERVSRLIYVAALRPANG
DRLGQRMQALTGERADLPLVVAKDRLSYCFDTEGAGPVLYNGASQADMDW
ALPQIRHEPSGPHREAISLGDNHAGVPASFVICTEDRMIPAVDQERMAAD
LTDVVRMETGHSPFLSDPDRLAGHLARMAC
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
MAQFILVHGACHGAWCWRDVIPALESRGHAVRAVDMPGRGGGVAGLTLKD
QAEAILSAYEGQAVLVGHSAGGFSISAAAEQAPERVSRLIYVAALRPANG
DRLGQRMQALTGERADLPLVVAKDRLSYCFDTEGAGPVLYNGASQADMDW
ALPQIRHEPSGPHREAISLGDNHAGVPASFVICTEDRMIPAVDQERMAAD
LTDVVRMETGHSPFLSDPDRLAGHLARMAC

Reference
    Title: Genome sequences of Oceanicola granulosus HTCC2516(T) and Oceanicola batsensis HTCC2597(TDelta)
    Thrash JC, Cho JC, Vergin KL, Giovannoni SJ
    Ref: Journal of Bacteriology, 192:3549, 2010 : PubMed

            


Other Papers

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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