Gene_Locus Report
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Gene_locus Report for: 9sphn-q1n750

Sphingomonas sp.; Sphingobium lactosutens, carboxylesterase, type b

Comment
Other strains: Sphingomonas sp. SKA58; Sphingobium lactosutens DS20


Relationship
Family|Carb_B_Bacteria
Block| C
Position in NCBI Life Tree|Sphingomonas sp. SKA58
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Sphingomonadales: N E > Sphingomonadaceae: N E > Sphingomonas: N E > Sphingomonas sp. SKA58: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AAQG01000034, ATDP01000098
2 UniProt : Q1N750, T0H9Y8
2 UniProt : Q1N750, T0H9Y8
2 Interpro : Q1N750, T0H9Y8
2 Pfam : Q1N750, T0H9Y8
2 PIRSF : Q1N750, T0H9Y8
2 SUPERFAM : Q1N750, T0H9Y8
Sequence
Peptide
Graphical view for this peptide sequence: 9sphn-q1n750
Colored MSA for Carb_B_Bacteria (raw) 
MTQPKGFFAAMLGVAMVMPAHADAAAPAASVATTEYGKVQGSIVDGVESW
KGIPFAAPPVDALRWQPPKPAARWSGVRETTAYRNDCMQEPFPSDAAPLG
TTPSEDCLYLNIWKPAGAAGKLPVMVWIYGGGFVNGGSSPPTYSGAPIAS
QGVMVVSFNYRLGRFGTFRHPALGKDQGVNYGLLDQIAALKWVQRNIAGF
GGDPDQVTIVGESAGGRSVHALMTTPLAKGLFDRAVIMSGGDGKPGALST
PADAERLAAAFGQSQGIAPDAPDAAAKLRALPARAVVGDLNLAKMENFFS
PVTDGRSGVDVIAAHESGRAPVIPVMIGATSADIGGPDGPMVAGARDLAA
RFAGRGMPTYAYRFSYVASSVGGTNAYHATDIPFFFDTQAIKYGAATTPR
DNHMGDIMSGYLANFVKSGDPNGADLPQWPRYRADGGKQMDFATSGEAVV
E
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA
MTQPKGFFAAMLGVAMVMPAHADAAAPAASVATTEYGKVQGSIVDGVESW
KGIPFAAPPVDALRWQPPKPAARWSGVRETTAYRNDCMQEPFPSDAAPLG
TTPSEDCLYLNIWKPAGAAGKLPVMVWIYGGGFVNGGSSPPTYSGAPIAS
QGVMVVSFNYRLGRFGTFRHPALGKDQGVNYGLLDQIAALKWVQRNIAGF
GGDPDQVTIVGESAGGRSVHALMTTPLAKGLFDRAVIMSGGDGKPGALST
PADAERLAAAFGQSQGIAPDAPDAAAKLRALPARAVVGDLNLAKMENFFS
PVTDGRSGVDVIAAHESGRAPVIPVMIGATSADIGGPDGPMVAGARDLAA
RFAGRGMPTYAYRFSYVASSVGGTNAYHATDIPFFFDTQAIKYGAATTPR
DNHMGDIMSGYLANFVKSGDPNGADLPQWPRYRADGGKQMDFATSGEAVV
E

Reference
    Title: Draft Genome Sequence of Sphingobium lactosutens Strain DS20T, Isolated from a Hexachlorocyclohexane Dumpsite
    Kumar R, Dwivedi V, Negi V, Khurana JP, Lal R
    Ref: Genome Announc, 1:, 2013 : PubMed

            


Other Papers

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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