Gene_Locus Report

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Gene_locus Report for: 9sphn-q1ndz5

Sphingomonas sp. SKA58 Poly-beta-hydroxybutyrate polymerase

Relationship
Family|PHA_synth_III_C
Block| X
Position in NCBI Life Tree|Sphingomonas sp. SKA58
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Sphingomonadales: N E > Sphingomonadaceae: N E > Sphingomonas: N E > Sphingomonas sp. SKA58: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AAQG01000005
1 UniProt : Q1NDZ5
1 UniProt : Q1NDZ5
1 Interpro : Q1NDZ5
1 Pfam : Q1NDZ5
1 PIRSF : Q1NDZ5
1 SUPERFAM : Q1NDZ5
Sequence
Graphical view for this peptide sequence: 9sphn-q1ndz5
Colored MSA for PHA_synth_III_C (raw)
MPLFLNILWRETEGDPDLRKRALAGLRKYQNADRPPVRNAGRPVAHAGSA
RLLQYGAQSDRFPVVFIPSLINPPHVLDLSERRSLLRHMVAAGHDAYLVD
WGAPDGADASLGLDGHVTERLLPLLAALPRPPILVGYCLGGSLALGAAAL
VPTAAVATIAAPWRFSHFPAADLELIASLWSGAKAMCQRIGYVPMEVLQS
GFWAMDPARTIRKFADFADAESASDAEQAFLAVEDWANEGPPLTYAAGRD
LFESFYAGDAPGRGQWRIGHMTVDPQALTCPTLSIRSTTDRIVPAAASPH
LREARSLSLGHVGMVVGSRAPELLWQPLSHWLSSHGG
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPLFLNILWRETEGDPDLRKRALAGLRKYQNADRPPVRNAGRPVAHAGSA
RLLQYGAQSDRFPVVFIPSLINPPHVLDLSERRSLLRHMVAAGHDAYLVD
WGAPDGADASLGLDGHVTERLLPLLAALPRPPILVGYCLGGSLALGAAAL
VPTAAVATIAAPWRFSHFPAADLELIASLWSGAKAMCQRIGYVPMEVLQS
GFWAMDPARTIRKFADFADAESASDAEQAFLAVEDWANEGPPLTYAAGRD
LFESFYAGDAPGRGQWRIGHMTVDPQALTCPTLSIRSTTDRIVPAAASPH
LREARSLSLGHVGMVVGSRAPELLWQPLSHWLSSHGG



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
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