Gene_Locus Report

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Gene_locus Report for: 9sphn-q3vh72

Sphingopyxis alaskensis RB2256 alpha/beta hydrolase fold

Comment
Other strains: Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) (Sphingomonas alaskensis)


Relationship
Family|AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Sphingopyxis alaskensis RB2256
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Sphingomonadales: N E > Sphingomonadaceae: N E > Sphingopyxis: N E > Sphingopyxis alaskensis: N E > Sphingopyxis alaskensis RB2256: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : AAIP01000001, WP_011542233, ABF53657
1 UniProt : Q1GRR5
1 Interpro : Q1GRR5
1 Pfam : Q1GRR5
1 PIRSF : Q1GRR5
1 SUPERFAM : Q1GRR5
Sequence
Graphical view for this peptide sequence: 9sphn-q3vh72
Colored MSA for AlphaBeta_hydrolase (raw)
MIADDDLDFDPPPPPRRPFFRRKRVLIPLAVLAALVIGFLLLLTPDTDRE
AMIAKYGGPDAAFAAGPAGQRIHYRDQGRRDGPAIMLLHGSNASLHTWEP
LVERLGADYRIVTLDLPGHGLTGAIPGRDYDADAMMEAVDVVAAKLGLHH
FVLGGNSMGGWIAWRYALAHPARVDALLLIDAAGMPLRRGEKAPESNVGF
RVLEYPFGRWLATRITPRMLVEQSLLGSVERQDIVDAAMIDRYWELLRFP
GNREATVIRARASREPEMAARVGEITAPTLILFGDKDRIINPSAAKTFNE
RIAGSEVVLLPGIGHLPMEEAPDQVATAIADFLTRRLAAAAAPERR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MIADDDLDFDPPPPPRRPFFRRKRVLIPLAVLAALVIGFLLLLTPDTDRE
AMIAKYGGPDAAFAAGPAGQRIHYRDQGRRDGPAIMLLHGSNASLHTWEP
LVERLGADYRIVTLDLPGHGLTGAIPGRDYDADAMMEAVDVVAAKLGLHH
FVLGGNSMGGWIAWRYALAHPARVDALLLIDAAGMPLRRGEKAPESNVGF
RVLEYPFGRWLATRITPRMLVEQSLLGSVERQDIVDAAMIDRYWELLRFP
GNREATVIRARASREPEMAARVGEITAPTLILFGDKDRIINPSAAKTFNE
RIAGSEVVLLPGIGHLPMEEAPDQVATAIADFLTRRLAAAAAPERR



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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