Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: acide-c5t1r9

Acidovorax delafieldii 2AN Putative uncharacterized protein

Relationship
Family|Duf_3141
Block| X
Position in NCBI Life Tree|Acidovorax delafieldii 2AN
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Betaproteobacteria: N E > Burkholderiales: N E > Comamonadaceae: N E > Acidovorax: N E > Acidovorax delafieldii: N E > Acidovorax delafieldii 2AN: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : ACQT01000013
1 UniProt : C5T1R9
1 UniProt : C5T1R9
1 Interpro : C5T1R9
1 Pfam : C5T1R9
1 PIRSF : C5T1R9
1 SUPERFAM : C5T1R9
Sequence
Graphical view for this peptide sequence: acide-c5t1r9
Colored MSA for Duf_3141 (raw)
MKTPTSPQKPRTSQRTTAGGKEAAVQGTHRQAEDLPPTVLDHSEELLKSA
PQDASSGMKRAAEAPSTQDYFDYQRDFFERTILFWDTLRQRANNMLEHER
AGLPPLLDFKYETLLDARSFDRPVNYALLRITEIDGHCWEDCVDSDKPPV
IIVDPRAGHGPGIGGFKRDSEVGMAMREGHPVYFVIFFPEPALGQTLADV
LHVLRRFVEEVALRHPGNPPVLYGNCQAGWAVTLLSADCAGLVGPVVLNG
SPLSYWAGESGVNPMRLSGGLLGGSWLAHLTADLGNGRFDGAWLAQNFEN
LKPEKAIWEKYAQLFTNVDSEQARFLEFERWWNGFYFLSREEILAIVENL
FIGNQLEQGVFQICLGCTADLRRIKNPIVIFASYGDNITPPHQALGWIPA
VYSDTEDLKRAGQRIVYLTNRHVGHLGIFVSAGVARLEHRAILESLAEIE
ALAPGLYEMKIDNPSGNPDCHKPTYSIRFESRQVEDLKTDYPQEAFERVK
QVSTFNEVLYRAFVSPWAQTLSTPWTAEVLKWLHPMRSSRYLFSETLNPW
MKGVSVLAEPLARSRQPLAPHHPLIEREREAAGQVTHALGRLREGRDAAV
EQAFRLMFQRPD
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKTPTSPQKPRTSQRTTAGGKEAAVQGTHRQAEDLPPTVLDHSEELLKSA
PQDASSGMKRAAEAPSTQDYFDYQRDFFERTILFWDTLRQRANNMLEHER
AGLPPLLDFKYETLLDARSFDRPVNYALLRITEIDGHCWEDCVDSDKPPV
IIVDPRAGHGPGIGGFKRDSEVGMAMREGHPVYFVIFFPEPALGQTLADV
LHVLRRFVEEVALRHPGNPPVLYGNCQAGWAVTLLSADCAGLVGPVVLNG
SPLSYWAGESGVNPMRLSGGLLGGSWLAHLTADLGNGRFDGAWLAQNFEN
LKPEKAIWEKYAQLFTNVDSEQARFLEFERWWNGFYFLSREEILAIVENL
FIGNQLEQGVFQICLGCTADLRRIKNPIVIFASYGDNITPPHQALGWIPA
VYSDTEDLKRAGQRIVYLTNRHVGHLGIFVSAGVARLEHRAILESLAEIE
ALAPGLYEMKIDNPSGNPDCHKPTYSIRFESRQVEDLKTDYPQEAFERVK
QVSTFNEVLYRAFVSPWAQTLSTPWTAEVLKWLHPMRSSRYLFSETLNPW
MKGVSVLAEPLARSRQPLAPHHPLIEREREAAGQVTHALGRLREGRDAAV
EQAFRLMFQRPD



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer