Gene_Locus Report

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Gene_locus Report for: acicj-a5g2y8

Acidiphilium cryptum JF-5 putative poly-beta-hydroxyalkanoate synthase

Comment
Other strains: Acidiphilium cryptum (strain JF-5; DSM 11245 / JCM 8867 / AIU301)


Relationship
Family|PhaC_cen_dom
Block| X
Position in NCBI Life Tree|Acidiphilium cryptum JF-5
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Rhodospirillales: N E > Acetobacteraceae: N E > Acidiphilium: N E > Acidiphilium cryptum: N E > Acidiphilium cryptum JF-5: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AAOO01000006
2 UniProt : F0IXF6, A5G2Y8
2 UniProt : F0IXF6, A5G2Y8
2 Interpro : F0IXF6, A5G2Y8
2 Pfam : F0IXF6, A5G2Y8
2 PIRSF : F0IXF6, A5G2Y8
2 SUPERFAM : F0IXF6, A5G2Y8
Sequence
Graphical view for this peptide sequence: acicj-a5g2y8
Colored MSA for PhaC_cen_dom (raw)
MTTETSRSRTTGHAKPPAEAARARVSALPPPAPPASVAPNEPVSTTDALD
RSLHAAEARLTAGLAPAGIALAWRDWAVHLANQPTRRMDLARRAMEDWAA
VWRVAFGLEEAVTPPCDNDHRFDHPRWQDMPYRLYKEYFLRMERWWHDAA
TGIAGVDAAHERIVDFMIRQALDAVAPANLPMLNPEVEHAARESRGDSVR
AGLRNLLKDTEIALNQENRLPLAPGRDVAVTPGRVVYRNRLIELIQYSPV
TETVRPEPVLIVPAWIMKYYILDLSPENSLVRYLVGQGYTVFMISWHNPD
KEDRNLSLDDYRADGVMAALDAVSAITGARKIHATGYCLGGTLLSIAAAA
MARDHDSRLASVTLFAAQTDFTEAGELQLFITEAQLAFLEDLMWQQGYLD
TKQMAGAFQMLRSNDLIWSRMIRRYFIGEQEHPNDLMSWNMDATRMPYRM
HAEYLRHLFLHNDLAEGRLSAGGRPVAIGDIDVPFFVVGTERDHIAPWHS
VYKLHLLNRGPITFVLTSGGHNAGIVSEPGHPHRHYAILDRSPGEPYLAP
EAWQDEAPKHDGSWWPEWVAFLGARSGPPAAPPPLGREEAGYPVLGAAPG
HYIHER
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTTETSRSRTTGHAKPPAEAARARVSALPPPAPPASVAPNEPVSTTDALD
RSLHAAEARLTAGLAPAGIALAWRDWAVHLANQPTRRMDLARRAMEDWAA
VWRVAFGLEEAVTPPCDNDHRFDHPRWQDMPYRLYKEYFLRMERWWHDAA
TGIAGVDAAHERIVDFMIRQALDAVAPANLPMLNPEVEHAARESRGDSVR
AGLRNLLKDTEIALNQENRLPLAPGRDVAVTPGRVVYRNRLIELIQYSPV
TETVRPEPVLIVPAWIMKYYILDLSPENSLVRYLVGQGYTVFMISWHNPD
KEDRNLSLDDYRADGVMAALDAVSAITGARKIHATGYCLGGTLLSIAAAA
MARDHDSRLASVTLFAAQTDFTEAGELQLFITEAQLAFLEDLMWQQGYLD
TKQMAGAFQMLRSNDLIWSRMIRRYFIGEQEHPNDLMSWNMDATRMPYRM
HAEYLRHLFLHNDLAEGRLSAGGRPVAIGDIDVPFFVVGTERDHIAPWHS
VYKLHLLNRGPITFVLTSGGHNAGIVSEPGHPHRHYAILDRSPGEPYLAP
EAWQDEAPKHDGSWWPEWVAFLGARSGPPAAPPPLGREEAGYPVLGAAPG
HYIHER



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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