Gene_Locus Report

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Gene_locus Report for: 9zzzz-g3crf5

uncultured organism. Putative uncharacterized protein

Relationship
Family|Hormone-sensitive_lipase_like
Block| H
Position in NCBI Life Tree|uncultured organism
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> unclassified sequences: N E > environmental samples: N E > uncultured organism: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : HQ156929, AEM45138
1 UniProt : G3CRF5
1 UniProt : G3CRF5
1 Interpro : G3CRF5
1 Pfam : G3CRF5
1 PIRSF : G3CRF5
1 SUPERFAM : G3CRF5
Sequence
Graphical view for this peptide sequence: 9zzzz-g3crf5
Colored MSA for Hormone-sensitive_lipase_like (raw)
MTTSTHNIGAQPLLPGRLGNPDRVLKTDPRADPRLVAACAPFALDAAPPP
IPVHAGSPWQAKLDYVAASEAGMEGVFAELFADLPPITNVERRTEVIRGV
DGNDIRLYIHTPKNASGPLPCVYHIHGGGMVMLTAAGATYARWRDELAAL
GLVALGVEFRNGGGTLGNHPFPAGLNDCMSGLQWTFDHKATLKISKIIVS
GESGGGNLTLATCLKAKKDGKLAQIDGVYALCPYIYGAWAQKGKELPSLY
ENDGYLIACDQMAVLATIYDPENKNNRNPLCWPYNATRVDLQGLPPHVIS
VNELDPLRDEGLKYYQMLLAAGVRVYSRTVNGTCHAGDVLFRKAIPDVYA
ATIRDIKGFADAL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTTSTHNIGAQPLLPGRLGNPDRVLKTDPRADPRLVAACAPFALDAAPPP
IPVHAGSPWQAKLDYVAASEAGMEGVFAELFADLPPITNVERRTEVIRGV
DGNDIRLYIHTPKNASGPLPCVYHIHGGGMVMLTAAGATYARWRDELAAL
GLVALGVEFRNGGGTLGNHPFPAGLNDCMSGLQWTFDHKATLKISKIIVS
GESGGGNLTLATCLKAKKDGKLAQIDGVYALCPYIYGAWAQKGKELPSLY
ENDGYLIACDQMAVLATIYDPENKNNRNPLCWPYNATRVDLQGLPPHVIS
VNELDPLRDEGLKYYQMLLAAGVRVYSRTVNGTCHAGDVLFRKAIPDVYA
ATIRDIKGFADAL


Reference
    Title: Identification of novel lipolytic genes and gene families by screening of metagenomic libraries derived from soil samples of the German Biodiversity Exploratories
    Nacke H, Will C, Herzog S, Nowka B, Engelhaupt M, Daniel R
    Ref: FEMS Microbiol Ecol, 78:188, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
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