Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9zzzz-q335p5

uncultured prokaryote; Alcanivorax sp. ester hydrolase (EC 3.1.1.1)

Comment
Other strain: uncultured prokaryote; Alcanivorax sp.


Relationship
Family|Carb_B_Bacteria
Block| C
Position in NCBI Life Tree|uncultured prokaryote
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> unclassified sequences: N E > environmental samples: N E > prokaryotic environmental samples: N E > uncultured prokaryote: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AJ811966
1 UniProt : Q335P5
3 UniProt : Q335P5, A0A2D5RI68, A0A2E4T6H2
3 Interpro : Q335P5, A0A2D5RI68, A0A2E4T6H2
3 Pfam : Q335P5, A0A2D5RI68, A0A2E4T6H2
3 PIRSF : Q335P5, A0A2D5RI68, A0A2E4T6H2
3 SUPERFAM : Q335P5, A0A2D5RI68, A0A2E4T6H2
Sequence
Graphical view for this peptide sequence: 9zzzz-q335p5
Colored MSA for Carb_B_Bacteria (raw)
MKVELPQGGYQGLAGDGVVEFRGVPFALPPVGELRFKAPRPLPDSDRSVN
ADRYPLPSLQVKNPLMGVEDSGEDCLYLNIWVPEGEGPFPVMLWYHGGGY
IAGSVSQPLYNGAALAASQKVVVVHAAYRLGAHGFADFATIAPELEADSN
LGLRDQVAALEWVNRHIEAFGGRPDRVTLFGESAGGFSVATLMATPRARP
LFQAAIVQSGAGDFALAPEEVAKVTSAFVEALPGDGSAADKLRQADPKAW
IAAQNQALRTLVKRGLRDTTPQFAMNFQPMVDGDLLPRLPVDAIADGEAR
DIALMASVCRDEYHFFQYAGPMAGFPSVEELRRFDEAEILRRFQRALPQH
GQQALSYYQRTVTPDPQRSNMDWFSAMETDRLFRVPTLRLLDAQAAHRDD
TRGLQFTWTSQQFGVPMGACHVIDVPFVFGVTDTPAGMFFTGGGEPARAL
AAEVQKVWGDFAHGRAVQGPAWKDTRRVRQFGPGDAEAALLDADGEALWA
DIIPVPGTAKPGQGA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKVELPQGGYQGLAGDGVVEFRGVPFALPPVGELRFKAPRPLPDSDRSVN
ADRYPLPSLQVKNPLMGVEDSGEDCLYLNIWVPEGEGPFPVMLWYHGGGY
IAGSVSQPLYNGAALAASQKVVVVHAAYRLGAHGFADFATIAPELEADSN
LGLRDQVAALEWVNRHIEAFGGRPDRVTLFGESAGGFSVATLMATPRARP
LFQAAIVQSGAGDFALAPEEVAKVTSAFVEALPGDGSAADKLRQADPKAW
IAAQNQALRTLVKRGLRDTTPQFAMNFQPMVDGDLLPRLPVDAIADGEAR
DIALMASVCRDEYHFFQYAGPMAGFPSVEELRRFDEAEILRRFQRALPQH
GQQALSYYQRTVTPDPQRSNMDWFSAMETDRLFRVPTLRLLDAQAAHRDD
TRGLQFTWTSQQFGVPMGACHVIDVPFVFGVTDTPAGMFFTGGGEPARAL
AAEVQKVWGDFAHGRAVQGPAWKDTRRVRQFGPGDAEAALLDADGEALWA
DIIPVPGTAKPGQGA


Reference
    Title: Microbial enzymes mined from the Urania deep-sea hypersaline anoxic basin
    Ferrer M, Golyshina OV, Chernikova TN, Khachane AN, Martins dos Santos VA, Yakimov MM, Timmis KN, Golyshin PN
    Ref: Chemical Biology, 12:895, 2005 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer